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The map label for this gene is omp10 [H]

Identifier: 110635060

GI number: 110635060

Start: 2964749

End: 2965105

Strand: Reverse

Name: omp10 [H]

Synonym: Meso_2726

Alternate gene names: 110635060

Gene position: 2965105-2964749 (Counterclockwise)

Preceding gene: 110635061

Following gene: 110635059

Centisome position: 67.2

GC content: 64.99

Gene sequence:

>357_bases
ATGATTTCCTTTCGCTCAGCGGCAAGCTTCGCGGGTCTGGCTGCCGCACTCATCATTTCCGGCTGCGTCGGCATGCCCCG
CTCGGCGGAGTCCGCCCTTGAGGGTCAGTGGGTCGACGCACAGGGCGTCGGCGTTTCTACGTTCTCGGGCGGCCAGTTCG
CCACGGTCGCCAGCGACACCGGCAATCGGCTGTCCCAGGGCACTTACCGGTTCCGCGATGGGCAAACGGTCGAAATCTCG
ATGACCTCGCTGATTCGCCAGACGCAGACGAACTTGACCTGCTCGCTCACAACGCCGAACCAGCTTAGCTGCACCAGCGC
GCAAGGCCAGCGCTTCGTCCTGACCCGCCGCGCCTGA

Upstream 100 bases:

>100_bases
CGCAACATCCTCGTGCGGTAATGCTCCTCTGACCGCATGACGGGTTGCATTCGCGGCAAAAGTGCGGCGAATGGAAATGT
CACTTACAGAGGAGGCGGGT

Downstream 100 bases:

>100_bases
CGAGCACCAATACGGCATGGGATCGCCCGGTTACGGCCGGGCACCCGGTATTGCCAATCTTCAATCGGAACAGCGTTGCG
CCGGCTAATTGCAGGGGGCG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MISFRSAASFAGLAAALIISGCVGMPRSAESALEGQWVDAQGVGVSTFSGGQFATVASDTGNRLSQGTYRFRDGQTVEIS
MTSLIRQTQTNLTCSLTTPNQLSCTSAQGQRFVLTRRA

Sequences:

>Translated_118_residues
MISFRSAASFAGLAAALIISGCVGMPRSAESALEGQWVDAQGVGVSTFSGGQFATVASDTGNRLSQGTYRFRDGQTVEIS
MTSLIRQTQTNLTCSLTTPNQLSCTSAQGQRFVLTRRA
>Mature_118_residues
MISFRSAASFAGLAAALIISGCVGMPRSAESALEGQWVDAQGVGVSTFSGGQFATVASDTGNRLSQGTYRFRDGQTVEIS
MTSLIRQTQTNLTCSLTTPNQLSCTSAQGQRFVLTRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp10 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12417; Mature: 12417

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFRSAASFAGLAAALIISGCVGMPRSAESALEGQWVDAQGVGVSTFSGGQFATVASDT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEECCCCCCEEEECCCEEEEEECCC
GNRLSQGTYRFRDGQTVEISMTSLIRQTQTNLTCSLTTPNQLSCTSAQGQRFVLTRRA
CCCCCCCEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEEEECC
>Mature Secondary Structure
MISFRSAASFAGLAAALIISGCVGMPRSAESALEGQWVDAQGVGVSTFSGGQFATVASDT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEECCCCCCEEEECCCEEEEEECCC
GNRLSQGTYRFRDGQTVEISMTSLIRQTQTNLTCSLTTPNQLSCTSAQGQRFVLTRRA
CCCCCCCEEEECCCCEEEEEHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]