Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 110635796

GI number: 110635796

Start: 3744116

End: 3744982

Strand: Reverse

Name: parB [H]

Synonym: Meso_3468

Alternate gene names: 110635796

Gene position: 3744982-3744116 (Counterclockwise)

Preceding gene: 110635797

Following gene: 110635789

Centisome position: 84.87

GC content: 60.21

Gene sequence:

>867_bases
ATGAATGAAGATCCTTCTCGCAAGCGCCTTGGCCGCGGCCTCGCCGCCCTTATTGGCGAAATCGACAGACCGGTTATGCG
CGAGCAGGAAACCGTGCGCGCGGACCGTTTGGTGCCGATCGAATTTATTTCGCCGAATCCGCGCAATCCGCGGCGCAATT
TTGCCGAGGGGGATCTGGCGGAGCTGGCACACTCGATCCGAGAGCATGGCATCGTTCAGCCGGTGGTGGTGCGACCGGCG
CCCGCTGCCGGGCGATACGAGATCATAGCAGGAGAGCGCCGCTGGCGTGCCGCGCAGAAAGCAGGTCTCACGGAAATACC
CGTCATTATTCGCGAGGTGGACGACAGGGCGGCGCTCGAACTGGCCATTATCGAGAATGTCCAGCGCGCCGATCTCAATC
CAATCGAGGAGGCGCGCGGCTACCAGCAGCTTATGGATGAACATAACTACACCCAGGCGGATCTTGCGCAGGTCATCGGC
AAGAGCCGCAGTCATGTAGCAAACACCCTGCGCCTTCTAAAGCTGCCTGATGCGGTGCTCGATCTTATTGTCGACGGCTC
GCTAACCGCGGGCCATGCACGAACCCTGGTAACCGCCGCCGATCCCGCCGGCCTTGCAAAGCGTATCATCGAGGAGGGAT
TGTCCGTTCGCCAGGCTGAGGCGCTGGCAAGCGCACAGGAGGTGGGTGTTACAAAGCCAAAAGAGCGCAGGGAGAAGGAT
GCGGACACGCTTTCGCTTGAAAAGCTCCTCACGGATCACACTGGTCTGAAAGTTTCGATCAGCCATAAGGATCGGGGCGG
GGAGATGCGTATTTCCTACCGCTCTCTGGAGCAACTGGACGAGCTCTGCCGCTTGTTGCAGCGCTGA

Upstream 100 bases:

>100_bases
GGCAGCCAAGCATACCTGCAACTCGCCTCGGAAGTGATCCGCAGGGAGCGGCGTTTGCGCGCCGCTTGATTTGTTCGAAC
TAAAGGAGCCAGGCTCAGCC

Downstream 100 bases:

>100_bases
TAGCCCCGAGTAATCGACACTTCTGCCGGTCACTCGCTACACGAATGGTCGTGCAACCCTGTATTTGCGGGGCACCAGCC
TGGAAAGATAGTTCCGGCAA

Product: chromosome segregation DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRADRLVPIEFISPNPRNPRRNFAEGDLAELAHSIREHGIVQPVVVRPA
PAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDRAALELAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIG
KSRSHVANTLRLLKLPDAVLDLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALASAQEVGVTKPKERREKD
ADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLLQR

Sequences:

>Translated_288_residues
MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRADRLVPIEFISPNPRNPRRNFAEGDLAELAHSIREHGIVQPVVVRPA
PAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDRAALELAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIG
KSRSHVANTLRLLKLPDAVLDLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALASAQEVGVTKPKERREKD
ADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLLQR
>Mature_288_residues
MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRADRLVPIEFISPNPRNPRRNFAEGDLAELAHSIREHGIVQPVVVRPA
PAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDRAALELAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIG
KSRSHVANTLRLLKLPDAVLDLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALASAQEVGVTKPKERREKD
ADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLLQR

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32013; Mature: 32013

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRADRLVPIEFISPNPRNPRRNFAEGDLA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHH
ELAHSIREHGIVQPVVVRPAPAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDRAALE
HHHHHHHHCCCCCCEEECCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
LAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIGKSRSHVANTLRLLKLPDAVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
DLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALASAQEVGVTKPKERREKD
HHHHCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLLQR
HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEDPSRKRLGRGLAALIGEIDRPVMREQETVRADRLVPIEFISPNPRNPRRNFAEGDLA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHH
ELAHSIREHGIVQPVVVRPAPAAGRYEIIAGERRWRAAQKAGLTEIPVIIREVDDRAALE
HHHHHHHHCCCCCCEEECCCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
LAIIENVQRADLNPIEEARGYQQLMDEHNYTQADLAQVIGKSRSHVANTLRLLKLPDAVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
DLIVDGSLTAGHARTLVTAADPAGLAKRIIEEGLSVRQAEALASAQEVGVTKPKERREKD
HHHHCCCCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ADTLSLEKLLTDHTGLKVSISHKDRGGEMRISYRSLEQLDELCRLLQR
HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]