| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is pheB [H]
Identifier: 110634847
GI number: 110634847
Start: 2684640
End: 2685620
Strand: Reverse
Name: pheB [H]
Synonym: Meso_2506
Alternate gene names: 110634847
Gene position: 2685620-2684640 (Counterclockwise)
Preceding gene: 110634848
Following gene: 110634846
Centisome position: 60.86
GC content: 58.31
Gene sequence:
>981_bases ATGCCGATCTCGGCTCCGACCCTTTATCCGCCGTTCAACATTATCCGGCTCAGCCATGTCGAGTTTGGCGTTAAGGATCT CACCGCCTCGCGTGCCTTTTATGTCGATACGCTCGGCCTTCAGGTAACCGACGAAGACGATGAAGTGATTTACCTGCGCG CGCTGGAAGAGCGCGGCCATCACTGCATGGTTCTACGCAAATCCGCAGAAAGCCTCGTCAGGGCCTTGTCGTTCAAGGTC TTCGATGAGGAGCAACTTGATATCGCGCATTCATGGTTCCAAAAACGCGGCCATCCGGTCGCCTGGGTCGAACGGCCCTA CCAGGGACGCACGCTCGCGACCACGGACTGCTTCGGCGCGCCGATAGAGTTTTATTTCAAGATGGACCGGCTGGAGCCGA TCCACCAGAAATATGCGCTCTATCGTGGAGTGAGGCCGCTTCGGATCGACCACTTCAACTGCTTTTCGCCGGATGTGGAC AAGGCCGTCGAGTTCTATGGTGAGATAGGGTTCCGCGTCACCGAATATACGGAGGACGAGGAGAGCGGCAAGCTATGGGC CGCCTGGACCCACCGCAAGGGCGGTGTCCATGACCTGGCCTTTACCAATGGATTCGGCCCACGGCTGCACCATACCGCCT TTTGGGTTCCCACACCGCTCAACATCATAGACCTCTGCGATTTGATGGCGACGACCGGCTATGTCGCCAATATCGAGCGG GGACCGGGCCGCCACGGCATCTCCAATGCCTTTTTCCTTTATATCCTGGACCCCGACCGGCACCGGATCGAGATCTACTG CTCCGATTATCAAACGGTTGATCCCGACCTCGAGCCGATCAAATGGGACCTCAAGGACCCACAGCGTCAGACGCTTTGGG GCGCCCCGGCACCGAAATCCTGGTTCGAGCACGGCTCGCTCTTCGAGGGGGTCGAACCCGTTCATTCCCGTCTCGAAGCA AGCCCGATCATCGCACCTTAA
Upstream 100 bases:
>100_bases ATGTCAGCTTCCCGCGCAGGGAACACAAGGTCTCGAAACTCGGCGGCTGAAGCCCGCTTCCGAAGGCGCGCTGGCCAAAG TCTTTATAGGGAGAAGAATC
Downstream 100 bases:
>100_bases GGAAAGCTCATGCTCACCGACGCCAGCCTCGTGAAGCAAGCGGCCCTGATTGGGAACCGGTAAGTACCCGCCAGCGAGAG TGCGCTTTAGCGCCAGTAAG
Product: 3,4-dihydroxyphenylacetate 2,3-dioxygenase
Products: NA
Alternate protein names: MPC; CatO2ase; Catechol 2,3-dioxygenase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPISAPTLYPPFNIIRLSHVEFGVKDLTASRAFYVDTLGLQVTDEDDEVIYLRALEERGHHCMVLRKSAESLVRALSFKV FDEEQLDIAHSWFQKRGHPVAWVERPYQGRTLATTDCFGAPIEFYFKMDRLEPIHQKYALYRGVRPLRIDHFNCFSPDVD KAVEFYGEIGFRVTEYTEDEESGKLWAAWTHRKGGVHDLAFTNGFGPRLHHTAFWVPTPLNIIDLCDLMATTGYVANIER GPGRHGISNAFFLYILDPDRHRIEIYCSDYQTVDPDLEPIKWDLKDPQRQTLWGAPAPKSWFEHGSLFEGVEPVHSRLEA SPIIAP
Sequences:
>Translated_326_residues MPISAPTLYPPFNIIRLSHVEFGVKDLTASRAFYVDTLGLQVTDEDDEVIYLRALEERGHHCMVLRKSAESLVRALSFKV FDEEQLDIAHSWFQKRGHPVAWVERPYQGRTLATTDCFGAPIEFYFKMDRLEPIHQKYALYRGVRPLRIDHFNCFSPDVD KAVEFYGEIGFRVTEYTEDEESGKLWAAWTHRKGGVHDLAFTNGFGPRLHHTAFWVPTPLNIIDLCDLMATTGYVANIER GPGRHGISNAFFLYILDPDRHRIEIYCSDYQTVDPDLEPIKWDLKDPQRQTLWGAPAPKSWFEHGSLFEGVEPVHSRLEA SPIIAP >Mature_325_residues PISAPTLYPPFNIIRLSHVEFGVKDLTASRAFYVDTLGLQVTDEDDEVIYLRALEERGHHCMVLRKSAESLVRALSFKVF DEEQLDIAHSWFQKRGHPVAWVERPYQGRTLATTDCFGAPIEFYFKMDRLEPIHQKYALYRGVRPLRIDHFNCFSPDVDK AVEFYGEIGFRVTEYTEDEESGKLWAAWTHRKGGVHDLAFTNGFGPRLHHTAFWVPTPLNIIDLCDLMATTGYVANIERG PGRHGISNAFFLYILDPDRHRIEIYCSDYQTVDPDLEPIKWDLKDPQRQTLWGAPAPKSWFEHGSLFEGVEPVHSRLEAS PIIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017624 - InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 37493; Mature: 37362
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISAPTLYPPFNIIRLSHVEFGVKDLTASRAFYVDTLGLQVTDEDDEVIYLRALEERGH CCCCCCCCCCCHHEEEEECHHCCHHHHHCCCEEEEEEECEEEECCCCCEEEEEEHHHCCC HCMVLRKSAESLVRALSFKVFDEEQLDIAHSWFQKRGHPVAWVERPYQGRTLATTDCFGA EEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCC PIEFYFKMDRLEPIHQKYALYRGVRPLRIDHFNCFSPDVDKAVEFYGEIGFRVTEYTEDE CCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCC ESGKLWAAWTHRKGGVHDLAFTNGFGPRLHHTAFWVPTPLNIIDLCDLMATTGYVANIER CCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCC GPGRHGISNAFFLYILDPDRHRIEIYCSDYQTVDPDLEPIKWDLKDPQRQTLWGAPAPKS CCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHHCCCCCCCHH WFEHGSLFEGVEPVHSRLEASPIIAP HHHCCCHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure PISAPTLYPPFNIIRLSHVEFGVKDLTASRAFYVDTLGLQVTDEDDEVIYLRALEERGH CCCCCCCCCCHHEEEEECHHCCHHHHHCCCEEEEEEECEEEECCCCCEEEEEEHHHCCC HCMVLRKSAESLVRALSFKVFDEEQLDIAHSWFQKRGHPVAWVERPYQGRTLATTDCFGA EEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCC PIEFYFKMDRLEPIHQKYALYRGVRPLRIDHFNCFSPDVDKAVEFYGEIGFRVTEYTEDE CCEEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCC ESGKLWAAWTHRKGGVHDLAFTNGFGPRLHHTAFWVPTPLNIIDLCDLMATTGYVANIER CCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCC GPGRHGISNAFFLYILDPDRHRIEIYCSDYQTVDPDLEPIKWDLKDPQRQTLWGAPAPKS CCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHHCCCCCCCHH WFEHGSLFEGVEPVHSRLEASPIIAP HHHCCCHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA