| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635529
Identifier: 110635529
GI number: 110635529
Start: 3469608
End: 3471044
Strand: Reverse
Name: 110635529
Synonym: Meso_3200
Alternate gene names: NA
Gene position: 3471044-3469608 (Counterclockwise)
Preceding gene: 110635530
Following gene: 110635528
Centisome position: 78.66
GC content: 65.55
Gene sequence:
>1437_bases ATGGCCAAGACACCGAGGACGCGCCACTCCAAGTCGAGCCGCGAGCCCGTGACGATCGACCTGGAGGCCGAGCCTGTCCA TCGTGAGCCGACTCCTATGGAAGAGGTGTCGTCGGGCGGAGAATCGGCCAGCTCCGAGGAGTTTTCCGGCCAGGATCCGG TTGATCAGGCATCTTCGAACATGACGGGTATAGGTGCGGATGAGTCTGCCCGTGAGGAAGCCCAGCCTGCGATGGAAGCC GGTTCAGACTCCGTGTCACAGTCGCAGCCCCAGGAAGATGAGCCCCTTCAGCCGGATGAAGCACGTGCCGATATGGAGGC ACCGGCTGAGGAGCCGGCCTCCGAAGAGCAGACCCGAGCGCCGGTTCGGAGCCGCGGCGGCTTCGCAAACGCGTTTGTCG GTGGCCTTCTGGGCGCGCTGATCATGCTCCTGATCGGGGGAGCATTGCTCTGGACGGGAGTTCTTCCCGGAACGCGGCAG CAGCAAGCCGATCCCGCCATGAGCAATCTGGAGCAGCAGGTTGCCGCTCTGCAAAATGAGATTTCCCAATTGCGCGAGAA TGCCGCAGCGGGACCTTCCGCTGAAGCGTTGCAACAGGCACTTGCCGAGCCGCGGCAGCAGATCAGCGAATTGCGCGACA CGGTCGCAGCCCTGCAATCCGCTCCGCCGGCTGAAAATGGCGCGGAACTGCAGCGGCTGGGGCAGCAGCTTGCTGAGCTT GAGAACCGGGTGGCTTCGGTCGCGCAGACGGCCGGCACCGGCGATACTTCCCAGCTTTCGCAGCAGGTGAGCGAACTTGA AATGCGCGTCGCCGGGGCCATGGAAGCCGCCAACACCGCACAGGAAAGGGGTGCGGCGACGGCGCAGCAGGTGAATGAGC TGGCGCGCCAAGTCACGCAGCTCAGCGAGCAAGTGGCCAAGGAGGATGAAGGGCCGAGACTCGCGCTCATCGTGGCCGCG TCCGCCCTGCGTTCCGCGGTGGAGCGTGGTGCGCCTTTTGGAAGCGAGCTGGATACCTATTCCGCCATCGCGCCCAATGC GCCCGAACTCGACCCGCTCAGGCCCTATGCACAGACGGGCATTCCCACCGAAGCCGCCCTTGTCAGCGAGGCGCCGCAGA TCGCATCGCGGATTGCCGCATCCTCATCCGATCTGCCACCCGATGCCGGCGTTTTCGATCGCCTGATGGCGAGCGCGCGC TCTGCTGTAACGGTCCGGCCGGTCGGCGAGGTGCCGGGGGATACGCCGGAGGCGATCGCCGCCCGCATGGAAGCGGCCGT CAAGCGGGGGGATTACGCCCAGGCATTGAGCGAATACGACTCGCTGCCGCCCAGCGCCAAGGACGTGGCCGCGGAATTCG CGGAGAAGCTGCGTGCGCGGCGAGCGGCCGATCAGGTCCTCGAAAAGGCGCTTTCGAACGCGCTAAAGCCCGCGTAA
Upstream 100 bases:
>100_bases CTGCTGCCCAAGGTGTGACGGGCGTCAATGGTTTTTCAGGCTTGGGGCCTATAGTAGGAATATCGGCACACAGCGCGATT TTGAGAAACGGAGCTGCCAC
Downstream 100 bases:
>100_bases GGACGGCGCCATGTTCCGCATCCTCCTCTTCCTCGTCATTGTCATGCTTCTCGGGCTGGGTTTTGCCTGGCTTGCCGACA GGCCAGGCGAGCTTGCCGTG
Product: putative phage tail protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEA GSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQ QQADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAA SALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASAR SAVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA
Sequences:
>Translated_478_residues MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEA GSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQ QQADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAA SALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASAR SAVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA >Mature_477_residues AKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSNMTGIGADESAREEAQPAMEAG SDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRAPVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQ QADPAMSNLEQQVAALQNEISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAELE NRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQLSEQVAKEDEGPRLALIVAAS ALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTGIPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARS AVTVRPVGEVPGDTPEAIAARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA
Specific function: Unknown
COG id: COG4223
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50088; Mature: 49956
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSN CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCC MTGIGADESAREEAQPAMEAGSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRA CCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHC PVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQQADPAMSNLEQQVAALQNE CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHH ISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEQVAKEDEGPRLALIVAASALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTG HHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCC IPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARSAVTVRPVGEVPGDTPEAIA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH ARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKTPRTRHSKSSREPVTIDLEAEPVHREPTPMEEVSSGGESASSEEFSGQDPVDQASSN CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHCC MTGIGADESAREEAQPAMEAGSDSVSQSQPQEDEPLQPDEARADMEAPAEEPASEEQTRA CCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHC PVRSRGGFANAFVGGLLGALIMLLIGGALLWTGVLPGTRQQQADPAMSNLEQQVAALQNE CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHH ISQLRENAAAGPSAEALQQALAEPRQQISELRDTVAALQSAPPAENGAELQRLGQQLAEL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ENRVASVAQTAGTGDTSQLSQQVSELEMRVAGAMEAANTAQERGAATAQQVNELARQVTQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEQVAKEDEGPRLALIVAASALRSAVERGAPFGSELDTYSAIAPNAPELDPLRPYAQTG HHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCC IPTEAALVSEAPQIASRIAASSSDLPPDAGVFDRLMASARSAVTVRPVGEVPGDTPEAIA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH ARMEAAVKRGDYAQALSEYDSLPPSAKDVAAEFAEKLRARRAADQVLEKALSNALKPA HHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA