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The map label for this gene is 110635586

Identifier: 110635586

GI number: 110635586

Start: 3521152

End: 3521736

Strand: Reverse

Name: 110635586

Synonym: Meso_3257

Alternate gene names: NA

Gene position: 3521736-3521152 (Counterclockwise)

Preceding gene: 110635587

Following gene: 110635583

Centisome position: 79.81

GC content: 59.15

Gene sequence:

>585_bases
ATGCGTTTTCTCGTCCTGTTCGTACCCATTGCTGCGCTGTTGCTCTCGCCAGCCTATGCGGAAGCTCCTGCCTCACAGGA
ATCTTCGGCTGAGCAGCCGAACCGGCAGGGACGCCTCGATGAGCTCTTTTCCGATCTCAGGCAAGAGCGCAACGAGGCTT
CAGCGCGCCGCATCGCCAACCGCATCCGTGAAGAGTGGCAGCGTTCCGGCGGCGCCACGGCTGACGTGCTCATCGAATGG
GCGCATAAAGCGGCTGGAGAGAAGAAATTCCATGTGGCCCTCGACCTGCTCGACCAGGCGGTCACGCTCTATCCCCAATA
TGTGGAGAGCTGGAACAACCGTGCGCTCGTTTATCTGATGATGAACGATTTCGACCGGGCCATGTCCGATCTCTCACATG
TGCTTTCGATCGAACCACGGCATTTCGGAGCAATGAGCGGTTTGGCGGGTATTCTGCGTGTCACGGGGCGCGAGGATCGG
GCGCTCGAAATCTATCGCCGGATGCTTGAAATCTACCCCATGCAGCGTAGCGCGCAACGAGCCTTGCTGGACCTCACCGA
CAAGACGACCGATGAGCGCCTATAG

Upstream 100 bases:

>100_bases
CGCGCTATAAGGCCCGTCAGGGCTGATCCCTCTGGGTGAGGCAAGAGGCCTCACGCGGTTTTTGCTTTTATCCAGGCGTG
AAGGCAGGTATTCTGCCCCC

Downstream 100 bases:

>100_bases
CTTCGTTTTGTAATTCTGGACGTTGGCGATTGGTGTAGAGGCCGATCCCCGCCCTGCTTACGCTTGTTCAGGCTTCCCGC
CTGCCGGGAGCGCTTCCTTA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRFLVLFVPIAALLLSPAYAEAPASQESSAEQPNRQGRLDELFSDLRQERNEASARRIANRIREEWQRSGGATADVLIEW
AHKAAGEKKFHVALDLLDQAVTLYPQYVESWNNRALVYLMMNDFDRAMSDLSHVLSIEPRHFGAMSGLAGILRVTGREDR
ALEIYRRMLEIYPMQRSAQRALLDLTDKTTDERL

Sequences:

>Translated_194_residues
MRFLVLFVPIAALLLSPAYAEAPASQESSAEQPNRQGRLDELFSDLRQERNEASARRIANRIREEWQRSGGATADVLIEW
AHKAAGEKKFHVALDLLDQAVTLYPQYVESWNNRALVYLMMNDFDRAMSDLSHVLSIEPRHFGAMSGLAGILRVTGREDR
ALEIYRRMLEIYPMQRSAQRALLDLTDKTTDERL
>Mature_194_residues
MRFLVLFVPIAALLLSPAYAEAPASQESSAEQPNRQGRLDELFSDLRQERNEASARRIANRIREEWQRSGGATADVLIEW
AHKAAGEKKFHVALDLLDQAVTLYPQYVESWNNRALVYLMMNDFDRAMSDLSHVLSIEPRHFGAMSGLAGILRVTGREDR
ALEIYRRMLEIYPMQRSAQRALLDLTDKTTDERL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22191; Mature: 22191

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLVLFVPIAALLLSPAYAEAPASQESSAEQPNRQGRLDELFSDLRQERNEASARRIAN
CCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIREEWQRSGGATADVLIEWAHKAAGEKKFHVALDLLDQAVTLYPQYVESWNNRALVYLM
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
MNDFDRAMSDLSHVLSIEPRHFGAMSGLAGILRVTGREDRALEIYRRMLEIYPMQRSAQR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH
ALLDLTDKTTDERL
HHHHHHCCCCCCCC
>Mature Secondary Structure
MRFLVLFVPIAALLLSPAYAEAPASQESSAEQPNRQGRLDELFSDLRQERNEASARRIAN
CCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIREEWQRSGGATADVLIEWAHKAAGEKKFHVALDLLDQAVTLYPQYVESWNNRALVYLM
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
MNDFDRAMSDLSHVLSIEPRHFGAMSGLAGILRVTGREDRALEIYRRMLEIYPMQRSAQR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHH
ALLDLTDKTTDERL
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA