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The map label for this gene is yebC [C]

Identifier: 110635521

GI number: 110635521

Start: 3462258

End: 3463007

Strand: Reverse

Name: yebC [C]

Synonym: Meso_3192

Alternate gene names: 110635521

Gene position: 3463007-3462258 (Counterclockwise)

Preceding gene: 110635523

Following gene: 110635520

Centisome position: 78.48

GC content: 62.4

Gene sequence:

>750_bases
ATGGCCGGCCATTCCCAATTCAAGAACATCATGCATCGCAAGGGCCGCCAGGACGCGGTCAAGTCGAAGATGTTCTCCAA
GCTGGCGCGCGAGATCACCGTTGCAGCCAAAGCGGGCCTGCCCGACCCGGCGATGAATCCGCGCCTCAGGCTTGCGGTGC
AGAATGCCCGCGCCCAGTCCATGCCCAAGGACAATATCGAGCGCGCCATCAAGAAAGCGCAGGGCAATGACGCGGAGACC
TATGAGGAAATCCGTTACGAGGGCTATGCCCCTGGCGGTGTCGCCGTCATTGTCGAGGCCCTGACGGACAACCGCAATCG
CACCGCCTCCAATGTGCGCGCAGCCTTCACGAAAGCGGGCGGTGCGTTGGGCGAGACGGGCTCGGTGTCCTTCATGTTCG
ATCGCGTGGGCGAGATCGTCTACCCTGCTTCGGCAGGCGACGCGGACAAGGTGATGGAAGCGGCCATCGAAGCTGGCGCG
GAAGACGTCCAGTCGGATGAGAACGGCCACGTCATCATCTGTGCCTTCGAAGATATCGGCGAGGTAACGTCGGCGTTGGA
AGAAGCGCTTGGCGAGGCGGAATCGGTCAAGACCGTATGGCGGCCGCAGACCTCCACTCCCGTTGACGAGGAGCGCGCCC
AGTCGATCCTGAAGCTCATCGCCGTGCTGGAGGACGACGACGACGTGCAGAACGTCTATGCCAATTTCGAGGTGGACGAT
GCCACTATGGCGAAGCTGAGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GAGGCATAACCGTCGCAAATAGCGGTTCTGGACGTTGCGGGCCCTTTTCAATATAAGCCTGCAAATCCAACAGATTTTCA
GAATTCCGAGAAGGAGCCCC

Downstream 100 bases:

>100_bases
GGAACGACCTGATGTCCCACCGGGTGACGATTGCCTATTGCACGCAATGCCACTGGCTGCTTCGGGCGGGGTGGATGGCG
CAGGAGCTTCTTTCCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSQFKNIMHRKGRQDAVKSKMFSKLAREITVAAKAGLPDPAMNPRLRLAVQNARAQSMPKDNIERAIKKAQGNDAET
YEEIRYEGYAPGGVAVIVEALTDNRNRTASNVRAAFTKAGGALGETGSVSFMFDRVGEIVYPASAGDADKVMEAAIEAGA
EDVQSDENGHVIICAFEDIGEVTSALEEALGEAESVKTVWRPQTSTPVDEERAQSILKLIAVLEDDDDVQNVYANFEVDD
ATMAKLSAA

Sequences:

>Translated_249_residues
MAGHSQFKNIMHRKGRQDAVKSKMFSKLAREITVAAKAGLPDPAMNPRLRLAVQNARAQSMPKDNIERAIKKAQGNDAET
YEEIRYEGYAPGGVAVIVEALTDNRNRTASNVRAAFTKAGGALGETGSVSFMFDRVGEIVYPASAGDADKVMEAAIEAGA
EDVQSDENGHVIICAFEDIGEVTSALEEALGEAESVKTVWRPQTSTPVDEERAQSILKLIAVLEDDDDVQNVYANFEVDD
ATMAKLSAA
>Mature_248_residues
AGHSQFKNIMHRKGRQDAVKSKMFSKLAREITVAAKAGLPDPAMNPRLRLAVQNARAQSMPKDNIERAIKKAQGNDAETY
EEIRYEGYAPGGVAVIVEALTDNRNRTASNVRAAFTKAGGALGETGSVSFMFDRVGEIVYPASAGDADKVMEAAIEAGAE
DVQSDENGHVIICAFEDIGEVTSALEEALGEAESVKTVWRPQTSTPVDEERAQSILKLIAVLEDDDDVQNVYANFEVDDA
TMAKLSAA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=246, Percent_Identity=32.1138211382114, Blast_Score=117, Evalue=7e-27,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.1774193548387, Blast_Score=219, Evalue=1e-58,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=38.6266094420601, Blast_Score=156, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=247, Percent_Identity=24.6963562753036, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=33.0798479087452, Blast_Score=123, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=26.6129032258064, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3192_MESSB (Q11DG1)

Other databases:

- EMBL:   CP000390
- RefSeq:   YP_675729.1
- ProteinModelPortal:   Q11DG1
- SMR:   Q11DG1
- STRING:   Q11DG1
- GeneID:   4182282
- GenomeReviews:   CP000390_GR
- KEGG:   mes:Meso_3192
- NMPDR:   fig|266779.1.peg.93
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q11DG1
- ProtClustDB:   PRK00110
- BioCyc:   MSP266779:MESO_3192-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26806; Mature: 26675

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGRQDAVKSKMFSKLAREITVAAKAGLPDPAMNPRLRLAVQNARAQS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHC
MPKDNIERAIKKAQGNDAETYEEIRYEGYAPGGVAVIVEALTDNRNRTASNVRAAFTKAG
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GALGETGSVSFMFDRVGEIVYPASAGDADKVMEAAIEAGAEDVQSDENGHVIICAFEDIG
CCCCCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHCCCCCCCEEEEEHHHHH
EVTSALEEALGEAESVKTVWRPQTSTPVDEERAQSILKLIAVLEDDDDVQNVYANFEVDD
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH
ATMAKLSAA
HHHHHHCCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGRQDAVKSKMFSKLAREITVAAKAGLPDPAMNPRLRLAVQNARAQS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHC
MPKDNIERAIKKAQGNDAETYEEIRYEGYAPGGVAVIVEALTDNRNRTASNVRAAFTKAG
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCC
GALGETGSVSFMFDRVGEIVYPASAGDADKVMEAAIEAGAEDVQSDENGHVIICAFEDIG
CCCCCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHCHHHHCCCCCCCEEEEEHHHHH
EVTSALEEALGEAESVKTVWRPQTSTPVDEERAQSILKLIAVLEDDDDVQNVYANFEVDD
HHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH
ATMAKLSAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA