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The map label for this gene is rpmJ

Identifier: 110635587

GI number: 110635587

Start: 3521811

End: 3521936

Strand: Reverse

Name: rpmJ

Synonym: Meso_3258

Alternate gene names: 110635587

Gene position: 3521936-3521811 (Counterclockwise)

Preceding gene: 110635592

Following gene: 110635586

Centisome position: 79.82

GC content: 57.14

Gene sequence:

>126_bases
ATGAAGATCAGAAACTCGCTCAAAGCGTTGAAGGGCCGTCACCGCGAGAACCGCATGGTTCGCCGCAAGGGCCGCATCTA
CATCATCAACAAGTCGAACCCGCGCTATAAGGCCCGTCAGGGCTGA

Upstream 100 bases:

>100_bases
ATGTGCCCCATCGGATTTTGGCGCGCCAAGAGGGCGCGTCTTTCGTTTCGGCCGAATGGCCACAACTCTTTTCGGCCGTC
GGGCCGCAACGGGCAAGACA

Downstream 100 bases:

>100_bases
TCCCTCTGGGTGAGGCAAGAGGCCTCACGCGGTTTTTGCTTTTATCCAGGCGTGAAGGCAGGTATTCTGCCCCCATGCGT
TTTCTCGTCCTGTTCGTACC

Product: 50S ribosomal protein L36P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKIRNSLKALKGRHRENRMVRRKGRIYIINKSNPRYKARQG

Sequences:

>Translated_41_residues
MKIRNSLKALKGRHRENRMVRRKGRIYIINKSNPRYKARQG
>Mature_41_residues
MKIRNSLKALKGRHRENRMVRRKGRIYIINKSNPRYKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_MESSB (Q11D95)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_675795.1
- ProteinModelPortal:   Q11D95
- SMR:   Q11D95
- STRING:   Q11D95
- GeneID:   4183231
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_3258
- eggNOG:   COG0257
- HOGENOM:   HBG734088
- BioCyc:   MSP266779:MESO_3258-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4995; Mature: 4995

Theoretical pI: Translated: 12.62; Mature: 12.62

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRNSLKALKGRHRENRMVRRKGRIYIINKSNPRYKARQG
CCCHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKIRNSLKALKGRHRENRMVRRKGRIYIINKSNPRYKARQG
CCCHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA