Click here to switch to the map view.

The map label for this gene is galE [H]

Identifier: 110635515

GI number: 110635515

Start: 3456272

End: 3457189

Strand: Reverse

Name: galE [H]

Synonym: Meso_3186

Alternate gene names: 110635515

Gene position: 3457189-3456272 (Counterclockwise)

Preceding gene: 110635518

Following gene: 110635510

Centisome position: 78.35

GC content: 64.16

Gene sequence:

>918_bases
ATGGCGCGAATACTCGTGACCGGCGCCACGGGATTTATCGGCCGTCATCTCGTGCCGGTGCTTCTGAAGCGCGGCCATGA
AGTGGTCGAGGTAGGCCGGCGCACGTACGAATCCGCAGGGCGCTTCGTCGCCGTGGGCGATATCGGCCCGACGACAGATT
GGTCGCCGGCGCTGGGAGGCGTTGACGCCGTCATTCATCTGGCAGGGCTCGCCCATAGGGAAGACGCGGATGAGGCCATG
TTCTTCTCCGTCAACGACGCGGGGACGCGAAGGCTTGCCGAAGCCGCTCAAGCAGCCGGCGCAAAGGTGCTGGTGGCCTT
GAGCAGCATCGCCGCCCGGGAAGCTGAGCAGAACCCGCAAAAGGCCAATGCCTATGGCCGCTCCAAGCTCGCCTCGGAAG
CGCATGCGCGGTCTTTCGCCGAGGGAGGCGGCGTTAGCATCGTGCTGCGTCCGCCGCTGGTCTATGGCCATGATGCGCCG
GGGAATTGGCGAAAGCTGCAGCGCCTCGCGGCAAGCGGTTTTCCGCTGCCTTTCGGCGCCGTGCGGAACCGGCGCTCGAT
CTGTTCGGTCGGCAATCTGTGCAGCGCCATAGCCGCTGCGGTCGAAGCCGGGCTGAACGGTACCGGCAATGGCGTCTATG
AGATTGCGGATCGCGAAGTGGTCTCGCTTGCCGACATTCTTGCCTGGCTGAGGGAGGGCATGGGCCGCCCGATAAGGCTT
CTTCCTGTGCCTGCAGGCATGTTGGGCGCGGTGGCCGATCTTGCAGGCAAGCAGAAGCTCAAGACCGCGCTTTTAGAGGA
TCTGACGCTCGATCCGTCATCCTTCATGCGCGTCTTTGCCTGGAGTCCGCCGGACCATGCGGAGGAGGCGATCAGGCTTT
CAGGCAGGCTTTACGCTTTTGGAGGCAACGCAGCCTGA

Upstream 100 bases:

>100_bases
AAATGTGACGAAATTGAAATATATATCCATTCGACCACTGCCTATCATCCGCAGAGGTGGTTCAGGCGATATCTAGCGAA
ACCTAAGCCGGAGGGAGTTG

Downstream 100 bases:

>100_bases
TAAACAGGGATGCAATGCAAGAAGCGCTGCAGCCTCAGGAAACCGGTTTCTGCAGCGCCTTCAGCAGGCTGCGGTGGATG
AGCTCGTTGCCCGCCACCAC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MARILVTGATGFIGRHLVPVLLKRGHEVVEVGRRTYESAGRFVAVGDIGPTTDWSPALGGVDAVIHLAGLAHREDADEAM
FFSVNDAGTRRLAEAAQAAGAKVLVALSSIAAREAEQNPQKANAYGRSKLASEAHARSFAEGGGVSIVLRPPLVYGHDAP
GNWRKLQRLAASGFPLPFGAVRNRRSICSVGNLCSAIAAAVEAGLNGTGNGVYEIADREVVSLADILAWLREGMGRPIRL
LPVPAGMLGAVADLAGKQKLKTALLEDLTLDPSSFMRVFAWSPPDHAEEAIRLSGRLYAFGGNAA

Sequences:

>Translated_305_residues
MARILVTGATGFIGRHLVPVLLKRGHEVVEVGRRTYESAGRFVAVGDIGPTTDWSPALGGVDAVIHLAGLAHREDADEAM
FFSVNDAGTRRLAEAAQAAGAKVLVALSSIAAREAEQNPQKANAYGRSKLASEAHARSFAEGGGVSIVLRPPLVYGHDAP
GNWRKLQRLAASGFPLPFGAVRNRRSICSVGNLCSAIAAAVEAGLNGTGNGVYEIADREVVSLADILAWLREGMGRPIRL
LPVPAGMLGAVADLAGKQKLKTALLEDLTLDPSSFMRVFAWSPPDHAEEAIRLSGRLYAFGGNAA
>Mature_304_residues
ARILVTGATGFIGRHLVPVLLKRGHEVVEVGRRTYESAGRFVAVGDIGPTTDWSPALGGVDAVIHLAGLAHREDADEAMF
FSVNDAGTRRLAEAAQAAGAKVLVALSSIAAREAEQNPQKANAYGRSKLASEAHARSFAEGGGVSIVLRPPLVYGHDAPG
NWRKLQRLAASGFPLPFGAVRNRRSICSVGNLCSAIAAAVEAGLNGTGNGVYEIADREVVSLADILAWLREGMGRPIRLL
PVPAGMLGAVADLAGKQKLKTALLEDLTLDPSSFMRVFAWSPPDHAEEAIRLSGRLYAFGGNAA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 32047; Mature: 31916

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARILVTGATGFIGRHLVPVLLKRGHEVVEVGRRTYESAGRFVAVGDIGPTTDWSPALGG
CCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCH
VDAVIHLAGLAHREDADEAMFFSVNDAGTRRLAEAAQAAGAKVLVALSSIAAREAEQNPQ
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
KANAYGRSKLASEAHARSFAEGGGVSIVLRPPLVYGHDAPGNWRKLQRLAASGFPLPFGA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCCHHH
VRNRRSICSVGNLCSAIAAAVEAGLNGTGNGVYEIADREVVSLADILAWLREGMGRPIRL
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEE
LPVPAGMLGAVADLAGKQKLKTALLEDLTLDPSSFMRVFAWSPPDHAEEAIRLSGRLYAF
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHCCEEEEE
GGNAA
CCCCC
>Mature Secondary Structure 
ARILVTGATGFIGRHLVPVLLKRGHEVVEVGRRTYESAGRFVAVGDIGPTTDWSPALGG
CEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCH
VDAVIHLAGLAHREDADEAMFFSVNDAGTRRLAEAAQAAGAKVLVALSSIAAREAEQNPQ
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCH
KANAYGRSKLASEAHARSFAEGGGVSIVLRPPLVYGHDAPGNWRKLQRLAASGFPLPFGA
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCHHHHHHHHHHCCCCCCHHH
VRNRRSICSVGNLCSAIAAAVEAGLNGTGNGVYEIADREVVSLADILAWLREGMGRPIRL
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEE
LPVPAGMLGAVADLAGKQKLKTALLEDLTLDPSSFMRVFAWSPPDHAEEAIRLSGRLYAF
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCHHHHHHHHHCCEEEEE
GGNAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]