| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is catD [H]
Identifier: 110634867
GI number: 110634867
Start: 2706254
End: 2707081
Strand: Direct
Name: catD [H]
Synonym: Meso_2526
Alternate gene names: 110634867
Gene position: 2706254-2707081 (Clockwise)
Preceding gene: 110634866
Following gene: 110634868
Centisome position: 61.33
GC content: 63.89
Gene sequence:
>828_bases ATGACCACGCGCAGCGGACGGCACAGGGTCGGCCCCGTCGAGCTGAACTATCGCATCGACGGCGTAGGCTCCGAGCCGCT GGTCTGCATCCACGGGGTGGGCTCCTACCTCGAGGCGTGGTCTGGTGTGGTCGAGCAGCTGGCGGACCGGTTCACCGTTG CGACCTTCGATCTGCGGGGCCACGGACGCTCGACCCGGATCAAAGGCCGCTACGAAATCGACGATTTCGTGCGCGAGACA CTGGCAATCGCCGAACTGGCGGGATTCGATCGCTTTCACCTGGCAGGGTTCTCTCTGGGCGGGTTGATCGCCCAGAGACT TGCGCTGACCCATCCAGAAAGACTGCGCCGGCTGGTCCTGCTTTCGACAGTGGCGGGGCGTTCCGCCGAAGAGCAGCAGC GCGTCCGCGCCCGTTTGGCCGCGCTTCAGACTGGCGACCGGGGGTCGCATTACGACAGCTCGCTCTCGCGTTGGCTGACC GAGGAGTTCCAGGCCGCCAATCCCGAATTGATCCGCCGGATGCGCGAACGCAATGCCGAGAATGATCCCGATTGCTACGC CGCTGCTTACCGGGTGCTGGCAGAAACGGACTTCGGCGGGTTTCTCGATCAAATCCGGGTGCCGACGCTGATTGCCACCG GCGAAGACGATATGGGCTCGAACCCGCGCATGGCGCGCTTCATGCACGACCGCATCCCGGGATCGGAGCTTCGCATCCTG CCGGGCCTGCGGCACTCCATCCTGATCGAGGCGCCCGAGATGGTATCCGGACTTATGCGCGAATTCTTGGAAAAGGAGGG CATTACAGATGGACAGGGAATTGCGTGA
Upstream 100 bases:
>100_bases AAAGGACACTGCAGCTCTTCATTGACGAGATCATGCCGGTTTTTGCTGACCGCGAGCGTGAGGCCGCGCGTCAGTCACCC GCTGTTGCGGGGAGCATGGC
Downstream 100 bases:
>100_bases GGCCGGCGAGGCGATCCGCCGCAAGGTCCTGGGCGACGAATATGTCGACCGCGCCATGGGGCAGGCCGATGCCTTTTCTG CTCCGTTCCAGGATGTCGTA
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTTRSGRHRVGPVELNYRIDGVGSEPLVCIHGVGSYLEAWSGVVEQLADRFTVATFDLRGHGRSTRIKGRYEIDDFVRET LAIAELAGFDRFHLAGFSLGGLIAQRLALTHPERLRRLVLLSTVAGRSAEEQQRVRARLAALQTGDRGSHYDSSLSRWLT EEFQAANPELIRRMRERNAENDPDCYAAAYRVLAETDFGGFLDQIRVPTLIATGEDDMGSNPRMARFMHDRIPGSELRIL PGLRHSILIEAPEMVSGLMREFLEKEGITDGQGIA
Sequences:
>Translated_275_residues MTTRSGRHRVGPVELNYRIDGVGSEPLVCIHGVGSYLEAWSGVVEQLADRFTVATFDLRGHGRSTRIKGRYEIDDFVRET LAIAELAGFDRFHLAGFSLGGLIAQRLALTHPERLRRLVLLSTVAGRSAEEQQRVRARLAALQTGDRGSHYDSSLSRWLT EEFQAANPELIRRMRERNAENDPDCYAAAYRVLAETDFGGFLDQIRVPTLIATGEDDMGSNPRMARFMHDRIPGSELRIL PGLRHSILIEAPEMVSGLMREFLEKEGITDGQGIA >Mature_274_residues TTRSGRHRVGPVELNYRIDGVGSEPLVCIHGVGSYLEAWSGVVEQLADRFTVATFDLRGHGRSTRIKGRYEIDDFVRETL AIAELAGFDRFHLAGFSLGGLIAQRLALTHPERLRRLVLLSTVAGRSAEEQQRVRARLAALQTGDRGSHYDSSLSRWLTE EFQAANPELIRRMRERNAENDPDCYAAAYRVLAETDFGGFLDQIRVPTLIATGEDDMGSNPRMARFMHDRIPGSELRILP GLRHSILIEAPEMVSGLMREFLEKEGITDGQGIA
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789817, Length=252, Percent_Identity=28.968253968254, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 30704; Mature: 30573
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRSGRHRVGPVELNYRIDGVGSEPLVCIHGVGSYLEAWSGVVEQLADRFTVATFDLRG CCCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEECC HGRSTRIKGRYEIDDFVRETLAIAELAGFDRFHLAGFSLGGLIAQRLALTHPERLRRLVL CCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LSTVAGRSAEEQQRVRARLAALQTGDRGSHYDSSLSRWLTEEFQAANPELIRRMRERNAE HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC NDPDCYAAAYRVLAETDFGGFLDQIRVPTLIATGEDDMGSNPRMARFMHDRIPGSELRIL CCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEC PGLRHSILIEAPEMVSGLMREFLEKEGITDGQGIA CCCCHHHEEECHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTRSGRHRVGPVELNYRIDGVGSEPLVCIHGVGSYLEAWSGVVEQLADRFTVATFDLRG CCCCCCCCCCCEEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHEEEEEEECC HGRSTRIKGRYEIDDFVRETLAIAELAGFDRFHLAGFSLGGLIAQRLALTHPERLRRLVL CCCCCEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LSTVAGRSAEEQQRVRARLAALQTGDRGSHYDSSLSRWLTEEFQAANPELIRRMRERNAE HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC NDPDCYAAAYRVLAETDFGGFLDQIRVPTLIATGEDDMGSNPRMARFMHDRIPGSELRIL CCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEC PGLRHSILIEAPEMVSGLMREFLEKEGITDGQGIA CCCCHHHEEECHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]