| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635741
Identifier: 110635741
GI number: 110635741
Start: 3688026
End: 3690227
Strand: Reverse
Name: 110635741
Synonym: Meso_3413
Alternate gene names: NA
Gene position: 3690227-3688026 (Counterclockwise)
Preceding gene: 110635743
Following gene: 110635737
Centisome position: 83.63
GC content: 62.26
Gene sequence:
>2202_bases ATGGGACGTCCTTCACTGCTTTACGCGCTTGCCGCAACGCTTTCGCTTTCAACTTCAATTCCCGCGTTCGCGCAGCAAGC TTTCAACCGCATTGCGACATTTCCGGTCGCCGAGAACCTGCCGGCCGACATGGACCCGGCGACTCCGACCTCGTCGGAAA TCATCACCGCAAGCGAAGACGGCAACATCCTCATCTATTCCGACAGTCCGCTGGGCGCTGTCGGCTTCGTTGACATCAGC GACGCCAAGGCACCGAAAGCCGGCGGCGTGATCAAGGTGGAGGGCGAGCCAACCTCCGTCACGGTGCTGGGCGGCAAGGC TTTCGCGGCCGTCAACACCTCGGAGAGCTATACGAATCCCTCCGGCAAGCTGCTCGTGATCGATATTGCCGCGAAGACGG CCGAAGAGGCCTGCACGCTCGCCGGCCAGCCGGATTCCATCGCCGTCAGCAAAGACAAGCGCTTCCTCGCGATCGCCATC GAAAACGAGCGCGACGAGGATGTGAACGACGGCGCCATCCCGCAGATGCCGGCGGGTAGCCTGCAGATCGTGCCGCTCGC GGACGGCATGCCCGATTGCGATGGCATCAAGACCGTGGATGTAACCGGCCTTGCCGAGGTGGCGCCGGAGGATCCCGAGC CTGAATTTGTCGCCTTCAACGAAGCGGGCGAGATCGCGCTGACGCTGCAGGAGAACAATCACATCGTCATCGTCTCGGCC GAGACCGGCGAGGTTGTCGGCCATTTTTCCGCCGGCAGCACGAGTGTCGAAAAGATCGACATGCTCGACGACGGCGCGCT GCGCTTTGACCAGAAGGCGGAAAACCTGCTGCGTGAACCCGACGCCGTGAAGTGGCTCGACAATGATCGCCTCGTGGTCG CCAACGAAGGCGATTACGAGGGTGGCTCGCGAAGCTTCACCATCTTCTCGTCGGCAGGCGAGGTGCTCTACGATTCGGGC GCCGACCTGGATCAGCAAGCAGCCCTCGTCGGCAATTATCCTGACAAGCGTTCCGACGCGAAGGGCGTAGAGCCGGAAGG CATCGAGGTCGCTACCTATGGCGGCCAGCAATACATATTCGTCGCTGAGGAGCGTTCTTCGCTGGTAGCGGTCTACCGCG ACACGGGTGCCGCGCCGGAGTTCGTTCAGGTTCTGCCCTCCGGCATCGGGCCGGAAGGTGTCGTCGCCATTCCCCAGCGC AATCTGCTGGTGACCGCCAACGAGACGGATCTGGTGGAAGATGGCGGCGCTCGCTCGCATGTAATGCTCTATGAGCTCGG CGAAGGCGCGCCTGTCTATCCGATGATCAGGTCGGTCATGGTCGACGGGCAGCCGATCGGTTGGGGCGCGCTTTCCGCAC TCGCGGCCGACCCGTCGCAGCCCGGCCATCTCTACGCGGCCTCCGACTCGGTCTATGGCGGCGAGCCCGCCGTCTTCGTG ATCGACGCTACCAAGACGCCCGCCGAAATCACGCGCAAGATCGTCGTCAAACGCGGTAATGCCCCAGCTCAGAAGCTCGA CATCGAAGGTCTCGTGGCGGATGGCGAGGGTGGCTTCTGGCTTGCTTCGGAGGGATATAGTCAGCGGCTCATCCCGCACG CCCTCTACCATGTGGATGCGGACGGGATGATCGATGAAGAGATTGGTCTTCCCGCCGAGCTTCTGGCGCATGAAGAGCGC TACGGCTTCGAGGGCATCACCATCGTCGGAGAAGGCGAGGATCGCATGCTGGTGATGGCTGTCCAGCGTGAGTGGAAGGA CGATCCCAAGAACCAGGTGAAGCTTGTTGCCTACAAACCCGTTTCCAAGGAGTGGTCGGCCGTGCGCTACCCGCTCGATG CCGCGGAGAAGGGCTGGGTCGGCCTGTCGGAGATCACCGCCCACGGAGGCGCGCTGTACATCATCGAACGCGATAATCAG ATCGGTACAGCGGCCAGGAACAAGCGGCTGTACAAGGTCGCGCTCGACGGCTTCAAGCCGGCTCCGCTCGGCGGCGACCT GCCGGTGGTGGAGAAGACGCTTGTCCGCGACCTGATCGAGGACATCCGCTCCGCCAGCAACGGCTATGTCGTGGACAAGG TTGAAGGCTTCACCATTGATGCCGAAGGTCAGGCCTATTTCGTCACCGACAATGATGGCGTGGACGATTCCTCAGGTGAG ACGATCTTCGTCAACCTTGGCCGGCTGGATGCGGTCAATTGA
Upstream 100 bases:
>100_bases GCATTGAGCAAATCCGTCATCGGACTTTCATCGTTCCGTCACGACGCTGCAATCCTCGTCCTCCAATAGGCAGTATTCCA ACCGATTGACGGAGATGGGG
Downstream 100 bases:
>100_bases GCCTGGTCAGGGGTGGTGATCGTCACCACCCCTGCCAACCCTCGATTGGTGCGCCTCAGCTCGTGCTGTTCTTGCGGGGC AGGATCCGCGTGAAATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Endonuclease/Exonuclease/Phosphatase; Alkaline Phosphatase-Like Protein; Alkaline Phosphatase Protein; Atypical Alkaline Phosphatase With Phytase-Like Insertion; Metallophosphoesterase
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MGRPSLLYALAATLSLSTSIPAFAQQAFNRIATFPVAENLPADMDPATPTSSEIITASEDGNILIYSDSPLGAVGFVDIS DAKAPKAGGVIKVEGEPTSVTVLGGKAFAAVNTSESYTNPSGKLLVIDIAAKTAEEACTLAGQPDSIAVSKDKRFLAIAI ENERDEDVNDGAIPQMPAGSLQIVPLADGMPDCDGIKTVDVTGLAEVAPEDPEPEFVAFNEAGEIALTLQENNHIVIVSA ETGEVVGHFSAGSTSVEKIDMLDDGALRFDQKAENLLREPDAVKWLDNDRLVVANEGDYEGGSRSFTIFSSAGEVLYDSG ADLDQQAALVGNYPDKRSDAKGVEPEGIEVATYGGQQYIFVAEERSSLVAVYRDTGAAPEFVQVLPSGIGPEGVVAIPQR NLLVTANETDLVEDGGARSHVMLYELGEGAPVYPMIRSVMVDGQPIGWGALSALAADPSQPGHLYAASDSVYGGEPAVFV IDATKTPAEITRKIVVKRGNAPAQKLDIEGLVADGEGGFWLASEGYSQRLIPHALYHVDADGMIDEEIGLPAELLAHEER YGFEGITIVGEGEDRMLVMAVQREWKDDPKNQVKLVAYKPVSKEWSAVRYPLDAAEKGWVGLSEITAHGGALYIIERDNQ IGTAARNKRLYKVALDGFKPAPLGGDLPVVEKTLVRDLIEDIRSASNGYVVDKVEGFTIDAEGQAYFVTDNDGVDDSSGE TIFVNLGRLDAVN
Sequences:
>Translated_733_residues MGRPSLLYALAATLSLSTSIPAFAQQAFNRIATFPVAENLPADMDPATPTSSEIITASEDGNILIYSDSPLGAVGFVDIS DAKAPKAGGVIKVEGEPTSVTVLGGKAFAAVNTSESYTNPSGKLLVIDIAAKTAEEACTLAGQPDSIAVSKDKRFLAIAI ENERDEDVNDGAIPQMPAGSLQIVPLADGMPDCDGIKTVDVTGLAEVAPEDPEPEFVAFNEAGEIALTLQENNHIVIVSA ETGEVVGHFSAGSTSVEKIDMLDDGALRFDQKAENLLREPDAVKWLDNDRLVVANEGDYEGGSRSFTIFSSAGEVLYDSG ADLDQQAALVGNYPDKRSDAKGVEPEGIEVATYGGQQYIFVAEERSSLVAVYRDTGAAPEFVQVLPSGIGPEGVVAIPQR NLLVTANETDLVEDGGARSHVMLYELGEGAPVYPMIRSVMVDGQPIGWGALSALAADPSQPGHLYAASDSVYGGEPAVFV IDATKTPAEITRKIVVKRGNAPAQKLDIEGLVADGEGGFWLASEGYSQRLIPHALYHVDADGMIDEEIGLPAELLAHEER YGFEGITIVGEGEDRMLVMAVQREWKDDPKNQVKLVAYKPVSKEWSAVRYPLDAAEKGWVGLSEITAHGGALYIIERDNQ IGTAARNKRLYKVALDGFKPAPLGGDLPVVEKTLVRDLIEDIRSASNGYVVDKVEGFTIDAEGQAYFVTDNDGVDDSSGE TIFVNLGRLDAVN >Mature_732_residues GRPSLLYALAATLSLSTSIPAFAQQAFNRIATFPVAENLPADMDPATPTSSEIITASEDGNILIYSDSPLGAVGFVDISD AKAPKAGGVIKVEGEPTSVTVLGGKAFAAVNTSESYTNPSGKLLVIDIAAKTAEEACTLAGQPDSIAVSKDKRFLAIAIE NERDEDVNDGAIPQMPAGSLQIVPLADGMPDCDGIKTVDVTGLAEVAPEDPEPEFVAFNEAGEIALTLQENNHIVIVSAE TGEVVGHFSAGSTSVEKIDMLDDGALRFDQKAENLLREPDAVKWLDNDRLVVANEGDYEGGSRSFTIFSSAGEVLYDSGA DLDQQAALVGNYPDKRSDAKGVEPEGIEVATYGGQQYIFVAEERSSLVAVYRDTGAAPEFVQVLPSGIGPEGVVAIPQRN LLVTANETDLVEDGGARSHVMLYELGEGAPVYPMIRSVMVDGQPIGWGALSALAADPSQPGHLYAASDSVYGGEPAVFVI DATKTPAEITRKIVVKRGNAPAQKLDIEGLVADGEGGFWLASEGYSQRLIPHALYHVDADGMIDEEIGLPAELLAHEERY GFEGITIVGEGEDRMLVMAVQREWKDDPKNQVKLVAYKPVSKEWSAVRYPLDAAEKGWVGLSEITAHGGALYIIERDNQI GTAARNKRLYKVALDGFKPAPLGGDLPVVEKTLVRDLIEDIRSASNGYVVDKVEGFTIDAEGQAYFVTDNDGVDDSSGET IFVNLGRLDAVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77832; Mature: 77700
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPSLLYALAATLSLSTSIPAFAQQAFNRIATFPVAENLPADMDPATPTSSEIITASED CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCC GNILIYSDSPLGAVGFVDISDAKAPKAGGVIKVEGEPTSVTVLGGKAFAAVNTSESYTNP CCEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCC SGKLLVIDIAAKTAEEACTLAGQPDSIAVSKDKRFLAIAIENERDEDVNDGAIPQMPAGS CCCEEEEEECCCCCHHHHEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCC LQIVPLADGMPDCDGIKTVDVTGLAEVAPEDPEPEFVAFNEAGEIALTLQENNHIVIVSA EEEEECCCCCCCCCCEEEEEECCHHHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEC ETGEVVGHFSAGSTSVEKIDMLDDGALRFDQKAENLLREPDAVKWLDNDRLVVANEGDYE CCCCEEEEECCCCCCEEEEEECCCCCEECCHHHHHHHCCCCCEEEECCCEEEEECCCCCC GGSRSFTIFSSAGEVLYDSGADLDQQAALVGNYPDKRSDAKGVEPEGIEVATYGGQQYIF CCCEEEEEEECCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCEEEEEECCEEEEE VAEERSSLVAVYRDTGAAPEFVQVLPSGIGPEGVVAIPQRNLLVTANETDLVEDGGARSH EEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEECCCCCCCE VMLYELGEGAPVYPMIRSVMVDGQPIGWGALSALAADPSQPGHLYAASDSVYGGEPAVFV EEEEECCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEE IDATKTPAEITRKIVVKRGNAPAQKLDIEGLVADGEGGFWLASEGYSQRLIPHALYHVDA EECCCCHHHHHHEEEEECCCCCHHHEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECC DGMIDEEIGLPAELLAHEERYGFEGITIVGEGEDRMLVMAVQREWKDDPKNQVKLVAYKP CCCCCHHCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHCCCCCCCCEEEEEECC VSKEWSAVRYPLDAAEKGWVGLSEITAHGGALYIIERDNQIGTAARNKRLYKVALDGFKP CCCCCCEEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHCCEEEEEEECCCCC APLGGDLPVVEKTLVRDLIEDIRSASNGYVVDKVEGFTIDAEGQAYFVTDNDGVDDSSGE CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCEEEEECCCCCCCCCCC TIFVNLGRLDAVN EEEEECCCEECCC >Mature Secondary Structure GRPSLLYALAATLSLSTSIPAFAQQAFNRIATFPVAENLPADMDPATPTSSEIITASED CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCC GNILIYSDSPLGAVGFVDISDAKAPKAGGVIKVEGEPTSVTVLGGKAFAAVNTSESYTNP CCEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCEEEEEEECCCCCCCC SGKLLVIDIAAKTAEEACTLAGQPDSIAVSKDKRFLAIAIENERDEDVNDGAIPQMPAGS CCCEEEEEECCCCCHHHHEECCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCC LQIVPLADGMPDCDGIKTVDVTGLAEVAPEDPEPEFVAFNEAGEIALTLQENNHIVIVSA EEEEECCCCCCCCCCEEEEEECCHHHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEC ETGEVVGHFSAGSTSVEKIDMLDDGALRFDQKAENLLREPDAVKWLDNDRLVVANEGDYE CCCCEEEEECCCCCCEEEEEECCCCCEECCHHHHHHHCCCCCEEEECCCEEEEECCCCCC GGSRSFTIFSSAGEVLYDSGADLDQQAALVGNYPDKRSDAKGVEPEGIEVATYGGQQYIF CCCEEEEEEECCCCEEECCCCCCCCCHHEECCCCCCCCCCCCCCCCCEEEEEECCEEEEE VAEERSSLVAVYRDTGAAPEFVQVLPSGIGPEGVVAIPQRNLLVTANETDLVEDGGARSH EEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCEEEEECCCCEECCCCCCCE VMLYELGEGAPVYPMIRSVMVDGQPIGWGALSALAADPSQPGHLYAASDSVYGGEPAVFV EEEEECCCCCCHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEE IDATKTPAEITRKIVVKRGNAPAQKLDIEGLVADGEGGFWLASEGYSQRLIPHALYHVDA EECCCCHHHHHHEEEEECCCCCHHHEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECC DGMIDEEIGLPAELLAHEERYGFEGITIVGEGEDRMLVMAVQREWKDDPKNQVKLVAYKP CCCCCHHCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHCCCCCCCCEEEEEECC VSKEWSAVRYPLDAAEKGWVGLSEITAHGGALYIIERDNQIGTAARNKRLYKVALDGFKP CCCCCCEEECCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHCCEEEEEEECCCCC APLGGDLPVVEKTLVRDLIEDIRSASNGYVVDKVEGFTIDAEGQAYFVTDNDGVDDSSGE CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCEEEEECCCCCCCCCCC TIFVNLGRLDAVN EEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA