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The map label for this gene is 110634863

Identifier: 110634863

GI number: 110634863

Start: 2700632

End: 2702482

Strand: Direct

Name: 110634863

Synonym: Meso_2522

Alternate gene names: NA

Gene position: 2700632-2702482 (Clockwise)

Preceding gene: 110634855

Following gene: 110634864

Centisome position: 61.2

GC content: 62.94

Gene sequence:

>1851_bases
ATGGACCATAGTTGCGCGTCAAACGGCCCAACCGTACCCGGACAGAAGGATTCTAGCGCCATCGATTGGAAGGCCAAACT
TTCGTCCCTTACCCAGGCCGTGGTGCAGATCAACGGCACCGGCAGCCTCGAATCGGTTCTCGTCAACCTGGTGACGACCG
CGTGCAAGCAGGTCGGCTGGGCGATGGGCTCGATCATGTCGATCAGCGCCGAACACGGCTTTGCATATGTCATGGCGCGC
CACGATCCGAACCTGCTGCAGCGCGAGCTGCGCGACCGATGGGAGCTGGCAACCAGCCCTTCTTTGATGGCTCTCCAGCG
CAACCAGCAGATCTATATCCGCGATGCGCGCGAATCCGCCGAGTTCCCCGCTTACCGGATTGAAGCTTTCGAGCGTGATT
ACCGTTCGGTACTGGTCGTGCCGATGAACTGCGCTGATTTCGAAGGCCGCCCGATGGTGCTGAGCCTGTTGTCGCGCCAG
ATCTCGGAGATTTCGGAGGACGATCAGGCGATCCTGGACATGGTGGTCCAGCTCGGGGTAGCTGCGGTCGAGCAGGAGCG
ACGCGTCCAAGCCGCCAGGCAGGAGGCCGCCCGGCAGGAAAAGGCGCTGAGCGCACACAAGTCGCTGCTGGACCACGCGC
TGGCGGACAATTCGGTCCCTTTGCTCTGCAAGTTGCTTGAGAATCTGCTCCAGACGCCGGTGGTGGTGGTGGATTTCACG
GTGTCGCAGGTGGTGGGCGGGCGAACGCCCGACCCCGCGCGCTTCGACGATGAGACCTGGCAGGCTGAGGTTCGGCGGGT
CTATGGCGCACAGATCGCCAAGATAGCGCGCGAGGCCGCCGAGCGCGCGACGCAGGCCCAGACCATGATCGCGCTCCACA
ACGGGGCGGATACGCTCCAGCTTGCAGCACGGATCCAACCGCTGGTGGTCGATGCAGACAAGGTCGGGGCAATGGTCATC
TTCACGCAGGTAAGCGAGCCCGACATCCTGGAATTGATGATCCTCGACAGCGCACGCTTTGCGCTCAGCGTCGTGATGAT
GCGGAATTTCATTCGCTTCCGGTTCGAGAAGCGAAGCCAGGCGGAGCTGTTCTTCGAGGTGATCGAGCGGCGCTGGCGCG
ACAAGGCGGATCTGCTGATGCGCGCGCAGCGCCAGGGGCTGGATTTCTCGCGCCGGCAGCAGATGCTGATCGTCGATTTC
GAGAGCAGCGGGCACGAGTTCAGCAGCATGGCCATCAATCTTCACCGCGCCCTGTCGCAAGCCGTCCAGGCGCCGGCGAA
GGGGATCTCGGTGCTGGCGGTCGACGGCGCAATGATCTGCCTCTGCCCGGTTGGGCCAGAAAATTCCCAGGCTGAGATGC
ATAAGCTCGCGCAGCGCGCTGCTCGCGAACTGAGCGCCTATCTCGACAAGCCTCCCGTCGTGGTGCTGAGCGCCGTCTGC
GCCGACTTGCCCGATTATGCCGAAGCCTGGGAGCGCAGCCGCAGGGTCGTGGCAATCGCGCGGTCCATGGGGAAATTCGG
GGCACTCTCGATGCAGGATTTCGGCCCTATGCCGATGCTGGCTGCAGCGGCGGGCGTGGACGAGGTGCGGCTCTTTCTCG
ACGACGTGCTTGGGCAGATTATCGGATACGACCGAGAGAAGGGAACGCCTTACCTCGAAACGCTCGAGATCTTTTTGCGC
GAGCAGGGACGCAGCCAGGCCACTGCCGACGCCATGGGGCTGCATGTGACGACGCTGCGCTACCGCCTCAAGCGCATAGA
AGAGCTCTTTGGGATCAATGTCGAAGCGCCCGAGCGGCGCTTCGCGGTCGATCTGGCCATCCGCCTGTACAAGATGATCG
CGCCTGAATAA

Upstream 100 bases:

>100_bases
CACACACTATAGGGGGCGGATGACAGCAGACTCTTCCTGCGGTATGAGGGAAATGATCTGATTAGTCTCCTGCGAAACGA
AGTATGAATTCCCGGTCCGG

Downstream 100 bases:

>100_bases
GCCCTCCAGCGCTGGCCGGCCGACAGCGCATACGACTTCCTACGAAACACAGCAAAGAATTCCATTCCCTTCCTGAGAAT
GTCAGGAAGAACGTGTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: PucR Family Transcriptional Regulator; Transcriptional Regulator; GAF Domain-Containing Protein; Phytochrome Sensor Protein; GAF Domain Protein; CdaR Family Transcriptional Regulator; Transcriptional Regulator PucR Family; GAF Sensor Protein; Transcriptional Regulator CdaR Family

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MDHSCASNGPTVPGQKDSSAIDWKAKLSSLTQAVVQINGTGSLESVLVNLVTTACKQVGWAMGSIMSISAEHGFAYVMAR
HDPNLLQRELRDRWELATSPSLMALQRNQQIYIRDARESAEFPAYRIEAFERDYRSVLVVPMNCADFEGRPMVLSLLSRQ
ISEISEDDQAILDMVVQLGVAAVEQERRVQAARQEAARQEKALSAHKSLLDHALADNSVPLLCKLLENLLQTPVVVVDFT
VSQVVGGRTPDPARFDDETWQAEVRRVYGAQIAKIAREAAERATQAQTMIALHNGADTLQLAARIQPLVVDADKVGAMVI
FTQVSEPDILELMILDSARFALSVVMMRNFIRFRFEKRSQAELFFEVIERRWRDKADLLMRAQRQGLDFSRRQQMLIVDF
ESSGHEFSSMAINLHRALSQAVQAPAKGISVLAVDGAMICLCPVGPENSQAEMHKLAQRAARELSAYLDKPPVVVLSAVC
ADLPDYAEAWERSRRVVAIARSMGKFGALSMQDFGPMPMLAAAAGVDEVRLFLDDVLGQIIGYDREKGTPYLETLEIFLR
EQGRSQATADAMGLHVTTLRYRLKRIEELFGINVEAPERRFAVDLAIRLYKMIAPE

Sequences:

>Translated_616_residues
MDHSCASNGPTVPGQKDSSAIDWKAKLSSLTQAVVQINGTGSLESVLVNLVTTACKQVGWAMGSIMSISAEHGFAYVMAR
HDPNLLQRELRDRWELATSPSLMALQRNQQIYIRDARESAEFPAYRIEAFERDYRSVLVVPMNCADFEGRPMVLSLLSRQ
ISEISEDDQAILDMVVQLGVAAVEQERRVQAARQEAARQEKALSAHKSLLDHALADNSVPLLCKLLENLLQTPVVVVDFT
VSQVVGGRTPDPARFDDETWQAEVRRVYGAQIAKIAREAAERATQAQTMIALHNGADTLQLAARIQPLVVDADKVGAMVI
FTQVSEPDILELMILDSARFALSVVMMRNFIRFRFEKRSQAELFFEVIERRWRDKADLLMRAQRQGLDFSRRQQMLIVDF
ESSGHEFSSMAINLHRALSQAVQAPAKGISVLAVDGAMICLCPVGPENSQAEMHKLAQRAARELSAYLDKPPVVVLSAVC
ADLPDYAEAWERSRRVVAIARSMGKFGALSMQDFGPMPMLAAAAGVDEVRLFLDDVLGQIIGYDREKGTPYLETLEIFLR
EQGRSQATADAMGLHVTTLRYRLKRIEELFGINVEAPERRFAVDLAIRLYKMIAPE
>Mature_616_residues
MDHSCASNGPTVPGQKDSSAIDWKAKLSSLTQAVVQINGTGSLESVLVNLVTTACKQVGWAMGSIMSISAEHGFAYVMAR
HDPNLLQRELRDRWELATSPSLMALQRNQQIYIRDARESAEFPAYRIEAFERDYRSVLVVPMNCADFEGRPMVLSLLSRQ
ISEISEDDQAILDMVVQLGVAAVEQERRVQAARQEAARQEKALSAHKSLLDHALADNSVPLLCKLLENLLQTPVVVVDFT
VSQVVGGRTPDPARFDDETWQAEVRRVYGAQIAKIAREAAERATQAQTMIALHNGADTLQLAARIQPLVVDADKVGAMVI
FTQVSEPDILELMILDSARFALSVVMMRNFIRFRFEKRSQAELFFEVIERRWRDKADLLMRAQRQGLDFSRRQQMLIVDF
ESSGHEFSSMAINLHRALSQAVQAPAKGISVLAVDGAMICLCPVGPENSQAEMHKLAQRAARELSAYLDKPPVVVLSAVC
ADLPDYAEAWERSRRVVAIARSMGKFGALSMQDFGPMPMLAAAAGVDEVRLFLDDVLGQIIGYDREKGTPYLETLEIFLR
EQGRSQATADAMGLHVTTLRYRLKRIEELFGINVEAPERRFAVDLAIRLYKMIAPE

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68616; Mature: 68616

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSCASNGPTVPGQKDSSAIDWKAKLSSLTQAVVQINGTGSLESVLVNLVTTACKQVGW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AMGSIMSISAEHGFAYVMARHDPNLLQRELRDRWELATSPSLMALQRNQQIYIRDARESA
HHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCEEEEEECCCCC
EFPAYRIEAFERDYRSVLVVPMNCADFEGRPMVLSLLSRQISEISEDDQAILDMVVQLGV
CCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAVEQERRVQAARQEAARQEKALSAHKSLLDHALADNSVPLLCKLLENLLQTPVVVVDFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEE
VSQVVGGRTPDPARFDDETWQAEVRRVYGAQIAKIAREAAERATQAQTMIALHNGADTLQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH
LAARIQPLVVDADKVGAMVIFTQVSEPDILELMILDSARFALSVVMMRNFIRFRFEKRSQ
HHHHCCCEEEEHHHCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHH
AELFFEVIERRWRDKADLLMRAQRQGLDFSRRQQMLIVDFESSGHEFSSMAINLHRALSQ
HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
AVQAPAKGISVLAVDGAMICLCPVGPENSQAEMHKLAQRAARELSAYLDKPPVVVLSAVC
HHHCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADLPDYAEAWERSRRVVAIARSMGKFGALSMQDFGPMPMLAAAAGVDEVRLFLDDVLGQI
HCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHCCHHHHHHHHHHHHHHH
IGYDREKGTPYLETLEIFLREQGRSQATADAMGLHVTTLRYRLKRIEELFGINVEAPERR
HCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FAVDLAIRLYKMIAPE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDHSCASNGPTVPGQKDSSAIDWKAKLSSLTQAVVQINGTGSLESVLVNLVTTACKQVGW
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AMGSIMSISAEHGFAYVMARHDPNLLQRELRDRWELATSPSLMALQRNQQIYIRDARESA
HHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCEEEEEECCCCC
EFPAYRIEAFERDYRSVLVVPMNCADFEGRPMVLSLLSRQISEISEDDQAILDMVVQLGV
CCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAVEQERRVQAARQEAARQEKALSAHKSLLDHALADNSVPLLCKLLENLLQTPVVVVDFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEE
VSQVVGGRTPDPARFDDETWQAEVRRVYGAQIAKIAREAAERATQAQTMIALHNGADTLQ
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHH
LAARIQPLVVDADKVGAMVIFTQVSEPDILELMILDSARFALSVVMMRNFIRFRFEKRSQ
HHHHCCCEEEEHHHCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCHH
AELFFEVIERRWRDKADLLMRAQRQGLDFSRRQQMLIVDFESSGHEFSSMAINLHRALSQ
HHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
AVQAPAKGISVLAVDGAMICLCPVGPENSQAEMHKLAQRAARELSAYLDKPPVVVLSAVC
HHHCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ADLPDYAEAWERSRRVVAIARSMGKFGALSMQDFGPMPMLAAAAGVDEVRLFLDDVLGQI
HCCCHHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCHHHHHHCCHHHHHHHHHHHHHHH
IGYDREKGTPYLETLEIFLREQGRSQATADAMGLHVTTLRYRLKRIEELFGINVEAPERR
HCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
FAVDLAIRLYKMIAPE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA