Click here to switch to the map view.

The map label for this gene is 110635527

Identifier: 110635527

GI number: 110635527

Start: 3467390

End: 3467860

Strand: Reverse

Name: 110635527

Synonym: Meso_3198

Alternate gene names: NA

Gene position: 3467860-3467390 (Counterclockwise)

Preceding gene: 110635528

Following gene: 110635526

Centisome position: 78.59

GC content: 62.0

Gene sequence:

>471_bases
ATGTTTGATCGCATCCTCGCCTTCCTCAAGGACCTGCCTTCCGGCGCCAAGGCGTCACGCGTGCAGGAGGATGATCCGCG
CGTGGCGGCGGCGGCGCTCCTTATCCACGTGATGGCGGCCGACGGAATGTGCGGCGAGGACGAGCGTGCCCGGCTCAAGA
GTACCCTTTCGAGCACCTTCAATGTCAGCGGGGCGGAACTCAAGGCGCTTTTGAGGGCCGCGGAGGAAGCGGAGGCCGAT
GCCGTCGACCTCTACGCCTTCACGAGTGTGCTCAAGCGGCACTATGACGAGAACGCTCGCGCCGAATTCATCCGCCTCAT
GTGGGAAATGGTGCTTTCGGATGGCGAAATGCATGAATTGGAGGACAATCTCGTCTGGCGCGTGGCCGAGCTGATCGGCA
TCGATACGCGCACGCGCGTAAACATGCGGCAGAGCGTGCAGGCCGAAATCCGGGATAAAGAGGGCGAATAG

Upstream 100 bases:

>100_bases
GCTTTCATTTTTTCTTGAAGGATCTTCGCAATTGCAAAAAAAGGCATTGTAGGCCTTCGCGCGAGTTTTAACATACACAA
GTGATTCCGAAGGATCTGTT

Downstream 100 bases:

>100_bases
CTGCAGGATATGGCACGAGGGGCGGGTAAGAAGATCCTGGTTGTCTTGCACCAGGAGATGTCCAGTCCGGGCCGCGTCGG
CCAGCTCCTTGAGATGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MFDRILAFLKDLPSGAKASRVQEDDPRVAAAALLIHVMAADGMCGEDERARLKSTLSSTFNVSGAELKALLRAAEEAEAD
AVDLYAFTSVLKRHYDENARAEFIRLMWEMVLSDGEMHELEDNLVWRVAELIGIDTRTRVNMRQSVQAEIRDKEGE

Sequences:

>Translated_156_residues
MFDRILAFLKDLPSGAKASRVQEDDPRVAAAALLIHVMAADGMCGEDERARLKSTLSSTFNVSGAELKALLRAAEEAEAD
AVDLYAFTSVLKRHYDENARAEFIRLMWEMVLSDGEMHELEDNLVWRVAELIGIDTRTRVNMRQSVQAEIRDKEGE
>Mature_156_residues
MFDRILAFLKDLPSGAKASRVQEDDPRVAAAALLIHVMAADGMCGEDERARLKSTLSSTFNVSGAELKALLRAAEEAEAD
AVDLYAFTSVLKRHYDENARAEFIRLMWEMVLSDGEMHELEDNLVWRVAELIGIDTRTRVNMRQSVQAEIRDKEGE

Specific function: Unknown

COG id: COG4103

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17513; Mature: 17513

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRILAFLKDLPSGAKASRVQEDDPRVAAAALLIHVMAADGMCGEDERARLKSTLSSTF
CHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
NVSGAELKALLRAAEEAEADAVDLYAFTSVLKRHYDENARAEFIRLMWEMVLSDGEMHEL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
EDNLVWRVAELIGIDTRTRVNMRQSVQAEIRDKEGE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFDRILAFLKDLPSGAKASRVQEDDPRVAAAALLIHVMAADGMCGEDERARLKSTLSSTF
CHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
NVSGAELKALLRAAEEAEADAVDLYAFTSVLKRHYDENARAEFIRLMWEMVLSDGEMHEL
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
EDNLVWRVAELIGIDTRTRVNMRQSVQAEIRDKEGE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA