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The map label for this gene is ydbC [H]

Identifier: 110635270

GI number: 110635270

Start: 3199022

End: 3199876

Strand: Reverse

Name: ydbC [H]

Synonym: Meso_2941

Alternate gene names: 110635270

Gene position: 3199876-3199022 (Counterclockwise)

Preceding gene: 110635271

Following gene: 110635261

Centisome position: 72.52

GC content: 65.38

Gene sequence:

>855_bases
ATGAGCACAATCGACGCCAGCCACTCCGGCCAGTTCCGGATCGGAGACATCGAGATCAACCGCCTGGGCTACGGTGCCAT
GCGGATCACCGGCCCTGGCATCTGGGGGCCTCCCCTTGACCGCGACGCGGCACTCGCCACGCTGCGCCGCTTGCCCGAGA
TCGGCGTCAACTTCATTGACACCGCCGACAGCTACGGCCCGGACGTTTCCGAAGAACTGATCCGCGAGGGGCTGCATCCC
TATAACGGGCTGCTGGTCGCCACCAAGGCGGGCTTTACGCGGAGCGGCCCGGATGTGTGGACCCCGAACGGCCGACCGGA
CTATCTGATCGAACGCGCCAAGGGTAGTCTCAAGAAGCTTGGGGTGGAGCGGATAGATTTGTGGCAACTCCACCGCATCG
ACCGAAAAGTGCCGCGCGACGAGCAGTTCGGCGCGGTCAGGCAGCTTCTGGACGAAGGCATCATCCGCCATGCAGGGCTG
AGCGAGGTCTCGGTTGAGGAGATCGAAGCCGCCCGCAAGATGTTCCCGGTGGCGACGGTGCAGAACCGCTATAACCTCGT
GGATCGCGGCAGCGAGGAGGTGCTGGCCTATTGCGCGGCGAACGGCATCGGCTTCATCCCGTGGTATCCGTTGGCGGCTG
GCAATTTGACCCGGCCCGGCGGGGTGGTGGATCGCATCGCCAGGGCGCATGAGGCCACCTCCGGTCAGGTGGCGCTTGCC
TGGCTCTTGCAGCGCAGCCCGGTCATGCTACCCATACCCGGCACGCTGCGGGTCGCCCATCTGGAAGAGAACGTAGGGGC
GGCCTCTCTGAGGCTGACGAGTGCCGAAGTAGCCGAGCTCGACGCCACAGCCTAG

Upstream 100 bases:

>100_bases
TTTCGACGGATTTCGCCGAGGATTCCCGGGCCTGACCTCTGGTCCCGAGAAGCCAGATCCCACTGTCCTCCTCCAGCAAC
ACAGACAAAGGAAAACAACC

Downstream 100 bases:

>100_bases
TCGTTCCGCCCGCATCCCCACGGAGGGCGCTGAATTTCCGCGTCCTCCTTCCCGCTCCGGGGCCAAGCGGCGGAGACAAG
AGAGATGACGCGCGGAATGC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSTIDASHSGQFRIGDIEINRLGYGAMRITGPGIWGPPLDRDAALATLRRLPEIGVNFIDTADSYGPDVSEELIREGLHP
YNGLLVATKAGFTRSGPDVWTPNGRPDYLIERAKGSLKKLGVERIDLWQLHRIDRKVPRDEQFGAVRQLLDEGIIRHAGL
SEVSVEEIEAARKMFPVATVQNRYNLVDRGSEEVLAYCAANGIGFIPWYPLAAGNLTRPGGVVDRIARAHEATSGQVALA
WLLQRSPVMLPIPGTLRVAHLEENVGAASLRLTSAEVAELDATA

Sequences:

>Translated_284_residues
MSTIDASHSGQFRIGDIEINRLGYGAMRITGPGIWGPPLDRDAALATLRRLPEIGVNFIDTADSYGPDVSEELIREGLHP
YNGLLVATKAGFTRSGPDVWTPNGRPDYLIERAKGSLKKLGVERIDLWQLHRIDRKVPRDEQFGAVRQLLDEGIIRHAGL
SEVSVEEIEAARKMFPVATVQNRYNLVDRGSEEVLAYCAANGIGFIPWYPLAAGNLTRPGGVVDRIARAHEATSGQVALA
WLLQRSPVMLPIPGTLRVAHLEENVGAASLRLTSAEVAELDATA
>Mature_283_residues
STIDASHSGQFRIGDIEINRLGYGAMRITGPGIWGPPLDRDAALATLRRLPEIGVNFIDTADSYGPDVSEELIREGLHPY
NGLLVATKAGFTRSGPDVWTPNGRPDYLIERAKGSLKKLGVERIDLWQLHRIDRKVPRDEQFGAVRQLLDEGIIRHAGLS
EVSVEEIEAARKMFPVATVQNRYNLVDRGSEEVLAYCAANGIGFIPWYPLAAGNLTRPGGVVDRIARAHEATSGQVALAW
LLQRSPVMLPIPGTLRVAHLEENVGAASLRLTSAEVAELDATA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=280, Percent_Identity=39.6428571428571, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI87081735, Length=308, Percent_Identity=31.1688311688312, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788070, Length=304, Percent_Identity=27.6315789473684, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789375, Length=322, Percent_Identity=27.0186335403727, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788081, Length=263, Percent_Identity=30.4182509505703, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1786400, Length=268, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325169, Length=331, Percent_Identity=24.773413897281, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 30960; Mature: 30828

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIDASHSGQFRIGDIEINRLGYGAMRITGPGIWGPPLDRDAALATLRRLPEIGVNFID
CCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
TADSYGPDVSEELIREGLHPYNGLLVATKAGFTRSGPDVWTPNGRPDYLIERAKGSLKKL
CCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GVERIDLWQLHRIDRKVPRDEQFGAVRQLLDEGIIRHAGLSEVSVEEIEAARKMFPVATV
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
QNRYNLVDRGSEEVLAYCAANGIGFIPWYPLAAGNLTRPGGVVDRIARAHEATSGQVALA
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
WLLQRSPVMLPIPGTLRVAHLEENVGAASLRLTSAEVAELDATA
HHHHCCCEEEECCCCEEEEEECCCCCCEEEEECHHHHHHCCCCC
>Mature Secondary Structure 
STIDASHSGQFRIGDIEINRLGYGAMRITGPGIWGPPLDRDAALATLRRLPEIGVNFID
CCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
TADSYGPDVSEELIREGLHPYNGLLVATKAGFTRSGPDVWTPNGRPDYLIERAKGSLKKL
CCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GVERIDLWQLHRIDRKVPRDEQFGAVRQLLDEGIIRHAGLSEVSVEEIEAARKMFPVATV
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
QNRYNLVDRGSEEVLAYCAANGIGFIPWYPLAAGNLTRPGGVVDRIARAHEATSGQVALA
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
WLLQRSPVMLPIPGTLRVAHLEENVGAASLRLTSAEVAELDATA
HHHHCCCEEEECCCCEEEEEECCCCCCEEEEECHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]