Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110635529

Identifier: 110635529

GI number: 110635529

Start: 3469608

End: 3471044

Strand: Reverse

Name: 110635529

Synonym: Meso_3200

Alternate gene names: NA

Gene position: 3471044-3469608 (Counterclockwise)

Preceding gene: 110635530

Following gene: 110635528

Centisome position: 78.66

GC content: 65.55

Gene sequence:

>1437_bases
ATGGCCAAGACACCGAGGACGCGCCACTCCAAGTCGAGCCGCGAGCCCGTGACGATCGACCTGGAGGCCGAGCCTGTCCA
TCGTGAGCCGACTCCTATGGAAGAGGTGTCGTCGGGCGGAGAATCGGCCAGCTCCGAGGAGTTTTCCGGCCAGGATCCGG
TTGATCAGGCATCTTCGAACATGACGGGTATAGGTGCGGATGAGTCTGCCCGTGAGGAAGCCCAGCCTGCGATGGAAGCC
GGTTCAGACTCCGTGTCACAGTCGCAGCCCCAGGAAGATGAGCCCCTTCAGCCGGATGAAGCACGTGCCGATATGGAGGC
ACCGGCTGAGGAGCCGGCCTCCGAAGAGCAGACCCGAGCGCCGGTTCGGAGCCGCGGCGGCTTCGCAAACGCGTTTGTCG
GTGGCCTTCTGGGCGCGCTGATCATGCTCCTGATCGGGGGAGCATTGCTCTGGACGGGAGTTCTTCCCGGAACGCGGCAG
CAGCAAGCCGATCCCGCCATGAGCAATCTGGAGCAGCAGGTTGCCGCTCTGCAAAATGAGATTTCCCAATTGCGCGAGAA
TGCCGCAGCGGGACCTTCCGCTGAAGCGTTGCAACAGGCACTTGCCGAGCCGCGGCAGCAGATCAGCGAATTGCGCGACA
CGGTCGCAGCCCTGCAATCCGCTCCGCCGGCTGAAAATGGCGCGGAACTGCAGCGGCTGGGGCAGCAGCTTGCTGAGCTT
GAGAACCGGGTGGCTTCGGTCGCGCAGACGGCCGGCACCGGCGATACTTCCCAGCTTTCGCAGCAGGTGAGCGAACTTGA
AATGCGCGTCGCCGGGGCCATGGAAGCCGCCAACACCGCACAGGAAAGGGGTGCGGCGACGGCGCAGCAGGTGAATGAGC
TGGCGCGCCAAGTCACGCAGCTCAGCGAGCAAGTGGCCAAGGAGGATGAAGGGCCGAGACTCGCGCTCATCGTGGCCGCG
TCCGCCCTGCGTTCCGCGGTGGAGCGTGGTGCGCCTTTTGGAAGCGAGCTGGATACCTATTCCGCCATCGCGCCCAATGC
GCCCGAACTCGACCCGCTCAGGCCCTATGCACAGACGGGCATTCCCACCGAAGCCGCCCTTGTCAGCGAGGCGCCGCAGA
TCGCATCGCGGATTGCCGCATCCTCATCCGATCTGCCACCCGATGCCGGCGTTTTCGATCGCCTGATGGCGAGCGCGCGC
TCTGCTGTAACGGTCCGGCCGGTCGGCGAGGTGCCGGGGGATACGCCGGAGGCGATCGCCGCCCGCATGGAAGCGGCCGT
CAAGCGGGGGGATTACGCCCAGGCATTGAGCGAATACGACTCGCTGCCGCCCAGCGCCAAGGACGTGGCCGCGGAATTCG
CGGAGAAGCTGCGTGCGCGGCGAGCGGCCGATCAGGTCCTCGAAAAGGCGCTTTCGAACGCGCTAAAGCCCGCGTAA

Upstream 100 bases:

>100_bases
CTGCTGCCCAAGGTGTGACGGGCGTCAATGGTTTTTCAGGCTTGGGGCCTATAGTAGGAATATCGGCACACAGCGCGATT
TTGAGAAACGGAGCTGCCAC

Downstream 100 bases:

>100_bases
GGACGGCGCCATGTTCCGCATCCTCCTCTTCCTCGTCATTGTCATGCTTCTCGGGCTGGGTTTTGCCTGGCTTGCCGACA
GGCCAGGCGAGCTTGCCGTG

Product: putative phage tail protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEA
GSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQ
QQADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL
ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAA
SALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASAR
SAVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA

Sequences:

>Translated_478_residues
MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEA
GSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQ
QQADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL
ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAA
SALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASAR
SAVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA
>Mature_477_residues
AKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEAG
SDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQ
QADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAELE
NRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAAS
ALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARS
AVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA

Specific function: Unknown

COG id: COG4223

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50088; Mature: 49956

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSN
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCC
MTGIGADESAREEAQPAMEAGSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRA
CCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHC
PVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQQADPAMSNLEQQVAALQNE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHH
ISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEQVAKEDEGPRLALIVAASALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTG
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCC
IPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARSAVTVRPVGEVPGDTPEAIA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH
ARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA
HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSN
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCC
MTGIGADESAREEAQPAMEAGSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRA
CCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHC
PVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQQADPAMSNLEQQVAALQNE
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHH
ISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEQVAKEDEGPRLALIVAASALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTG
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCC
IPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARSAVTVRPVGEVPGDTPEAIA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH
ARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA
HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA