Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is yhbW [C]

Identifier: 110634866

GI number: 110634866

Start: 2705166

End: 2706257

Strand: Direct

Name: yhbW [C]

Synonym: Meso_2525

Alternate gene names: 110634866

Gene position: 2705166-2706257 (Clockwise)

Preceding gene: 110634865

Following gene: 110634867

Centisome position: 61.31

GC content: 62.09

Gene sequence:

>1092_bases
ATGAGGTTCGCCGTATCTCTGACCATGGAGCGATTCACTCCGGACAGGCCGATGAGCGAGGTGAAGGAGAACCTGCTTCA
TCTGGCCAAGATGGCCGACGAGGGCGGTTTCGAGACGATCTGGACCGCCGAACATCACACGATCGAATGCACCATCTCGC
CGAACCCGTTCCAGACGCTGACCTGGCTCGGCCAGCACACCGATCGCATCCGGCTGGGCACCTCGACGCTCGTCGCGCCC
TACTGGAGCCCTATCCGGCTGGCCGGGGAATCCGCGCTCTGCGACCATCTGACCGGCGGCCGGCTCGAATTCGGCATTGC
CCGCGGCTCATACCAGTACGAGTTCGACCGCATGGCTGGCGGCATACCCCAGCAGGAGGGCGTGGCCTATCTCAAGGAGC
TGCTTCCGGCGGTCAAAGCCTTGTGGAAAGGCGACTATGCCCATGACGGGCATTACTGGAAATTCCCGATTGCGGCGGCA
GTGCCCAAGCCGCTGCAGCAGCCGCACCCACCGGTTTGGGTGGCGGCGCGCGATCCGGGCACCTTCGACTGGGCGGTTGC
CAATGGCGCCAACCTGATGACGACGCCACTCTCGGCCCCGGCCGCCGAGATCGCTGTGCTGGGCGAGAAGTTCCGCAAGG
CGGTCGCCGATCACCCCGAGGTGCCCAAGCCGCGCCTGATGATGCAGCGCCGGACCTGCGTTTACGATCGCTCACAGGAC
TGGGAAGTGGCGGTCCAGCATTCCATCGATTATGGGCGCCATTTCGAGAACCTCATGCAGAATATCGGCGGTGTCACCAA
CGGTTTTCCAGAGCCGGTGCCCCTCGATAAAGTGAAGGGCAAGGAAAACTACAGTCCCGAGAACATCCGCAAAAACCTGA
TGTTCGGCACCCCAGACGAGGCCATCGAGAAATTGCTCGATTACGAGGCTGCGGGCGTCGACCAGTACTGTTTGGGCCTG
ACCTTCAATCTGCCCTTCGAGATGCAGAAAAGGACACTGCAGCTCTTCATTGACGAGATCATGCCGGTTTTTGCTGACCG
CGAGCGTGAGGCCGCGCGTCAGTCACCCGCTGTTGCGGGGAGCATGGCATGA

Upstream 100 bases:

>100_bases
ATTCTCGCGCTCCAAGAACGTGCTGATCGACTATTCGGGCGCCATGCAAGATCCCTTTGTCATCCGCCTGAAGTGATCAA
AGAAAAACAGGAGTATCGAG

Downstream 100 bases:

>100_bases
CCACGCGCAGCGGACGGCACAGGGTCGGCCCCGTCGAGCTGAACTATCGCATCGACGGCGTAGGCTCCGAGCCGCTGGTC
TGCATCCACGGGGTGGGCTC

Product: luciferase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP
YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA
VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD
WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL
TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA

Sequences:

>Translated_363_residues
MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP
YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA
VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD
WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL
TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA
>Mature_363_residues
MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTLTWLGQHTDRIRLGTSTLVAP
YWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAGGIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAA
VPKPLQQPHPPVWVAARDPGTFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD
WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDEAIEKLLDYEAAGVDQYCLGL
TFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAGSMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 40739; Mature: 40739

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHHH
TWLGQHTDRIRLGTSTLVAPYWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAG
HHHHCCCCEEEECCCEEECCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCEEEHHHHHC
GIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAAVPKPLQQPHPPVWVAARDPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCHHCCCCCCEEEEECCCC
TFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD
CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDE
CEEHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHH
AIEKLLDYEAAGVDQYCLGLTFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
SMA
CCC
>Mature Secondary Structure
MRFAVSLTMERFTPDRPMSEVKENLLHLAKMADEGGFETIWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCHHH
TWLGQHTDRIRLGTSTLVAPYWSPIRLAGESALCDHLTGGRLEFGIARGSYQYEFDRMAG
HHHHCCCCEEEECCCEEECCCCCCCEECCCHHHHHHCCCCCEEEEEECCCCEEEHHHHHC
GIPQQEGVAYLKELLPAVKALWKGDYAHDGHYWKFPIAAAVPKPLQQPHPPVWVAARDPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHCCCHHCCCCCCEEEEECCCC
TFDWAVANGANLMTTPLSAPAAEIAVLGEKFRKAVADHPEVPKPRLMMQRRTCVYDRSQD
CEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
WEVAVQHSIDYGRHFENLMQNIGGVTNGFPEPVPLDKVKGKENYSPENIRKNLMFGTPDE
CEEHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHH
AIEKLLDYEAAGVDQYCLGLTFNLPFEMQKRTLQLFIDEIMPVFADREREAARQSPAVAG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
SMA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]