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The map label for this gene is yjbG [H]

Identifier: 110635064

GI number: 110635064

Start: 2968226

End: 2970076

Strand: Reverse

Name: yjbG [H]

Synonym: Meso_2730

Alternate gene names: 110635064

Gene position: 2970076-2968226 (Counterclockwise)

Preceding gene: 110635067

Following gene: 110635063

Centisome position: 67.31

GC content: 61.05

Gene sequence:

>1851_bases
ATGGCTCACTATCCGAAAACGCCCGCGGGCCTGGCCCAAGCGACCGAAGCCGGAGCAAGGAAAGCCGATCTCGGCGCCTT
ACCCGAATGGAATCTGGCCGACCTCTACCCCTCTATGGACAGCACTGAGTTTTCTGAAGATCTAGCGCGCGCGGCGCGGG
AGGCGACGGCCTTTGAGCAGAATTGGAAAGGCCGCCTCGCCGAGGAGGCTGGCAAGGGCACGAGCGGACGCCTGGGCGAG
GCCGTGCGCGAATACGAAGCGCTGGATGAGCTCTTCGGGCGCATTGGTTCCTATGCCGGGCTTCTTTACACGGGTGACAC
TTCCGATCCGAAGCGCGCGAAATTCTATGGCGACGTGCAGGAGAAGCTGACGGATGCAAGCACGCATCTGCTTTTCTTCA
CGCTGGAGCTCAACAAGATCGACGACGCGTTGATCGAAGCCGCGATGAAGGACGACCCGATTTTCGGCCACTACAGGCCC
TGGGTGCTCGACATCCGCAAATACCGGCCGCACCAGCTCGAGGATAGTATAGAGCGGCTTTTTCATGAAAGCGACGTGAC
AGGACGCGGCGCCTGGAACCGCCTCTTCGACGAGACTATGACCGGTCTGCGCTTCGATGTGGACGGCGAGGAGCTGACGC
TGGAGCCGACGCTGAACCTGATGCAGGATCCCGACGGCGAGAAACGCCGCAAGGCTGCGGCGGCGCTGGCGGTCACGCTC
AAGGACAATATGCGCCTTTTCACGCTGATCACCAACACGCTCGCCAAGGACAAGGAGATTTCCGACCGCTGGCGCAATTT
CGCCGATGTGGCGGATTCCCGCCACCTTTCGAACCGCGTGGAACGCGAAGTGGTGGAAGCGTTGGCTGCCTCTGTTTGCG
CAGCCTTCCCGCGCATTTCCCACCGCTACTATGCGATGAAGGCGAAGTGGCTGGGCATGGAAAAGCTCAACCATTGGGAC
CGCAACGCACCCCTTCCCGAAACGCCGCAATCCGTCATTGGTTGGGACGAGGCGAAGGAAACGGTGCTTTCCGCCTATGC
CAGTTTCGCGCCCGAAATGGCGGACATCGCCAAACACTTTTTCGACCGCAACTGGATCGATGCGCCGGTGCGCCCGGGAA
AATCGCCGGGCGCCTTCGCGCATCCGACTGTCCCTTCGGTGCACCCCTATGTGATGCTCAATTATATGGGCAAGCCCCGC
GATGTGATGACGCTCGCCCATGAGCTCGGCCACGGCGTACACCAGGTGCTGGCGGCCGGTCAGGGCTCGCTCATGGCGGC
GACCCCGCTCACTTTGGCCGAAACGGCCTCTGTCTTCGGCGAAATGCTTACCTTCCGCTCGCTGCTCGCCCGCACGACAG
ACAAGCGCGAGCGCAAGGCGATGCTCGCACAGAAGGCGGAGGACATGATCAACACGGTCGTGCGCCAGATCGCTTTCTAC
GAATTCGAACGCAAGGTGCATACGGAGCGCCGGCAGGGCGAGCTCACCGCCGACCGTATCGGCGAAATCTGGCTGGAGGT
TCAGGCGGAGAGCCTCGGCCCGGCAATCGCCCTGCGCGAGGGATACGAAACCTTCTGGGCCTATATCCCGCACTTCATCC
ATTCGCCGTTCTATGTTTACGCCTACGCTTTCGGCGACTGTCTCGTGAATTCGCTCTTTGCCGTCTACCAGCAGGCGGAG
AAGGGTTTTCAGGAAAAATATTTCGAGATGCTGAAAGCGGGCGGCACGAAACATCATTCCGAGCTTCTGGCGCCCTTCGG
CCTGGATGCATCCGACCCCGCCTTCTGGACCAAGGGCCTCTCGGTCATCGAAAGCTTGATCGACGAACTGGAAGCGCTGG
AGGAAGGCTGA

Upstream 100 bases:

>100_bases
AGGCTAGAACTATATGACATTGGCTTCTAAACAGGCGCTCAAGAAACCCGGTGAACGAATCCTTGATCCGGCACACGCGT
CATCCGAGAGGAACCATCCC

Downstream 100 bases:

>100_bases
TCGCCTTTGAAGGAGATGTGCCAGCCCTCGCGCGCTACTACCCTAGCGCTCTTCCGCAACGACCTTACGGATGAGACCCT
GTGCTTCTCCGTGCCGGAGG

Product: pepF/M3 family oligoendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MAHYPKTPAGLAQATEAGARKADLGALPEWNLADLYPSMDSTEFSEDLARAAREATAFEQNWKGRLAEEAGKGTSGRLGE
AVREYEALDELFGRIGSYAGLLYTGDTSDPKRAKFYGDVQEKLTDASTHLLFFTLELNKIDDALIEAAMKDDPIFGHYRP
WVLDIRKYRPHQLEDSIERLFHESDVTGRGAWNRLFDETMTGLRFDVDGEELTLEPTLNLMQDPDGEKRRKAAAALAVTL
KDNMRLFTLITNTLAKDKEISDRWRNFADVADSRHLSNRVEREVVEALAASVCAAFPRISHRYYAMKAKWLGMEKLNHWD
RNAPLPETPQSVIGWDEAKETVLSAYASFAPEMADIAKHFFDRNWIDAPVRPGKSPGAFAHPTVPSVHPYVMLNYMGKPR
DVMTLAHELGHGVHQVLAAGQGSLMAATPLTLAETASVFGEMLTFRSLLARTTDKRERKAMLAQKAEDMINTVVRQIAFY
EFERKVHTERRQGELTADRIGEIWLEVQAESLGPAIALREGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLFAVYQQAE
KGFQEKYFEMLKAGGTKHHSELLAPFGLDASDPAFWTKGLSVIESLIDELEALEEG

Sequences:

>Translated_616_residues
MAHYPKTPAGLAQATEAGARKADLGALPEWNLADLYPSMDSTEFSEDLARAAREATAFEQNWKGRLAEEAGKGTSGRLGE
AVREYEALDELFGRIGSYAGLLYTGDTSDPKRAKFYGDVQEKLTDASTHLLFFTLELNKIDDALIEAAMKDDPIFGHYRP
WVLDIRKYRPHQLEDSIERLFHESDVTGRGAWNRLFDETMTGLRFDVDGEELTLEPTLNLMQDPDGEKRRKAAAALAVTL
KDNMRLFTLITNTLAKDKEISDRWRNFADVADSRHLSNRVEREVVEALAASVCAAFPRISHRYYAMKAKWLGMEKLNHWD
RNAPLPETPQSVIGWDEAKETVLSAYASFAPEMADIAKHFFDRNWIDAPVRPGKSPGAFAHPTVPSVHPYVMLNYMGKPR
DVMTLAHELGHGVHQVLAAGQGSLMAATPLTLAETASVFGEMLTFRSLLARTTDKRERKAMLAQKAEDMINTVVRQIAFY
EFERKVHTERRQGELTADRIGEIWLEVQAESLGPAIALREGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLFAVYQQAE
KGFQEKYFEMLKAGGTKHHSELLAPFGLDASDPAFWTKGLSVIESLIDELEALEEG
>Mature_615_residues
AHYPKTPAGLAQATEAGARKADLGALPEWNLADLYPSMDSTEFSEDLARAAREATAFEQNWKGRLAEEAGKGTSGRLGEA
VREYEALDELFGRIGSYAGLLYTGDTSDPKRAKFYGDVQEKLTDASTHLLFFTLELNKIDDALIEAAMKDDPIFGHYRPW
VLDIRKYRPHQLEDSIERLFHESDVTGRGAWNRLFDETMTGLRFDVDGEELTLEPTLNLMQDPDGEKRRKAAAALAVTLK
DNMRLFTLITNTLAKDKEISDRWRNFADVADSRHLSNRVEREVVEALAASVCAAFPRISHRYYAMKAKWLGMEKLNHWDR
NAPLPETPQSVIGWDEAKETVLSAYASFAPEMADIAKHFFDRNWIDAPVRPGKSPGAFAHPTVPSVHPYVMLNYMGKPRD
VMTLAHELGHGVHQVLAAGQGSLMAATPLTLAETASVFGEMLTFRSLLARTTDKRERKAMLAQKAEDMINTVVRQIAFYE
FERKVHTERRQGELTADRIGEIWLEVQAESLGPAIALREGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLFAVYQQAEK
GFQEKYFEMLKAGGTKHHSELLAPFGLDASDPAFWTKGLSVIESLIDELEALEEG

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69273; Mature: 69142

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHYPKTPAGLAQATEAGARKADLGALPEWNLADLYPSMDSTEFSEDLARAAREATAFEQ
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NWKGRLAEEAGKGTSGRLGEAVREYEALDELFGRIGSYAGLLYTGDTSDPKRAKFYGDVQ
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
EKLTDASTHLLFFTLELNKIDDALIEAAMKDDPIFGHYRPWVLDIRKYRPHQLEDSIERL
HHHHCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
FHESDVTGRGAWNRLFDETMTGLRFDVDGEELTLEPTLNLMQDPDGEKRRKAAAALAVTL
HHHCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHCCCCCHHHHHHHHHHEEEE
KDNMRLFTLITNTLAKDKEISDRWRNFADVADSRHLSNRVEREVVEALAASVCAAFPRIS
CCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRYYAMKAKWLGMEKLNHWDRNAPLPETPQSVIGWDEAKETVLSAYASFAPEMADIAKHF
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHH
FDRNWIDAPVRPGKSPGAFAHPTVPSVHPYVMLNYMGKPRDVMTLAHELGHGVHQVLAAG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHCC
QGSLMAATPLTLAETASVFGEMLTFRSLLARTTDKRERKAMLAQKAEDMINTVVRQIAFY
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFERKVHTERRQGELTADRIGEIWLEVQAESLGPAIALREGYETFWAYIPHFIHSPFYVY
HHHHHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AYAFGDCLVNSLFAVYQQAEKGFQEKYFEMLKAGGTKHHSELLAPFGLDASDPAFWTKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHH
SVIESLIDELEALEEG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHYPKTPAGLAQATEAGARKADLGALPEWNLADLYPSMDSTEFSEDLARAAREATAFEQ
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NWKGRLAEEAGKGTSGRLGEAVREYEALDELFGRIGSYAGLLYTGDTSDPKRAKFYGDVQ
HCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
EKLTDASTHLLFFTLELNKIDDALIEAAMKDDPIFGHYRPWVLDIRKYRPHQLEDSIERL
HHHHCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHH
FHESDVTGRGAWNRLFDETMTGLRFDVDGEELTLEPTLNLMQDPDGEKRRKAAAALAVTL
HHHCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHCCCCCHHHHHHHHHHEEEE
KDNMRLFTLITNTLAKDKEISDRWRNFADVADSRHLSNRVEREVVEALAASVCAAFPRIS
CCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRYYAMKAKWLGMEKLNHWDRNAPLPETPQSVIGWDEAKETVLSAYASFAPEMADIAKHF
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHH
FDRNWIDAPVRPGKSPGAFAHPTVPSVHPYVMLNYMGKPRDVMTLAHELGHGVHQVLAAG
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHCC
QGSLMAATPLTLAETASVFGEMLTFRSLLARTTDKRERKAMLAQKAEDMINTVVRQIAFY
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EFERKVHTERRQGELTADRIGEIWLEVQAESLGPAIALREGYETFWAYIPHFIHSPFYVY
HHHHHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
AYAFGDCLVNSLFAVYQQAEKGFQEKYFEMLKAGGTKHHSELLAPFGLDASDPAFWTKGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHH
SVIESLIDELEALEEG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]