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The map label for this gene is exoY [H]

Identifier: 110634930

GI number: 110634930

Start: 2789604

End: 2790281

Strand: Reverse

Name: exoY [H]

Synonym: Meso_2589

Alternate gene names: 110634930

Gene position: 2790281-2789604 (Counterclockwise)

Preceding gene: 110634931

Following gene: 110634929

Centisome position: 63.24

GC content: 55.01

Gene sequence:

>678_bases
ATGCTTTCTGCGCTGGAAGGCGCGGTTCGTGACTCAGTTCGCTCACGTAACCGGCAAAGACGAAGTATTATAGACATTAT
AAAGAAAGTCTTTGATTTCGTATTCTCAATTTGTGCGCTTCTGTTTCTTTTTCCTGTGATAGCTGTCATATGCATTCTTC
TTTTCATTCAGGATGGATCGCCGCTTATCTATAGCCATAAGCGGATTGGCAGATATGGCCGGGAATTCGATTGCCTAAAG
TTTCGCACCATGCGCCGAGATGCCGACCGGAGCCTGCAGGAATTTCTCTGCGCTAACGAGGCCGCGCGCCGCGAATGGGA
GATGAACCGCAAGCTGCGAGACGATCCGCGGGTGCACTCCATGGGCCGTTTCCTCCGAATGACCAGCCTCGACGAAATTC
CGCAGTTCGTGAATGTGCTCAGGGGCGAGATGAGCATTGTCGGCCCTCGCCCGGTCGTGGAGGAAGAGCTCGCGCGCTAT
GGCGAGCGTGCGCACTGCTATTTGATGCTGACGCCGGGGATCACCGGCCTGTGGCAAGTATCGGGCCGCAACGATACGTC
TTATGACGATCGCGTCGAACTGGACGCCCGCTATTATGCGACACGCTCCCTGGCGCTGGATTTCAAAATCATCTGGCGAA
CCGTCGGCGTGCTTCTGTTCGATCGGAACGGCTGCTGA

Upstream 100 bases:

>100_bases
GCAATACCCCAATAGAATTATAGGCGCGCAAACAGGCCCGAGATAATATTTTTGCTAGAAGCTGACGTATGGTCGGCGGG
GAAAATATTGGGGATCAACT

Downstream 100 bases:

>100_bases
TCGCGTTATCGGAGCCAAGCGATGAGAATGACGATCCAGATGGCGAGGCAGAACAAGATGACGAGCCACCAGGCGATGGC
CCTGACGCTGAAGGATTTAA

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLSALEGAVRDSVRSRNRQRRSIIDIIKKVFDFVFSICALLFLFPVIAVICILLFIQDGSPLIYSHKRIGRYGREFDCLK
FRTMRRDADRSLQEFLCANEAARREWEMNRKLRDDPRVHSMGRFLRMTSLDEIPQFVNVLRGEMSIVGPRPVVEEELARY
GERAHCYLMLTPGITGLWQVSGRNDTSYDDRVELDARYYATRSLALDFKIIWRTVGVLLFDRNGC

Sequences:

>Translated_225_residues
MLSALEGAVRDSVRSRNRQRRSIIDIIKKVFDFVFSICALLFLFPVIAVICILLFIQDGSPLIYSHKRIGRYGREFDCLK
FRTMRRDADRSLQEFLCANEAARREWEMNRKLRDDPRVHSMGRFLRMTSLDEIPQFVNVLRGEMSIVGPRPVVEEELARY
GERAHCYLMLTPGITGLWQVSGRNDTSYDDRVELDARYYATRSLALDFKIIWRTVGVLLFDRNGC
>Mature_225_residues
MLSALEGAVRDSVRSRNRQRRSIIDIIKKVFDFVFSICALLFLFPVIAVICILLFIQDGSPLIYSHKRIGRYGREFDCLK
FRTMRRDADRSLQEFLCANEAARREWEMNRKLRDDPRVHSMGRFLRMTSLDEIPQFVNVLRGEMSIVGPRPVVEEELARY
GERAHCYLMLTPGITGLWQVSGRNDTSYDDRVELDARYYATRSLALDFKIIWRTVGVLLFDRNGC

Specific function: Needed for the addition of the first sugar (galactose) to the isoprenoid carrier. May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=198, Percent_Identity=33.8383838383838, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 26266; Mature: 26266

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSALEGAVRDSVRSRNRQRRSIIDIIKKVFDFVFSICALLFLFPVIAVICILLFIQDGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLIYSHKRIGRYGREFDCLKFRTMRRDADRSLQEFLCANEAARREWEMNRKLRDDPRVHS
CEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MGRFLRMTSLDEIPQFVNVLRGEMSIVGPRPVVEEELARYGERAHCYLMLTPGITGLWQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEE
SGRNDTSYDDRVELDARYYATRSLALDFKIIWRTVGVLLFDRNGC
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSALEGAVRDSVRSRNRQRRSIIDIIKKVFDFVFSICALLFLFPVIAVICILLFIQDGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLIYSHKRIGRYGREFDCLKFRTMRRDADRSLQEFLCANEAARREWEMNRKLRDDPRVHS
CEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MGRFLRMTSLDEIPQFVNVLRGEMSIVGPRPVVEEELARYGERAHCYLMLTPGITGLWQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEE
SGRNDTSYDDRVELDARYYATRSLALDFKIIWRTVGVLLFDRNGC
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2152899 [H]