| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yhbW [C]
Identifier: 110634866
GI number: 110634866
Start: 2705166
End: 2706257
Strand: Direct
Name: yhbW [C]
Synonym: Meso_2525
Alternate gene names: 110634866
Gene position: 2705166-2706257 (Clockwise)
Preceding gene: 110634865
Following gene: 110634867
Centisome position: 61.31
GC content: 62.09
Gene sequence:
>1092_bases ATGAGGTTCGCCGTATCTCTGACCATGGAGCGATTCACTCCGGACAGGCCGATGAGCGAGGTGAAGGAGAACCTGCTTCA TCTGGCCAAGATGGCCGACGAGGGCGGTTTCGAGACGATCTGGACCGCCGAACATCACACGATCGAATGCACCATCTCGC CGAACCCGTTCCAGACGCTGACCTGGCTCGGCCAGCACACCGATCGCATCCGGCTGGGCACCTCGACGCTCGTCGCGCCC TACTGGAGCCCTATCCGGCTGGCCGGGGAATCCGCGCTCTGCGACCATCTGACCGGCGGCCGGCTCGAATTCGGCATTGC CCGCGGCTCATACCAGTACGAGTTCGACCGCATGGCTGGCGGCATACCCCAGCAGGAGGGCGTGGCCTATCTCAAGGAGC TGCTTCCGGCGGTCAAAGCCTTGTGGAAAGGCGACTATGCCCATGACGGGCATTACTGGAAATTCCCGATTGCGGCGGCA GTGCCCAAGCCGCTGCAGCAGCCGCACCCACCGGTTTGGGTGGCGGCGCGCGATCCGGGCACCTTCGACTGGGCGGTTGC CAATGGCGCCAACCTGATGACGACGCCACTCTCGGCCCCGGCCGCCGAGATCGCTGTGCTGGGCGAGAAGTTCCGCAAGG CGGTCGCCGATCACCCCGAGGTGCCCAAGCCGCGCCTGATGATGCAGCGCCGGACCTGCGTTTACGATCGCTCACAGGAC TGGGAAGTGGCGGTCCAGCATTCCATCGATTATGGGCGCCATTTCGAGAACCTCATGCAGAATATCGGCGGTGTCACCAA CGGTTTTCCAGAGCCGGTGCCCCTCGATAAAGTGAAGGGCAAGGAAAACTACAGTCCCGAGAACATCCGCAAAAACCTGA TGTTCGGCACCCCAGACGAGGCCATCGAGAAATTGCTCGATTACGAGGCTGCGGGCGTCGACCAGTACTGTTTGGGCCTG ACCTTCAATCTGCCCTTCGAGATGCAGAAAAGGACACTGCAGCTCTTCATTGACGAGATCATGCCGGTTTTTGCTGACCG CGAGCGTGAGGCCGCGCGTCAGTCACCCGCTGTTGCGGGGAGCATGGCATGA
Upstream 100 bases:
>100_bases ATTCTCGCGCTCCAAGAACGTGCTGATCGACTATTCGGGCGCCATGCAAGATCCCTTTGTCATCCGCCTGAAGTGATCAA AGAAAAACAGGAGTATCGAG
Downstream 100 bases:
>100_bases CCACGCGCAGCGGACGGCACAGGGTCGGCCCCGTCGAGCTGAACTATCGCATCGACGGCGTAGGCTCCGAGCCGCTGGTC TGCATCCACGGGGTGGGCTC
Product: luciferase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA
Sequences:
>Translated_363_residues MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA >Mature_363_residues MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 40739; Mature: 40739
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTL CEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHHH TWLGQHTDRIRLGTSTLVAPYWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAG HHHHCCCCEEEECCCEEECCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCEEEHHHHHC GIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAAVPKPLQQPHPPVWVAARDPG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCHHCCCCCCEEEEECCCC TFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDE CEEHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHH AIEKLLDYEAAGVDQYCLGLTFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAG HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC SMA CCC >Mature Secondary Structure MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTL CEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHHH TWLGQHTDRIRLGTSTLVAPYWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAG HHHHCCCCEEEECCCEEECCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCEEEHHHHHC GIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAAVPKPLQQPHPPVWVAARDPG CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCHHCCCCCCEEEEECCCC TFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDE CEEHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHH AIEKLLDYEAAGVDQYCLGLTFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAG HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC SMA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424; 8796346 [H]