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The map label for this gene is 110635803

Identifier: 110635803

GI number: 110635803

Start: 3753398

End: 3753931

Strand: Reverse

Name: 110635803

Synonym: Meso_3475

Alternate gene names: NA

Gene position: 3753931-3753398 (Counterclockwise)

Preceding gene: 110635804

Following gene: 110635802

Centisome position: 85.08

GC content: 53.75

Gene sequence:

>534_bases
GTGACGGTGGCTAGCGGGACTAATGGAAAGGCTGTCGCGCGGCGTGCCACACTCTCACTGGTGATCGTTGCAGCGCTGAC
GGTGCTTCTTTTTGCGGCCGCGCCTGACGGGCTTTACCTTTGGATAAAGGCTTTTCATGTTGTCGCTGTGATCTCCTGGA
TGGCGGGAATGCTCTATCTGCCGCGGCTTTTCGTTTACCATTCTCAAGTCGAAACAGGCTCTGCTCAAAGCGAGACATTC
AAGATGATGGAGGTGCGGCTACTACGGTTCATCATCAATCCAGCCATGATCGCCACCTGGGTTTTGGGCCTTTGGCTCGC
TTGGAAGGGGTTCGATTTTTCAGGTGGGTGGCTGCACGCCAAGATAGGCCTGGTTCTGCTGTTATCAGCGTTTCATGGCT
ATCTGTCCCGTTCGCAGCGTATGTTCCAGGCGGATCGGAATCTCAAACCGACGCGTCACTGGCGCTTGATGAATGAGGTA
CCGACCGCTCTCATGATTCTCATTGTGATTTTGGTGATCGTGAAGCCTTTTTGA

Upstream 100 bases:

>100_bases
GCGGCGCGCCTTTCATCTTCAATCTTGGTCATGGAATTACGCCCGAGACGCCTATCGGGCATGTTGAGGCGATGATACAG
CAAGTGCGGGAGGGCAGACT

Downstream 100 bases:

>100_bases
CGGCGCGAGGCCCGCTTGTCTCACATCGACGCCGGTTTGATTGGAAACGAAAAACCCACCTTGCTCTTTCCGTGTCAGAG
CGATAAAAGGGCTTTTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTVASGTNGKAVARRATLSLVIVAALTVLLFAAAPDGLYLWIKAFHVVAVISWMAGMLYLPRLFVYHSQVETGSAQSETF
KMMEVRLLRFIINPAMIATWVLGLWLAWKGFDFSGGWLHAKIGLVLLLSAFHGYLSRSQRMFQADRNLKPTRHWRLMNEV
PTALMILIVILVIVKPF

Sequences:

>Translated_177_residues
MTVASGTNGKAVARRATLSLVIVAALTVLLFAAAPDGLYLWIKAFHVVAVISWMAGMLYLPRLFVYHSQVETGSAQSETF
KMMEVRLLRFIINPAMIATWVLGLWLAWKGFDFSGGWLHAKIGLVLLLSAFHGYLSRSQRMFQADRNLKPTRHWRLMNEV
PTALMILIVILVIVKPF
>Mature_176_residues
TVASGTNGKAVARRATLSLVIVAALTVLLFAAAPDGLYLWIKAFHVVAVISWMAGMLYLPRLFVYHSQVETGSAQSETFK
MMEVRLLRFIINPAMIATWVLGLWLAWKGFDFSGGWLHAKIGLVLLLSAFHGYLSRSQRMFQADRNLKPTRHWRLMNEVP
TALMILIVILVIVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 19887; Mature: 19756

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVASGTNGKAVARRATLSLVIVAALTVLLFAAAPDGLYLWIKAFHVVAVISWMAGMLYL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PRLFVYHSQVETGSAQSETFKMMEVRLLRFIINPAMIATWVLGLWLAWKGFDFSGGWLHA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
KIGLVLLLSAFHGYLSRSQRMFQADRNLKPTRHWRLMNEVPTALMILIVILVIVKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVASGTNGKAVARRATLSLVIVAALTVLLFAAAPDGLYLWIKAFHVVAVISWMAGMLYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PRLFVYHSQVETGSAQSETFKMMEVRLLRFIINPAMIATWVLGLWLAWKGFDFSGGWLHA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
KIGLVLLLSAFHGYLSRSQRMFQADRNLKPTRHWRLMNEVPTALMILIVILVIVKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]