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The map label for this gene is ybeB [H]

Identifier: 110635782

GI number: 110635782

Start: 3732149

End: 3732601

Strand: Reverse

Name: ybeB [H]

Synonym: Meso_3454

Alternate gene names: 110635782

Gene position: 3732601-3732149 (Counterclockwise)

Preceding gene: 110635783

Following gene: 229259626

Centisome position: 84.59

GC content: 56.73

Gene sequence:

>453_bases
GTGATTGCTGCGCGGTCTCGTTGTTCTTATTGGAAAGGAAAGACACTGAGAACAGCACTGCAGAAGAAGGCAGCAATTGT
GCCTTCGCCGGCCGGGACACGTGAAGATAGCCTGTCTCGCGCCCTAGAAACAGCGCTCCAGAGTCTGGAAGACTCGAAGG
CGGAAAACATCGTTCCCATCGACATTCAAGGCAAGTCTCCGCTGGCAGACTACATGATCGTAGCTTCTGGCCGGTCCCAC
CGTCATGTCGCAGCGGTATCGGAGCATCTTATCCGCGCCTTGAAGGATGCCGGCTTCGGCAACGCACGCGTCGAAGGCCT
GTCAGGCGCCGACTGGGTGTTGATCGACGCGGGTGACATTGTCGTCCACGTGTTTCGCCCGGAGGTCCGAGAGTTCTATA
ACATCGAAAAGATGTGGCAGACTCCGGATCTGGAGGACGAGACGCTCCATTAA

Upstream 100 bases:

>100_bases
TGCAGAGGAACACCTTTTCTTTACCGGAGTTTCCTCTTCGCAGCGCAGAAGCTGTCTTGAAACTGACAAGCTTGTCTGAC
TATCTATAGGTTGTCGCGCA

Downstream 100 bases:

>100_bases
GCGGTCGCGGCTTTGCTGAGAGCCCGCCGGCTCCCTCCGGCTGGCGAGGCCGCTGCAGCTGCTGAGGCGAATGGAATTCG
CCATATTCGCGGTTCCGATT

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIAARSRCSYWKGKTLRTALQKKAAIVPSPAGTREDSLSRALETALQSLEDSKAENIVPIDIQGKSPLADYMIVASGRSH
RHVAAVSEHLIRALKDAGFGNARVEGLSGADWVLIDAGDIVVHVFRPEVREFYNIEKMWQTPDLEDETLH

Sequences:

>Translated_150_residues
MIAARSRCSYWKGKTLRTALQKKAAIVPSPAGTREDSLSRALETALQSLEDSKAENIVPIDIQGKSPLADYMIVASGRSH
RHVAAVSEHLIRALKDAGFGNARVEGLSGADWVLIDAGDIVVHVFRPEVREFYNIEKMWQTPDLEDETLH
>Mature_150_residues
MIAARSRCSYWKGKTLRTALQKKAAIVPSPAGTREDSLSRALETALQSLEDSKAENIVPIDIQGKSPLADYMIVASGRSH
RHVAAVSEHLIRALKDAGFGNARVEGLSGADWVLIDAGDIVVHVFRPEVREFYNIEKMWQTPDLEDETLH

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=109, Percent_Identity=28.4403669724771, Blast_Score=66, Evalue=1e-11,
Organism=Escherichia coli, GI87081768, Length=95, Percent_Identity=38.9473684210526, Blast_Score=95, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19923046, Length=101, Percent_Identity=31.6831683168317, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 16580; Mature: 16580

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAARSRCSYWKGKTLRTALQKKAAIVPSPAGTREDSLSRALETALQSLEDSKAENIVPI
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
DIQGKSPLADYMIVASGRSHRHVAAVSEHLIRALKDAGFGNARVEGLSGADWVLIDAGDI
EECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECCCE
VVHVFRPEVREFYNIEKMWQTPDLEDETLH
EEEEECHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIAARSRCSYWKGKTLRTALQKKAAIVPSPAGTREDSLSRALETALQSLEDSKAENIVPI
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE
DIQGKSPLADYMIVASGRSHRHVAAVSEHLIRALKDAGFGNARVEGLSGADWVLIDAGDI
EECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCEEEEECCCE
VVHVFRPEVREFYNIEKMWQTPDLEDETLH
EEEEECHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]