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The map label for this gene is pcaC [H]

Identifier: 110634868

GI number: 110634868

Start: 2707062

End: 2707460

Strand: Direct

Name: pcaC [H]

Synonym: Meso_2527

Alternate gene names: 110634868

Gene position: 2707062-2707460 (Clockwise)

Preceding gene: 110634867

Following gene: 110634869

Centisome position: 61.35

GC content: 65.91

Gene sequence:

>399_bases
ATGGACAGGGAATTGCGTGAGGCCGGCGAGGCGATCCGCCGCAAGGTCCTGGGCGACGAATATGTCGACCGCGCCATGGG
GCAGGCCGATGCCTTTTCTGCTCCGTTCCAGGATGTCGTAAACGAATACTGTTGGGGACTCGCCTGGACCGATACCGCGC
TGGCGCCCGCTCAGCGCAGTCTGCTGAACCTCGGCATGCTGGCGGCGCTCGGCCGGATGCACGAGTTCCGGACGCATTTT
CGCGGTGCCCTGCGCAACGGGCTCAGCCATGACGAGCTGCGCGCGGCGCTGATCCAGATCACGGTCTATTGCGGCATACC
TGCCGGGGTCGAGGTGTTCCGGATCGCGCGCGAGGTGCTCTCCGAAACCAGCGAGGCGGGCGGTGAGGGCGTGGAATGA

Upstream 100 bases:

>100_bases
CTTCGCATCCTGCCGGGCCTGCGGCACTCCATCCTGATCGAGGCGCCCGAGATGGTATCCGGACTTATGCGCGAATTCTT
GGAAAAGGAGGGCATTACAG

Downstream 100 bases:

>100_bases
TCGTCGAGGAACGTATCTACCGCATCTGCTCAGGCAAGATGAAAGATTATCTTGCGCTGGTTCGCGATGAAGGTTTGGCC
ATCCAGAAGCCGATCCTCGG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDRELREAGEAIRRKVLGDEYVDRAMGQADAFSAPFQDVVNEYCWGLAWTDTALAPAQRSLLNLGMLAALGRMHEFRTHF
RGALRNGLSHDELRAALIQITVYCGIPAGVEVFRIAREVLSETSEAGGEGVE

Sequences:

>Translated_132_residues
MDRELREAGEAIRRKVLGDEYVDRAMGQADAFSAPFQDVVNEYCWGLAWTDTALAPAQRSLLNLGMLAALGRMHEFRTHF
RGALRNGLSHDELRAALIQITVYCGIPAGVEVFRIAREVLSETSEAGGEGVE
>Mature_132_residues
MDRELREAGEAIRRKVLGDEYVDRAMGQADAFSAPFQDVVNEYCWGLAWTDTALAPAQRSLLNLGMLAALGRMHEFRTHF
RGALRNGLSHDELRAALIQITVYCGIPAGVEVFRIAREVLSETSEAGGEGVE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14552; Mature: 14552

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRELREAGEAIRRKVLGDEYVDRAMGQADAFSAPFQDVVNEYCWGLAWTDTALAPAQRS
CCHHHHHHHHHHHHHHHCHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LLNLGMLAALGRMHEFRTHFRGALRNGLSHDELRAALIQITVYCGIPAGVEVFRIAREVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SETSEAGGEGVE
HHHHHCCCCCCC
>Mature Secondary Structure
MDRELREAGEAIRRKVLGDEYVDRAMGQADAFSAPFQDVVNEYCWGLAWTDTALAPAQRS
CCHHHHHHHHHHHHHHHCHHHHHHHHCCHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
LLNLGMLAALGRMHEFRTHFRGALRNGLSHDELRAALIQITVYCGIPAGVEVFRIAREVL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SETSEAGGEGVE
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]