| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635030
Identifier: 110635030
GI number: 110635030
Start: 2928767
End: 2929702
Strand: Reverse
Name: 110635030
Synonym: Meso_2696
Alternate gene names: NA
Gene position: 2929702-2928767 (Counterclockwise)
Preceding gene: 110635031
Following gene: 110635029
Centisome position: 66.4
GC content: 62.82
Gene sequence:
>936_bases ATGCAGACAGAGATCTTGACCGAAGCCTGGTCCCTGACCGACGAATGGTGGCAGTTGTGGTGGCGCGATCCGGACGCGAC GCCGTTTCAAAGTCCCGCGTGGCTGCTGCCCTGGCGCCGGCACTTCGACAGGGGCGAAAGCCTCGTCTTGACACTGCGCA GGGACGGCGAACTTGTCGGCCTCCTTCCCATGATGCGTCTTGACGGGCGGCTGATCCTCTGGGGCGCCGGAACCTCCGAT TGGCTTGGTGGGCTGTTCGACCCGTCCTTGGAGCGGCAGGCGATTGCGTCCGCAGTCGCCAGGATCGAAGAACCACTTGA TCTTTTCCAGTTGCCCGAAACCTCTCCGCTTCGGCGCTTGCCTGCGCCGGAAGGCTGGGAGGACAGGCAGGGACTTTCGG AAAGCTGCGCCGTGCTTTCATTGCCACCCCAGCTCAGTCCCAATATGCGCCAGAACCTTCGCTACTATGCGCGGCGCGCA GCACGCGAAGGCGTGCGCAGGCCGGAACGGGTCGGACCCGAGCATATGAGGAGCCTTGCCGATCTGCATACGCGCCGCTG GCAAAACCGGCAGGAACCAGGCGTGTTTGCTGATCCGCGCGTCCTCTCCTGGCTCGAGGAGGCGGCGATATCCTTGGATA AAGCCGGTCTGCTGCGGCTCTACGCGATGCGCATGGGCGGGCAGGTCGTAGCCGCGCTCTGCGTGCTGCAAGCGAAATCC AGGGCGTTTTATTATATCGGTGGCTTCGACCCGGAGCATGCAAAGCTCGGGCTTGGTACCGTGCTCGTCGGCCATGCCAT CGGCGAGGCGGAGCGCGAGGAATCAAAGTCTTTCGACTTTCTGCGTGGGCAAGAAGATTACAAATATCGCTGGGGCGCCG AGAACCGGCCCACTTATTCCCGCAGCCTCGCTCCATCAATGAGGAGGGCGGCATGA
Upstream 100 bases:
>100_bases CGCCGGTCGGCTGATTTCGGCTGATCTCCAGAACAATCCGCTTTCGTATCGGTTGGGCGGTGAGCCGGGCGGGGTTCCGG CAACCAACGGCAGTTCCGAT
Downstream 100 bases:
>100_bases CGGAAAAGCTCGGCATTCGTTGGACGGTTGGCGCTGTCTCGCCGCGCGGTTTCGAGGCGTTGCGGCTTTCTCTCTGGGGC GCGCGTCTCGCTTTCGGCGA
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQTEILTEAWSLTDEWWQLWWRDPDATPFQSPAWLLPWRRHFDRGESLVLTLRRDGELVGLLPMMRLDGRLILWGAGTSD WLGGLFDPSLERQAIASAVARIEEPLDLFQLPETSPLRRLPAPEGWEDRQGLSESCAVLSLPPQLSPNMRQNLRYYARRA AREGVRRPERVGPEHMRSLADLHTRRWQNRQEPGVFADPRVLSWLEEAAISLDKAGLLRLYAMRMGGQVVAALCVLQAKS RAFYYIGGFDPEHAKLGLGTVLVGHAIGEAEREESKSFDFLRGQEDYKYRWGAENRPTYSRSLAPSMRRAA
Sequences:
>Translated_311_residues MQTEILTEAWSLTDEWWQLWWRDPDATPFQSPAWLLPWRRHFDRGESLVLTLRRDGELVGLLPMMRLDGRLILWGAGTSD WLGGLFDPSLERQAIASAVARIEEPLDLFQLPETSPLRRLPAPEGWEDRQGLSESCAVLSLPPQLSPNMRQNLRYYARRA AREGVRRPERVGPEHMRSLADLHTRRWQNRQEPGVFADPRVLSWLEEAAISLDKAGLLRLYAMRMGGQVVAALCVLQAKS RAFYYIGGFDPEHAKLGLGTVLVGHAIGEAEREESKSFDFLRGQEDYKYRWGAENRPTYSRSLAPSMRRAA >Mature_311_residues MQTEILTEAWSLTDEWWQLWWRDPDATPFQSPAWLLPWRRHFDRGESLVLTLRRDGELVGLLPMMRLDGRLILWGAGTSD WLGGLFDPSLERQAIASAVARIEEPLDLFQLPETSPLRRLPAPEGWEDRQGLSESCAVLSLPPQLSPNMRQNLRYYARRA AREGVRRPERVGPEHMRSLADLHTRRWQNRQEPGVFADPRVLSWLEEAAISLDKAGLLRLYAMRMGGQVVAALCVLQAKS RAFYYIGGFDPEHAKLGLGTVLVGHAIGEAEREESKSFDFLRGQEDYKYRWGAENRPTYSRSLAPSMRRAA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35593; Mature: 35593
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTEILTEAWSLTDEWWQLWWRDPDATPFQSPAWLLPWRRHFDRGESLVLTLRRDGELVG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEECCCCEEE LLPMMRLDGRLILWGAGTSDWLGGLFDPSLERQAIASAVARIEEPLDLFQLPETSPLRRL HHHHHHCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC PAPEGWEDRQGLSESCAVLSLPPQLSPNMRQNLRYYARRAAREGVRRPERVGPEHMRSLA CCCCCCCHHCCHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHH DLHTRRWQNRQEPGVFADPRVLSWLEEAAISLDKAGLLRLYAMRMGGQVVAALCVLQAKS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC RAFYYIGGFDPEHAKLGLGTVLVGHAIGEAEREESKSFDFLRGQEDYKYRWGAENRPTYS CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCCCCCCH RSLAPSMRRAA HHHCCHHHHCC >Mature Secondary Structure MQTEILTEAWSLTDEWWQLWWRDPDATPFQSPAWLLPWRRHFDRGESLVLTLRRDGELVG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHCCCCCEEEEEEECCCCEEE LLPMMRLDGRLILWGAGTSDWLGGLFDPSLERQAIASAVARIEEPLDLFQLPETSPLRRL HHHHHHCCCEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCC PAPEGWEDRQGLSESCAVLSLPPQLSPNMRQNLRYYARRAAREGVRRPERVGPEHMRSLA CCCCCCCHHCCHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHH DLHTRRWQNRQEPGVFADPRVLSWLEEAAISLDKAGLLRLYAMRMGGQVVAALCVLQAKS HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC RAFYYIGGFDPEHAKLGLGTVLVGHAIGEAEREESKSFDFLRGQEDYKYRWGAENRPTYS CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEECCCCCCCCCH RSLAPSMRRAA HHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA