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The map label for this gene is bsdC [H]

Identifier: 110635255

GI number: 110635255

Start: 3181233

End: 3182684

Strand: Reverse

Name: bsdC [H]

Synonym: Meso_2926

Alternate gene names: 110635255

Gene position: 3182684-3181233 (Counterclockwise)

Preceding gene: 110635256

Following gene: 110635254

Centisome position: 72.13

GC content: 58.06

Gene sequence:

>1452_bases
ATGACTTACCTGAAGAACCGGCCGGAGCCCTACAAGGATTTGCGTGAATTCCTGGCGCAGGTTGAGGCGATCGGTGAGCT
GAAAACCGTCAAAGGCGCGAGCTGGGACCTGGAAATGGGATGCCTGGCCGAACTGATCTATCATAATGATCAGGAAAGCC
CGCCGGCGATCTGCTTCGAAGATATTCCCGGATATCCGGGCTTTCGTTGCGTATCCGGGCTGACCAATTCCAGCCAGCGG
CTTGCCATTACGCTCGGCTTCCCGCTTTCCAAGAATCCGCTCGACATCGTCCAGAGCTACCGCGACCGCATGAAAGTGCA
CGAGCCGCTACCTCCGCGATTTGTTTCATCCGAGGAAGCGCCGATCTACGAGAATGTGCTGCGCGACGACGAGATCGATA
TCCTGAAGTTCCCGATTCCCAAGCTGCACGAACTCGATGGCGGGCGCTACGCTGGTACAGACGATCTTGTCATCATGCAG
GATCCCGAGGATGGTTGGGTCAATATCGGCACCTATCGCTCGATGGTGCATGATGCCAGGTCGCTCGGCCTATGGATTTC
GCCGGGAAAGCAGGGCCGCCAGATCCGCGACAAATACTTTGCCCAGAACAAGCCTTGCCCAGTGTTGATCTGCATCGGGC
ACGACCCGTTGCTGTTCCTGGCGTCGGGCAACGAGTTGGCCTATGGCCTTTCCGAGTTTGACTATGCGGGTGGGCATCGT
GGCGTGCCATTCGAGGTCGTCAAAAGCGACGTCCATGGCCTGCCGATGCCGGCTCATGCCGAAATCGTCATTGAGGGTGA
AATGCACCCCGGCGAGCTCAGAATGGAGGGCCCGTTTGGCGAGTTTACCGGCTATTACGCCAGCAATCCAAGCCCGCAGC
CGGTAGTGCGTATCCAACACATTTACCACCGCAACAATCCGATCATGACTATGGCGTCGCCAATGCAGCCGCCATCCGAT
TTCAGCTTTTCAAAATGCGTCACGAAATCCGGTATGATCTGGGACGAGGTGGAGCGCGCCGGTCTATCGGGCGTGCGCGG
GGTCTGGTGCCACGAGGCCGGTGGCGCGCGCATGTTCAACATCATTTCTATCAAGCAGCGCTATCCCGGACATGCCCGGC
AGGCGCTGCACCTGGCCGCCAGCTGCCAATCGGCGTCATATCTCGGGCGCTGGGTGGTCGTTGTCGATGAGGATATCGAT
CCGACCAATACTTTTGACGTGCTTTGGGCGATATCGACCCGCTGCGATCCTGCCCAAGACGTGGATTTTATCCGTCGCGC
CTGGTCTGGCCCGCTTGATCCAATGCTCAACGAGGCGGATGGCACCAATTCGCGCGGACTCATCGATGCCTGTCGGCCAT
TTGAGCGGTTGAAGACGTTTCCGCCAGTGGCGCGGGCATCCGACAAGTTCCGCAATGAAATCGCGGAGAAGTTCAAGCAC
TATCTCGAATAG

Upstream 100 bases:

>100_bases
AGCTCGTCCGACTGTCCAACAACTACAAGAAAATCGCGGGTTATGATCGAGAGCATCTCGGCGCGCGAGCGTCCGGGCCT
CAAATCACGGGAAACACGAT

Downstream 100 bases:

>100_bases
TTCCGTCCAGGGGAGGATGAAAAAACGCCGGGGAGGGCAAAATTTGGCCCAACGGCCGGAAGCGAGATGCGCGGTGCAAC
CCGCGTACCGGTCAAAAGTG

Product: UbiD family decarboxylase

Products: NA

Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit C; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit C; Vanillate decarboxylase subunit C [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTYLKNRPEPYKDLREFLAQVEAIGELKTVKGASWDLEMGCLAELIYHNDQESPPAICFEDIPGYPGFRCVSGLTNSSQR
LAITLGFPLSKNPLDIVQSYRDRMKVHEPLPPRFVSSEEAPIYENVLRDDEIDILKFPIPKLHELDGGRYAGTDDLVIMQ
DPEDGWVNIGTYRSMVHDARSLGLWISPGKQGRQIRDKYFAQNKPCPVLICIGHDPLLFLASGNELAYGLSEFDYAGGHR
GVPFEVVKSDVHGLPMPAHAEIVIEGEMHPGELRMEGPFGEFTGYYASNPSPQPVVRIQHIYHRNNPIMTMASPMQPPSD
FSFSKCVTKSGMIWDEVERAGLSGVRGVWCHEAGGARMFNIISIKQRYPGHARQALHLAASCQSASYLGRWVVVVDEDID
PTNTFDVLWAISTRCDPAQDVDFIRRAWSGPLDPMLNEADGTNSRGLIDACRPFERLKTFPPVARASDKFRNEIAEKFKH
YLE

Sequences:

>Translated_483_residues
MTYLKNRPEPYKDLREFLAQVEAIGELKTVKGASWDLEMGCLAELIYHNDQESPPAICFEDIPGYPGFRCVSGLTNSSQR
LAITLGFPLSKNPLDIVQSYRDRMKVHEPLPPRFVSSEEAPIYENVLRDDEIDILKFPIPKLHELDGGRYAGTDDLVIMQ
DPEDGWVNIGTYRSMVHDARSLGLWISPGKQGRQIRDKYFAQNKPCPVLICIGHDPLLFLASGNELAYGLSEFDYAGGHR
GVPFEVVKSDVHGLPMPAHAEIVIEGEMHPGELRMEGPFGEFTGYYASNPSPQPVVRIQHIYHRNNPIMTMASPMQPPSD
FSFSKCVTKSGMIWDEVERAGLSGVRGVWCHEAGGARMFNIISIKQRYPGHARQALHLAASCQSASYLGRWVVVVDEDID
PTNTFDVLWAISTRCDPAQDVDFIRRAWSGPLDPMLNEADGTNSRGLIDACRPFERLKTFPPVARASDKFRNEIAEKFKH
YLE
>Mature_482_residues
TYLKNRPEPYKDLREFLAQVEAIGELKTVKGASWDLEMGCLAELIYHNDQESPPAICFEDIPGYPGFRCVSGLTNSSQRL
AITLGFPLSKNPLDIVQSYRDRMKVHEPLPPRFVSSEEAPIYENVLRDDEIDILKFPIPKLHELDGGRYAGTDDLVIMQD
PEDGWVNIGTYRSMVHDARSLGLWISPGKQGRQIRDKYFAQNKPCPVLICIGHDPLLFLASGNELAYGLSEFDYAGGHRG
VPFEVVKSDVHGLPMPAHAEIVIEGEMHPGELRMEGPFGEFTGYYASNPSPQPVVRIQHIYHRNNPIMTMASPMQPPSDF
SFSKCVTKSGMIWDEVERAGLSGVRGVWCHEAGGARMFNIISIKQRYPGHARQALHLAASCQSASYLGRWVVVVDEDIDP
TNTFDVLWAISTRCDPAQDVDFIRRAWSGPLDPMLNEADGTNSRGLIDACRPFERLKTFPPVARASDKFRNEIAEKFKHY
LE

Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=469, Percent_Identity=26.4392324093817, Blast_Score=135, Evalue=6e-33,
Organism=Saccharomyces cerevisiae, GI6320748, Length=430, Percent_Identity=27.6744186046512, Blast_Score=142, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: =4.1.1.61 [H]

Molecular weight: Translated: 54252; Mature: 54121

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLKNRPEPYKDLREFLAQVEAIGELKTVKGASWDLEMGCLAELIYHNDQESPPAICFE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEC
DIPGYPGFRCVSGLTNSSQRLAITLGFPLSKNPLDIVQSYRDRMKVHEPLPPRFVSSEEA
CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PIYENVLRDDEIDILKFPIPKLHELDGGRYAGTDDLVIMQDPEDGWVNIGTYRSMVHDAR
CHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCEECHHHHHHHHHHH
SLGLWISPGKQGRQIRDKYFAQNKPCPVLICIGHDPLLFLASGNELAYGLSEFDYAGGHR
HCCEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEECHHHHCCCCCCC
GVPFEVVKSDVHGLPMPAHAEIVIEGEMHPGELRMEGPFGEFTGYYASNPSPQPVVRIQH
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCEEEEE
IYHRNNPIMTMASPMQPPSDFSFSKCVTKSGMIWDEVERAGLSGVRGVWCHEAGGARMFN
HHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCEEEE
IISIKQRYPGHARQALHLAASCQSASYLGRWVVVVDEDIDPTNTFDVLWAISTRCDPAQD
EEEEHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCH
VDFIRRAWSGPLDPMLNEADGTNSRGLIDACRPFERLKTFPPVARASDKFRNEIAEKFKH
HHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YLE
HCC
>Mature Secondary Structure 
TYLKNRPEPYKDLREFLAQVEAIGELKTVKGASWDLEMGCLAELIYHNDQESPPAICFE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEC
DIPGYPGFRCVSGLTNSSQRLAITLGFPLSKNPLDIVQSYRDRMKVHEPLPPRFVSSEEA
CCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PIYENVLRDDEIDILKFPIPKLHELDGGRYAGTDDLVIMQDPEDGWVNIGTYRSMVHDAR
CHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCCEECHHHHHHHHHHH
SLGLWISPGKQGRQIRDKYFAQNKPCPVLICIGHDPLLFLASGNELAYGLSEFDYAGGHR
HCCEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEECHHHHCCCCCCC
GVPFEVVKSDVHGLPMPAHAEIVIEGEMHPGELRMEGPFGEFTGYYASNPSPQPVVRIQH
CCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCEEEEE
IYHRNNPIMTMASPMQPPSDFSFSKCVTKSGMIWDEVERAGLSGVRGVWCHEAGGARMFN
HHCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCEEEE
IISIKQRYPGHARQALHLAASCQSASYLGRWVVVVDEDIDPTNTFDVLWAISTRCDPAQD
EEEEHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCH
VDFIRRAWSGPLDPMLNEADGTNSRGLIDACRPFERLKTFPPVARASDKFRNEIAEKFKH
HHHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YLE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]