| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635225
Identifier: 110635225
GI number: 110635225
Start: 3146222
End: 3147082
Strand: Reverse
Name: 110635225
Synonym: Meso_2892
Alternate gene names: NA
Gene position: 3147082-3146222 (Counterclockwise)
Preceding gene: 110635226
Following gene: 110635224
Centisome position: 71.32
GC content: 58.3
Gene sequence:
>861_bases ATGAGCCGCAGGCCACGCCATCCGTGGCTGCGGCCGGCAGCCAATATCGGGCTGATCGCGGTGCTTCTCATCGCACTCAG CTTCCTGCCTCCAGACAACTCTCTTGCCGAGGTGCAGGAGAATGGCGTGCTCAAGCTCTGCGTGCCCGAAAGCTATCCGC CCCTTGTTCAAGCGGACGAGGACAGCCCCGGTTTTGATGTCGAACTCGCGGGCCTGATCGCCCAAGAGATCGGCGTCAGG CTCGTCGTCAATGTCATGCCGTCCATCGGACGGGACTTCAATCCACGTAATTGGCGCCTAACACGCGGCCAGTGCAACAT CATTGCCGGAGGCGTGGCGGATACTGTCCAAACGCAAGGTTTCCTGCAGACGCTGCCCACTCTTGCCGAGACCGGATGGG TTGGAATATCCCTTGACGGATCGTTGCCCGCGCGCGGCAGCTCTTGGGCCGTTTGGCCAGGCACCTCCGGCCTTGATCGC TTGGCTCTTTCCCGGTGGCTACGGGAAAACGATGTGAAGGCACGGCTGGTGAGTTCGCCGACGGAACTGCGGGCACTTCT TGATCGTGGCGAGATCGACGGCGCCATTACTGAACGGTTCGCGGCTTCGGCAACCGGCATCGACAACGGGAAATATCAGG TATTTTGGCTCCCGCCGGAAAGTTTCGAGCGCTTCCGCATGGCATTGGGGCTCTGGAAAGGGGACCAGACTCTTTACCGT GCCGTTAGGGCTGCTCTGAAAAAATTAGACTATAAGGTCAAAAATATCGGTTCTGAGTATGGACTTGTATACAATTTTCG GGTTACGTCTGAGCAGCTCGCGGCGAAGAATTTCACCTGCGGTCTTGCTCTAACGACCTGA
Upstream 100 bases:
>100_bases TCATCGATTTCAATCAGTTTCCCACGGTGCTGGGACCGGCCATAGTTCTGGGCATGGCGGTCATCTTCTTTGTGATCGCC CTCATCGACTTCAACCGCAC
Downstream 100 bases:
>100_bases TGAGTTGACTGCGAGACGCCGAGTGCAACTGTCGATCAACGGGGAGGGTCTTTGTGCCTCTAAGATTGCGGAGACTTATA CTAGCCTCAAGCTTTGGCCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSRRPRHPWLRPAANIGLIAVLLIALSFLPPDNSLAEVQENGVLKLCVPESYPPLVQADEDSPGFDVELAGLIAQEIGVR LVVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQGFLQTLPTLAETGWVGISLDGSLPARGSSWAVWPGTSGLDR LALSRWLRENDVKARLVSSPTELRALLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYR AVRAALKKLDYKVKNIGSEYGLVYNFRVTSEQLAAKNFTCGLALTT
Sequences:
>Translated_286_residues MSRRPRHPWLRPAANIGLIAVLLIALSFLPPDNSLAEVQENGVLKLCVPESYPPLVQADEDSPGFDVELAGLIAQEIGVR LVVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQGFLQTLPTLAETGWVGISLDGSLPARGSSWAVWPGTSGLDR LALSRWLRENDVKARLVSSPTELRALLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYR AVRAALKKLDYKVKNIGSEYGLVYNFRVTSEQLAAKNFTCGLALTT >Mature_285_residues SRRPRHPWLRPAANIGLIAVLLIALSFLPPDNSLAEVQENGVLKLCVPESYPPLVQADEDSPGFDVELAGLIAQEIGVRL VVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQGFLQTLPTLAETGWVGISLDGSLPARGSSWAVWPGTSGLDRL ALSRWLRENDVKARLVSSPTELRALLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYRA VRAALKKLDYKVKNIGSEYGLVYNFRVTSEQLAAKNFTCGLALTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31407; Mature: 31276
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRPRHPWLRPAANIGLIAVLLIALSFLPPDNSLAEVQENGVLKLCVPESYPPLVQADE CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCCCCEECCC DSPGFDVELAGLIAQEIGVRLVVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQG CCCCCCCHHHHHHHHHHHHHEEEEHHHHHCCCCCCCCEEEECCCEEEEECCCHHHHHHHH FLQTLPTLAETGWVGISLDGSLPARGSSWAVWPGTSGLDRLALSRWLRENDVKARLVSSP HHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCH TELRALLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYR HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHH AVRAALKKLDYKVKNIGSEYGLVYNFRVTSEQLAAKNFTCGLALTT HHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHCCCEEEEEECC >Mature Secondary Structure SRRPRHPWLRPAANIGLIAVLLIALSFLPPDNSLAEVQENGVLKLCVPESYPPLVQADE CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCCCCEECCC DSPGFDVELAGLIAQEIGVRLVVNVMPSIGRDFNPRNWRLTRGQCNIIAGGVADTVQTQG CCCCCCCHHHHHHHHHHHHHEEEEHHHHHCCCCCCCCEEEECCCEEEEECCCHHHHHHHH FLQTLPTLAETGWVGISLDGSLPARGSSWAVWPGTSGLDRLALSRWLRENDVKARLVSSP HHHHHHHHHHCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCH TELRALLDRGEIDGAITERFAASATGIDNGKYQVFWLPPESFERFRMALGLWKGDQTLYR HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHH AVRAALKKLDYKVKNIGSEYGLVYNFRVTSEQLAAKNFTCGLALTT HHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA