| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is treY [H]
Identifier: 110635007
GI number: 110635007
Start: 2899258
End: 2901828
Strand: Reverse
Name: treY [H]
Synonym: Meso_2673
Alternate gene names: 110635007
Gene position: 2901828-2899258 (Counterclockwise)
Preceding gene: 110635008
Following gene: 110635004
Centisome position: 65.76
GC content: 62.82
Gene sequence:
>2571_bases ATGACAATCCCGTGCGCCACCTATCGGCTGCAATTCCGTGAAGGAATGACCTTCGAAAGAGCGGCGGAGATCGTGCCCTA TCTGGCCGAGCTCGGCGTTAGCCACGTCTATGCCTCGCCCATTTTCACCGCCGCGTCCGGCTCGACACATGGCTATGACG TAGCAGACCACCAGGAGCTCGATCCCGTGCTCGGCGGGGTGGAGGGCTTTGCCTTGCTGGCGAAGGCGTTGAAGGAGCAC GGACTCGGGCTGCTCCTGGACATCGTGCCCAACCATATGGCGGTCTCGACGGTCAATCCCTGGTGGCGGGATGTGCTGAA ACACGGCCCGGAAAGCCGCTTTGCCAGTCATTTCGACATAAACTGGCAGGCTCCAAAGCTGCTTCTTCCTGTTTTGGGCG AGCCCTATGGCGAGGCGCTGAGAGAGGGAAAGCTCGTGCTCAGGATGGACGAGGAAACCGGCGAGCCGGTCTTTGGCTAT TACGACCTCTCGCTCCCCCTTTCGCCGGAAACCCTTTCTCTCCTCTTGCAGGACGGGGATGCCGGCGATGCCGAAGCCCT CGCTCTAACATTGCAAAAAGCGAATGAAGACAAGGACCTCCTGCACCGGGTTCATGAAGCGCAAAGCTGGCGGCTCGCCT ATTGGCGCCTGGCGCGCGAGGCGCTCACCTATCGCCGTTTCTTCGAGATAGCGGATCTGATCGGCGTAAGGGTGGAAGAT CCGGCGGTCTTCGCCGATGTGCACAAGCTGCCGCTGCGGCTCGTCAAGGAAGGGATCGTCGACGGCCTGCGCATAGATCA CATCGACGGGCTTGCCGATCCGAAGGGCTACTTGGCGGCGCTGCGGAAGGCTTCGGGACTCGAATATGTGCTGGTGGAAA AAATCCTCGGACCGGATGAGGACCTGCGGCCAGAGTGGCGCTGCGCCGGAACCACCGGCTACGAGGTGGCGCGGCTGATC ACGGCCTTGCAGGTGGAGCCTAGCCAGCGCGAGGCGATGGATAAAGGCTGGAGCCGCTTTACGGGCAATGACGCCCAGTT CTCGAGCCAGGTGCTTGCCGCCAAGCGGCGTATCCTGACCGTCAATCTCGCCGGCGAGCTGGACGGGCTCGTCCGCCTTG CCGAAGCGATTGCCATTGAGGATATCGCCACGCGCGATTTCGGCCGCGATGCCCTGCGGCTTGCGATCGTGGAGCTTGCC TCCGCCATGCCCGTCTACCGGACCTATATCGACAAGGACGGCGCCTCAGAGGAGGATCGGGCGCTGATGGAGAAAGCCGT CAGCCGAGTGGAGCGCGGACGCGAGGTGGAGGACGATCGCGTGATCGCCTTCATCGCCTCGCTGCTTCTCGATCCCACGA AGGGGTCGAAGATGCGAGCGGAATTCATCACCCGGTTCCAGCAGACGACCGGGCCTCTGATGGCGAAGGCGGTCGAGGAT ACGGTGTTCTATCGGTTCAACCGGCTGATCGCGCTTAACGAAGTGGGGGCGGAGCCGGATGAGTTCGGCCTTGGTCCGGA AACCTTCCACGACGCCATGACCAAACGTGCCGAAAGCTGGCCGCATGCGCTTTCGGCGACTGCCACGCATGATACGAAGC GAGGCGAGGACGCACGCGCCCGGCTTGCCGTCATCAGCGAGATGCCGCAGGAGTGGGCGGCCGCCGTATCGCGCTGGCAT GAAGCCGCGGAGGAGTTGCGGATAGAGCTGCCACGCGGGGCAGCGCCGACGCCCGGCACCGAATGGCTGCTTTATCAGGC GCTGGCTGGAGCTTGGCCCGCGGACCTTTCGCTACAGGACGAGGAAGGTCTTCAGGAGTTGGCCGAGCGTCTCGTCGCCT TCATGACCAAAGCCCTGCGGGAGGCCAAACGGCAGACGAGCTGGACCGACCAGAACGAGCCCTACGAGACGGCGGTCGAA AACTACGTGCGCGGAATTTTCGCGCCGGAACGCCGCAGCTTCCTTCGGGAGGTCCGTGCAATCGTCGCGGTCATCGAGCC CGCTGGCATTGTCAACAGCCTGGCGCAGCTGGTGATGAAACTTACCCTGCCAGGGGTGCCGGATATCTATCAGGGATGCG AACTTCTCGACTACAGCATGGTCGATCCCGACAACCGCCGGCCGGTCGACTTCGAACTGCGGCGGATGCTCCTTCATGAG GTGCGGGACATGCCGGCAGCCGAAGCCATGGACCGATGGAGAGAAGGCTTGCCGAAGCTGTGGCTTCTCCATCGCCTGCT GCGGCTTCGGCGCGCGCATGCGGATATTTTCAACCACGGCGGTTACGAACCGGTGGAGATCGCGGGCGATGAAAACATGC ACGCCATCGCCTATGCGCGGGTTCTTGAGGGCCGGCGGGTGGTGGTCGCCGTACCACGCATCGTGCTTAGGCATTGCGAG CCCGGCCGCTCGTCCTGGATCAGCAGCGCCTTCGGACGCACAATGCTACAGCTTCCCGCCACTTCTTCGGGACATTACAG GACGTTGACCGGCCAGGCGCTGGACAAGCTTGAATTACCGCTCTCCATGCTCTGGGACGAGCTGCCGGTGGCGGTTCTTG AATCAACCTAG
Upstream 100 bases:
>100_bases ACTGGCGGCGGAAGCTTCCCGTCTTCATCGAGGAACTGGAGAGCGCTTCGATGCTGCGTGCCGTCATCGGCGCAATCCGG GAAGAAAGGCCGCGCGGTAC
Downstream 100 bases:
>100_bases ATCATTTCAGCGCTCACGAAGCCCCGAAATTTAAGGGTTTTATTGCGCCCGGAGGCGGCTAAGTTGCTTTCTTGGCGCGC TTGTTTGTTCCGCCGTTATT
Product: malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 856; Mature: 855
Protein sequence:
>856_residues MTIPCATYRLQFREGMTFERAAEIVPYLAELGVSHVYASPIFTAASGSTHGYDVADHQELDPVLGGVEGFALLAKALKEH GLGLLLDIVPNHMAVSTVNPWWRDVLKHGPESRFASHFDINWQAPKLLLPVLGEPYGEALREGKLVLRMDEETGEPVFGY YDLSLPLSPETLSLLLQDGDAGDAEALALTLQKANEDKDLLHRVHEAQSWRLAYWRLAREALTYRRFFEIADLIGVRVED PAVFADVHKLPLRLVKEGIVDGLRIDHIDGLADPKGYLAALRKASGLEYVLVEKILGPDEDLRPEWRCAGTTGYEVARLI TALQVEPSQREAMDKGWSRFTGNDAQFSSQVLAAKRRILTVNLAGELDGLVRLAEAIAIEDIATRDFGRDALRLAIVELA SAMPVYRTYIDKDGASEEDRALMEKAVSRVERGREVEDDRVIAFIASLLLDPTKGSKMRAEFITRFQQTTGPLMAKAVED TVFYRFNRLIALNEVGAEPDEFGLGPETFHDAMTKRAESWPHALSATATHDTKRGEDARARLAVISEMPQEWAAAVSRWH EAAEELRIELPRGAAPTPGTEWLLYQALAGAWPADLSLQDEEGLQELAERLVAFMTKALREAKRQTSWTDQNEPYETAVE NYVRGIFAPERRSFLREVRAIVAVIEPAGIVNSLAQLVMKLTLPGVPDIYQGCELLDYSMVDPDNRRPVDFELRRMLLHE VRDMPAAEAMDRWREGLPKLWLLHRLLRLRRAHADIFNHGGYEPVEIAGDENMHAIAYARVLEGRRVVVAVPRIVLRHCE PGRSSWISSAFGRTMLQLPATSSGHYRTLTGQALDKLELPLSMLWDELPVAVLEST
Sequences:
>Translated_856_residues MTIPCATYRLQFREGMTFERAAEIVPYLAELGVSHVYASPIFTAASGSTHGYDVADHQELDPVLGGVEGFALLAKALKEH GLGLLLDIVPNHMAVSTVNPWWRDVLKHGPESRFASHFDINWQAPKLLLPVLGEPYGEALREGKLVLRMDEETGEPVFGY YDLSLPLSPETLSLLLQDGDAGDAEALALTLQKANEDKDLLHRVHEAQSWRLAYWRLAREALTYRRFFEIADLIGVRVED PAVFADVHKLPLRLVKEGIVDGLRIDHIDGLADPKGYLAALRKASGLEYVLVEKILGPDEDLRPEWRCAGTTGYEVARLI TALQVEPSQREAMDKGWSRFTGNDAQFSSQVLAAKRRILTVNLAGELDGLVRLAEAIAIEDIATRDFGRDALRLAIVELA SAMPVYRTYIDKDGASEEDRALMEKAVSRVERGREVEDDRVIAFIASLLLDPTKGSKMRAEFITRFQQTTGPLMAKAVED TVFYRFNRLIALNEVGAEPDEFGLGPETFHDAMTKRAESWPHALSATATHDTKRGEDARARLAVISEMPQEWAAAVSRWH EAAEELRIELPRGAAPTPGTEWLLYQALAGAWPADLSLQDEEGLQELAERLVAFMTKALREAKRQTSWTDQNEPYETAVE NYVRGIFAPERRSFLREVRAIVAVIEPAGIVNSLAQLVMKLTLPGVPDIYQGCELLDYSMVDPDNRRPVDFELRRMLLHE VRDMPAAEAMDRWREGLPKLWLLHRLLRLRRAHADIFNHGGYEPVEIAGDENMHAIAYARVLEGRRVVVAVPRIVLRHCE PGRSSWISSAFGRTMLQLPATSSGHYRTLTGQALDKLELPLSMLWDELPVAVLEST >Mature_855_residues TIPCATYRLQFREGMTFERAAEIVPYLAELGVSHVYASPIFTAASGSTHGYDVADHQELDPVLGGVEGFALLAKALKEHG LGLLLDIVPNHMAVSTVNPWWRDVLKHGPESRFASHFDINWQAPKLLLPVLGEPYGEALREGKLVLRMDEETGEPVFGYY DLSLPLSPETLSLLLQDGDAGDAEALALTLQKANEDKDLLHRVHEAQSWRLAYWRLAREALTYRRFFEIADLIGVRVEDP AVFADVHKLPLRLVKEGIVDGLRIDHIDGLADPKGYLAALRKASGLEYVLVEKILGPDEDLRPEWRCAGTTGYEVARLIT ALQVEPSQREAMDKGWSRFTGNDAQFSSQVLAAKRRILTVNLAGELDGLVRLAEAIAIEDIATRDFGRDALRLAIVELAS AMPVYRTYIDKDGASEEDRALMEKAVSRVERGREVEDDRVIAFIASLLLDPTKGSKMRAEFITRFQQTTGPLMAKAVEDT VFYRFNRLIALNEVGAEPDEFGLGPETFHDAMTKRAESWPHALSATATHDTKRGEDARARLAVISEMPQEWAAAVSRWHE AAEELRIELPRGAAPTPGTEWLLYQALAGAWPADLSLQDEEGLQELAERLVAFMTKALREAKRQTSWTDQNEPYETAVEN YVRGIFAPERRSFLREVRAIVAVIEPAGIVNSLAQLVMKLTLPGVPDIYQGCELLDYSMVDPDNRRPVDFELRRMLLHEV RDMPAAEAMDRWREGLPKLWLLHRLLRLRRAHADIFNHGGYEPVEIAGDENMHAIAYARVLEGRRVVVAVPRIVLRHCEP GRSSWISSAFGRTMLQLPATSSGHYRTLTGQALDKLELPLSMLWDELPVAVLEST
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 95826; Mature: 95694
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPCATYRLQFREGMTFERAAEIVPYLAELGVSHVYASPIFTAASGSTHGYDVADHQEL CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCEEECCCCCCCCCCCCCHHH DPVLGGVEGFALLAKALKEHGLGLLLDIVPNHMAVSTVNPWWRDVLKHGPESRFASHFDI HHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHCCCHHHCCCCCCC NWQAPKLLLPVLGEPYGEALREGKLVLRMDEETGEPVFGYYDLSLPLSPETLSLLLQDGD CCCCHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHEECCC AGDAEALALTLQKANEDKDLLHRVHEAQSWRLAYWRLAREALTYRRFFEIADLIGVRVED CCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAVFADVHKLPLRLVKEGIVDGLRIDHIDGLADPKGYLAALRKASGLEYVLVEKILGPDE CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC DLRPEWRCAGTTGYEVARLITALQVEPSQREAMDKGWSRFTGNDAQFSSQVLAAKRRILT CCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEEE VNLAGELDGLVRLAEAIAIEDIATRDFGRDALRLAIVELASAMPVYRTYIDKDGASEEDR EEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHH ALMEKAVSRVERGREVEDDRVIAFIASLLLDPTKGSKMRAEFITRFQQTTGPLMAKAVED HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH TVFYRFNRLIALNEVGAEPDEFGLGPETFHDAMTKRAESWPHALSATATHDTKRGEDARA HHHHHHHHHEEEHHCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHH RLAVISEMPQEWAAAVSRWHEAAEELRIELPRGAAPTPGTEWLLYQALAGAWPADLSLQD HHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC EEGLQELAERLVAFMTKALREAKRQTSWTDQNEPYETAVENYVRGIFAPERRSFLREVRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH IVAVIEPAGIVNSLAQLVMKLTLPGVPDIYQGCELLDYSMVDPDNRRPVDFELRRMLLHE HHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VRDMPAAEAMDRWREGLPKLWLLHRLLRLRRAHADIFNHGGYEPVEIAGDENMHAIAYAR HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHH VLEGRRVVVAVPRIVLRHCEPGRSSWISSAFGRTMLQLPATSSGHYRTLTGQALDKLELP HHCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHHHHCCC LSMLWDELPVAVLEST HHHHHHHCCHHHHCCC >Mature Secondary Structure TIPCATYRLQFREGMTFERAAEIVPYLAELGVSHVYASPIFTAASGSTHGYDVADHQEL CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCEEECCCCCCCCCCCCCHHH DPVLGGVEGFALLAKALKEHGLGLLLDIVPNHMAVSTVNPWWRDVLKHGPESRFASHFDI HHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHCCCHHHCCCCCCC NWQAPKLLLPVLGEPYGEALREGKLVLRMDEETGEPVFGYYDLSLPLSPETLSLLLQDGD CCCCHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHEECCC AGDAEALALTLQKANEDKDLLHRVHEAQSWRLAYWRLAREALTYRRFFEIADLIGVRVED CCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PAVFADVHKLPLRLVKEGIVDGLRIDHIDGLADPKGYLAALRKASGLEYVLVEKILGPDE CHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCC DLRPEWRCAGTTGYEVARLITALQVEPSQREAMDKGWSRFTGNDAQFSSQVLAAKRRILT CCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHEEE VNLAGELDGLVRLAEAIAIEDIATRDFGRDALRLAIVELASAMPVYRTYIDKDGASEEDR EEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHH ALMEKAVSRVERGREVEDDRVIAFIASLLLDPTKGSKMRAEFITRFQQTTGPLMAKAVED HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH TVFYRFNRLIALNEVGAEPDEFGLGPETFHDAMTKRAESWPHALSATATHDTKRGEDARA HHHHHHHHHEEEHHCCCCCHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHH RLAVISEMPQEWAAAVSRWHEAAEELRIELPRGAAPTPGTEWLLYQALAGAWPADLSLQD HHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC EEGLQELAERLVAFMTKALREAKRQTSWTDQNEPYETAVENYVRGIFAPERRSFLREVRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH IVAVIEPAGIVNSLAQLVMKLTLPGVPDIYQGCELLDYSMVDPDNRRPVDFELRRMLLHE HHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VRDMPAAEAMDRWREGLPKLWLLHRLLRLRRAHADIFNHGGYEPVEIAGDENMHAIAYAR HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHH VLEGRRVVVAVPRIVLRHCEPGRSSWISSAFGRTMLQLPATSSGHYRTLTGQALDKLELP HHCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCEEEECHHHHHHHCCC LSMLWDELPVAVLEST HHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]