| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635247
Identifier: 110635247
GI number: 110635247
Start: 3171937
End: 3173475
Strand: Reverse
Name: 110635247
Synonym: Meso_2918
Alternate gene names: NA
Gene position: 3173475-3171937 (Counterclockwise)
Preceding gene: 110635248
Following gene: 110635246
Centisome position: 71.92
GC content: 56.6
Gene sequence:
>1539_bases ATGGGATATGAAGACTTTCTTGCAAATGCGGCGCTTGGACTGGAGACAGCGCTGCTCCCAGCCAATTTGCTTTACTGCTT CATAGGTGTTTTTGTTGGAATGATCATCGGTGTGATCCCCGGGGTGGGTCCACTGGCCGCCATGTCCATTCTGTTCCCGA TTACCTTTTACGTAAGCCCAACTGCGGCGCTGATCATGCTGGCGGGTATTTATTACGGTTCTTCCTATGGCGGATCCATC ACCTCGATCTTGCTGAATGTTCCGGGAACACCAACAAGTGCAGTAACCTGCCTTGACGGCAATCCGATGGCCCGAAAGGG CCGCGCGGGGGTGGCGCTCATTACAACTACAATCGCGAGCTTCGTTGGTGGCAGTGTCGGCATCGCGCTAATGATGATGT TCTCGCCGCTCATCGTTGCACTGGCCCAAATGTTTAGCTCCGCAGAATATTTCTCGCTGATGGTTCTGGGGCTTTTGGCC GCCACCATCATAAGCGATGGCTCACAGGTCAAGGCCCTCGCCATGGTTGCTATGGGGCTTCTATTTGGCACCGTTGGGCT TGATCTGAACACCGGCATTCCACGCTATACCTTTGGTCTGATCGAATTGAGCGATGGAATCAGCCTTATTGCACTGGCCA TGGGTATCTTCGGGTTCTCCGAAATGATCTCCAGCCTCCGGGGAGTTAAGACGGGTGAAGTGCGAAGGGTGACCCTTAAG TCACTGATTCCGGCCCGAGACGACGTGCGACGTTGGCGCATGGCGATGGCCCGCGGCGCTGCTGTCGGTTCTTTTTTTGG GGCGCTTCCAGGCGTCGGGCCCGGTGTTGCCGCCTTCTTGGCGTATGCGCTGGAAAAGCGAGTCTCGCGTAACCCCGAAC GTTTCGGTCATGGGGCCGTCGAAGGCGTTGCTTCGCCGGAGGCAGCCAACAATGCCGCGGATCAGACAGCATTCATCCCC ACTATGACCCTAGGTATTCCCGGCAGCGCCACCATGGCATTGGTTCTGGGGGTTTTGATCATGCACGGAATCACCCCCGG ACCGCGGTTGCTCACTGAGCATCCAGATTTGTTCTGGGGCTTGGTCATGAGCTTCTGGGTTGGAAACCTCATGCTGTTGC TGCTCAATGTTCCACTCGTCGGCGTTTGGGTTCGGTTGCTGCAGATCCCCTATAAATGGCTCTACCCGGCAGTGGTGATG TTCATCTGCATTGGCGTGTACTCGGTCAATAACAGTGCATTCGATGTCATTCTCGCGCTGCTCTTCGGCGCACTCGGTTA TGGCCTGCGCGTCCTGGGCTTCTCGCCGGCGCCGTTGCTGCTGGGTTTCGTGCTTGGCCCGTTAATGGAGGAGCATTTTG TTCGCGCGATGGTCCTGGGACACGGCAATGTGTTGATCTTCCTCGAGCGCCCCATCAGCGCCGTCGTCATCGGAATCTCG GCCGTGCTGATTATATGGGGCGCCTATTCAACCATCAGGCAGTTTCGTCGGAACGCCCGGGTTCTCGAGCAACAGCAACA GCAACAGCCGTCGATCTGA
Upstream 100 bases:
>100_bases GGGCTAAATTCGGCTTGGCCATAGTGCTCAGCGCGCTGACTTTTGCCATCTTCAAATTGGGCCTTTCGTTGCCCGTACCC GCGGTGGAGTGGTCGTTCTG
Downstream 100 bases:
>100_bases ACGGAATTCGTAGATGAATGCACTCAGAATTGCAAAGCGGCATTGACCCGTCGCGATCGGGGTGGGCTGGTGTCAATCTT AGTGCATAATGGCTTTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MGYEDFLANAALGLETALLPANLLYCFIGVFVGMIIGVIPGVGPLAAMSILFPITFYVSPTAALIMLAGIYYGSSYGGSI TSILLNVPGTPTSAVTCLDGNPMARKGRAGVALITTTIASFVGGSVGIALMMMFSPLIVALAQMFSSAEYFSLMVLGLLA ATIISDGSQVKALAMVAMGLLFGTVGLDLNTGIPRYTFGLIELSDGISLIALAMGIFGFSEMISSLRGVKTGEVRRVTLK SLIPARDDVRRWRMAMARGAAVGSFFGALPGVGPGVAAFLAYALEKRVSRNPERFGHGAVEGVASPEAANNAADQTAFIP TMTLGIPGSATMALVLGVLIMHGITPGPRLLTEHPDLFWGLVMSFWVGNLMLLLLNVPLVGVWVRLLQIPYKWLYPAVVM FICIGVYSVNNSAFDVILALLFGALGYGLRVLGFSPAPLLLGFVLGPLMEEHFVRAMVLGHGNVLIFLERPISAVVIGIS AVLIIWGAYSTIRQFRRNARVLEQQQQQQPSI
Sequences:
>Translated_512_residues MGYEDFLANAALGLETALLPANLLYCFIGVFVGMIIGVIPGVGPLAAMSILFPITFYVSPTAALIMLAGIYYGSSYGGSI TSILLNVPGTPTSAVTCLDGNPMARKGRAGVALITTTIASFVGGSVGIALMMMFSPLIVALAQMFSSAEYFSLMVLGLLA ATIISDGSQVKALAMVAMGLLFGTVGLDLNTGIPRYTFGLIELSDGISLIALAMGIFGFSEMISSLRGVKTGEVRRVTLK SLIPARDDVRRWRMAMARGAAVGSFFGALPGVGPGVAAFLAYALEKRVSRNPERFGHGAVEGVASPEAANNAADQTAFIP TMTLGIPGSATMALVLGVLIMHGITPGPRLLTEHPDLFWGLVMSFWVGNLMLLLLNVPLVGVWVRLLQIPYKWLYPAVVM FICIGVYSVNNSAFDVILALLFGALGYGLRVLGFSPAPLLLGFVLGPLMEEHFVRAMVLGHGNVLIFLERPISAVVIGIS AVLIIWGAYSTIRQFRRNARVLEQQQQQQPSI >Mature_511_residues GYEDFLANAALGLETALLPANLLYCFIGVFVGMIIGVIPGVGPLAAMSILFPITFYVSPTAALIMLAGIYYGSSYGGSIT SILLNVPGTPTSAVTCLDGNPMARKGRAGVALITTTIASFVGGSVGIALMMMFSPLIVALAQMFSSAEYFSLMVLGLLAA TIISDGSQVKALAMVAMGLLFGTVGLDLNTGIPRYTFGLIELSDGISLIALAMGIFGFSEMISSLRGVKTGEVRRVTLKS LIPARDDVRRWRMAMARGAAVGSFFGALPGVGPGVAAFLAYALEKRVSRNPERFGHGAVEGVASPEAANNAADQTAFIPT MTLGIPGSATMALVLGVLIMHGITPGPRLLTEHPDLFWGLVMSFWVGNLMLLLLNVPLVGVWVRLLQIPYKWLYPAVVMF ICIGVYSVNNSAFDVILALLFGALGYGLRVLGFSPAPLLLGFVLGPLMEEHFVRAMVLGHGNVLIFLERPISAVVIGISA VLIIWGAYSTIRQFRRNARVLEQQQQQQPSI
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 54271; Mature: 54140
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYEDFLANAALGLETALLPANLLYCFIGVFVGMIIGVIPGVGPLAAMSILFPITFYVSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TAALIMLAGIYYGSSYGGSITSILLNVPGTPTSAVTCLDGNPMARKGRAGVALITTTIAS HHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH FVGGSVGIALMMMFSPLIVALAQMFSSAEYFSLMVLGLLAATIISDGSQVKALAMVAMGL HHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LFGTVGLDLNTGIPRYTFGLIELSDGISLIALAMGIFGFSEMISSLRGVKTGEVRRVTLK HHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLIPARDDVRRWRMAMARGAAVGSFFGALPGVGPGVAAFLAYALEKRVSRNPERFGHGAV HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHH EGVASPEAANNAADQTAFIPTMTLGIPGSATMALVLGVLIMHGITPGPRLLTEHPDLFWG HCCCCCCCCCCCCCCCEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHH LVMSFWVGNLMLLLLNVPLVGVWVRLLQIPYKWLYPAVVMFICIGVYSVNNSAFDVILAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFGALGYGLRVLGFSPAPLLLGFVLGPLMEEHFVRAMVLGHGNVLIFLERPISAVVIGIS HHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH AVLIIWGAYSTIRQFRRNARVLEQQQQQQPSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYEDFLANAALGLETALLPANLLYCFIGVFVGMIIGVIPGVGPLAAMSILFPITFYVSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TAALIMLAGIYYGSSYGGSITSILLNVPGTPTSAVTCLDGNPMARKGRAGVALITTTIAS HHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH FVGGSVGIALMMMFSPLIVALAQMFSSAEYFSLMVLGLLAATIISDGSQVKALAMVAMGL HHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LFGTVGLDLNTGIPRYTFGLIELSDGISLIALAMGIFGFSEMISSLRGVKTGEVRRVTLK HHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH SLIPARDDVRRWRMAMARGAAVGSFFGALPGVGPGVAAFLAYALEKRVSRNPERFGHGAV HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHH EGVASPEAANNAADQTAFIPTMTLGIPGSATMALVLGVLIMHGITPGPRLLTEHPDLFWG HCCCCCCCCCCCCCCCEECCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHH LVMSFWVGNLMLLLLNVPLVGVWVRLLQIPYKWLYPAVVMFICIGVYSVNNSAFDVILAL HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LFGALGYGLRVLGFSPAPLLLGFVLGPLMEEHFVRAMVLGHGNVLIFLERPISAVVIGIS HHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH AVLIIWGAYSTIRQFRRNARVLEQQQQQQPSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]