| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635025
Identifier: 110635025
GI number: 110635025
Start: 2923680
End: 2924519
Strand: Reverse
Name: 110635025
Synonym: Meso_2691
Alternate gene names: NA
Gene position: 2924519-2923680 (Counterclockwise)
Preceding gene: 110635026
Following gene: 110635024
Centisome position: 66.28
GC content: 63.1
Gene sequence:
>840_bases ATGTGGGGAATCATTCCGGCTGCAGGATGTGGAAGCCGCATTCAGCCACTCGCGTTCTCCAAGGAACTTCTGCCGGTAGG TAGCCGATTGACTGGCGGGTCGGAGCGCCCCTGCGCGGTAAGCGAATATCTTTGTGAACGCATGATCGCGGGCGGCGCGG ACAAGCTCTGCTTCGTCATCGCGCCGGGCAAATCCGATATCCTCGAATACTACGGCGGCAGCTACGGAGACGCTTCCATA GCTTATGTGGTGCAGCCGGAGGCGAGCGGGCTTTGCGACGCCATCTTCCGCGTTGCGCCACTGGTCGCTCCCGGTGAACA TGTGCTCGTCGGTCTGCCGGATACGATCTGGATGCCTGCGGACGGCTATCGGGCACTTCCCGACGGGCTGCTCTCCTTCC TGCTTTTTCCCGTCGGCAATCCCTCGGTCTTCGATGCGGTGGAAACCGACGAGGACGGAAATGTCCGCGAAATCCAGGTC AAACGGCAGGACGCATCGACGAACTGGATCTGGGGCGCGTTCAAGATGCCGGGCGCCATTTTCCACGAGCTCCTGGCCCT GTGGATCGAGCGTGGCCGCTCCGATGAATATATGGGCACGCTGGTCAACGCCTATCTCGCGAAGGGCGGGAGAGCTCAAG GCATCCGCGCCGGCGAGGCCTATGTGGATGTAGGCACGCTCGAAGGCTACCGCGCCGCCAACGACCTGTTGCGGCAGGCC GCTGTTGAGCAGGGGGCGCCCGGCACCCATGTCACCGCGGGTGCTCCGGCCGGGCGCCAGCTTCTCGCGCATCGCCGCGA ACTCGTGATGTCCTTCAAGCAAGTGGAACGAGGGGTTTGA
Upstream 100 bases:
>100_bases TACCTCGGAACATCGCGCCGCTGAGTTCGAAACTATCGCCAACGACCTCAAATCAGTCGCCGCCGGTGAGGCGGCATAGA GCTGGCAAGGAGATATTCCC
Downstream 100 bases:
>100_bases CTGATGATCGAAGCCGCGATGATCTGGAACGAGCCGAACAACAAGTCTCATTGGGATCCCGAAATCGATCCCGACTGGTC GCGGTTCGCGGAAATGGCAA
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UTP-Glucose-1-Phosphate Thymidylyltransferase; Nucleotidyltransferase; Glucose-1-Phosphate Thymidylyltransferase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MWGIIPAAGCGSRIQPLAFSKELLPVGSRLTGGSERPCAVSEYLCERMIAGGADKLCFVIAPGKSDILEYYGGSYGDASI AYVVQPEASGLCDAIFRVAPLVAPGEHVLVGLPDTIWMPADGYRALPDGLLSFLLFPVGNPSVFDAVETDEDGNVREIQV KRQDASTNWIWGAFKMPGAIFHELLALWIERGRSDEYMGTLVNAYLAKGGRAQGIRAGEAYVDVGTLEGYRAANDLLRQA AVEQGAPGTHVTAGAPAGRQLLAHRRELVMSFKQVERGV
Sequences:
>Translated_279_residues MWGIIPAAGCGSRIQPLAFSKELLPVGSRLTGGSERPCAVSEYLCERMIAGGADKLCFVIAPGKSDILEYYGGSYGDASI AYVVQPEASGLCDAIFRVAPLVAPGEHVLVGLPDTIWMPADGYRALPDGLLSFLLFPVGNPSVFDAVETDEDGNVREIQV KRQDASTNWIWGAFKMPGAIFHELLALWIERGRSDEYMGTLVNAYLAKGGRAQGIRAGEAYVDVGTLEGYRAANDLLRQA AVEQGAPGTHVTAGAPAGRQLLAHRRELVMSFKQVERGV >Mature_279_residues MWGIIPAAGCGSRIQPLAFSKELLPVGSRLTGGSERPCAVSEYLCERMIAGGADKLCFVIAPGKSDILEYYGGSYGDASI AYVVQPEASGLCDAIFRVAPLVAPGEHVLVGLPDTIWMPADGYRALPDGLLSFLLFPVGNPSVFDAVETDEDGNVREIQV KRQDASTNWIWGAFKMPGAIFHELLALWIERGRSDEYMGTLVNAYLAKGGRAQGIRAGEAYVDVGTLEGYRAANDLLRQA AVEQGAPGTHVTAGAPAGRQLLAHRRELVMSFKQVERGV
Specific function: Unknown
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29883; Mature: 29883
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGIIPAAGCGSRIQPLAFSKELLPVGSRLTGGSERPCAVSEYLCERMIAGGADKLCFVI CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE APGKSDILEYYGGSYGDASIAYVVQPEASGLCDAIFRVAPLVAPGEHVLVGLPDTIWMPA ECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECC DGYRALPDGLLSFLLFPVGNPSVFDAVETDEDGNVREIQVKRQDASTNWIWGAFKMPGAI CCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHH FHELLALWIERGRSDEYMGTLVNAYLAKGGRAQGIRAGEAYVDVGTLEGYRAANDLLRQA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHH AVEQGAPGTHVTAGAPAGRQLLAHRRELVMSFKQVERGV HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWGIIPAAGCGSRIQPLAFSKELLPVGSRLTGGSERPCAVSEYLCERMIAGGADKLCFVI CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEE APGKSDILEYYGGSYGDASIAYVVQPEASGLCDAIFRVAPLVAPGEHVLVGLPDTIWMPA ECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEECC DGYRALPDGLLSFLLFPVGNPSVFDAVETDEDGNVREIQVKRQDASTNWIWGAFKMPGAI CCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCHHH FHELLALWIERGRSDEYMGTLVNAYLAKGGRAQGIRAGEAYVDVGTLEGYRAANDLLRQA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCCCCHHHHHHHHHHH AVEQGAPGTHVTAGAPAGRQLLAHRRELVMSFKQVERGV HHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA