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The map label for this gene is bioC [C]

Identifier: 110634801

GI number: 110634801

Start: 2637857

End: 2638639

Strand: Reverse

Name: bioC [C]

Synonym: Meso_2460

Alternate gene names: 110634801

Gene position: 2638639-2637857 (Counterclockwise)

Preceding gene: 110634802

Following gene: 110634800

Centisome position: 59.8

GC content: 63.86

Gene sequence:

>783_bases
ATGGGAACGGCACAGGTTCAGGGCGAACTCTGGGGTGCGAAGGCTCGTGATTGGGCAGAGTTGCAGGAGCCGGCTTGGCA
GCGAATCTACGAAGCTGCGATGGCACATGCGGGCGCAGGTCCGGGAAAGAAACTGCTCGATGTCGGCTGCGGCGCAGGAG
GCGCGCTGGTGGTGGCGCGCAAGCTCGGCGCGGAGGTCACTGGGCTTGATGGCGCGGAGAATCTCGTCGCTATCGCCCGT
CAGCGCTTGCCGGGTGCCCGGATCGATGTCGGCGAGATGGAGGAGCTTCCCTATAACGATGAAAGCTTCGAAATCGTTAC
AGGCATAAACGCGTTTCAGTTCGCCGCGGACGTTACCCGAGCGCTCTCGGAGGCGCGCCGCGTCTGCCGGCGCAACGGTA
CGGTTTTCATTCTCACCTGGGGGCGGCGTGAAGACTGCCAGCTGATGACGATCACCGTTTCTGCGGTCATGGCCCTTTTG
CCGCCGCCAGGCGGAAATGCGCCAGGCCCGCTCGTAGACGAGGGCACGATCAAAGCCGCGCTGGACAAAGCCGGGCTCCA
GGCCGTCGAAACCGGGGAGTTCGCCGCTGACCTCGTTTTCCCCGACGCTGAAACTGCTATCCGCGCGAACCTTGCCGCCG
GGGTGAACGTCAAGGCGGCGCGGCAGGTAGGCGAAGCTCGCGTGAGGGAAGCCATCAGCGCCACATTGCCTTCAGTCACA
CGCCCGGACGGATCTGTCGTCTGGAGCAACCGATTTCGCTGGACCATGACCAGGAGGAACTAG

Upstream 100 bases:

>100_bases
CATCGACGTGCGGTCAAAGGTTGCCGCCGAGTGATATCGCTGCGAGGGCGCCGGTGCTCACCGGTGCCCGTCCTTTATCT
CTCACTTTGGCGGGATCGGC

Downstream 100 bases:

>100_bases
CTCCAGAAAAGGGAGGATAGACCATGAACGATCTCAACCTGACCACCCTCGAGGGAGGCCAGACTACCATCAGCGTACCG
ATAATCGAGGCGCTTTCCAG

Product: methyltransferase type 11

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGTAQVQGELWGAKARDWAELQEPAWQRIYEAAMAHAGAGPGKKLLDVGCGAGGALVVARKLGAEVTGLDGAENLVAIAR
QRLPGARIDVGEMEELPYNDESFEIVTGINAFQFAADVTRALSEARRVCRRNGTVFILTWGRREDCQLMTITVSAVMALL
PPPGGNAPGPLVDEGTIKAALDKAGLQAVETGEFAADLVFPDAETAIRANLAAGVNVKAARQVGEARVREAISATLPSVT
RPDGSVVWSNRFRWTMTRRN

Sequences:

>Translated_260_residues
MGTAQVQGELWGAKARDWAELQEPAWQRIYEAAMAHAGAGPGKKLLDVGCGAGGALVVARKLGAEVTGLDGAENLVAIAR
QRLPGARIDVGEMEELPYNDESFEIVTGINAFQFAADVTRALSEARRVCRRNGTVFILTWGRREDCQLMTITVSAVMALL
PPPGGNAPGPLVDEGTIKAALDKAGLQAVETGEFAADLVFPDAETAIRANLAAGVNVKAARQVGEARVREAISATLPSVT
RPDGSVVWSNRFRWTMTRRN
>Mature_259_residues
GTAQVQGELWGAKARDWAELQEPAWQRIYEAAMAHAGAGPGKKLLDVGCGAGGALVVARKLGAEVTGLDGAENLVAIARQ
RLPGARIDVGEMEELPYNDESFEIVTGINAFQFAADVTRALSEARRVCRRNGTVFILTWGRREDCQLMTITVSAVMALLP
PPGGNAPGPLVDEGTIKAALDKAGLQAVETGEFAADLVFPDAETAIRANLAAGVNVKAARQVGEARVREAISATLPSVTR
PDGSVVWSNRFRWTMTRRN

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 27679; Mature: 27548

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAQVQGELWGAKARDWAELQEPAWQRIYEAAMAHAGAGPGKKLLDVGCGAGGALVVAR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHH
KLGAEVTGLDGAENLVAIARQRLPGARIDVGEMEELPYNDESFEIVTGINAFQFAADVTR
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHH
ALSEARRVCRRNGTVFILTWGRREDCQLMTITVSAVMALLPPPGGNAPGPLVDEGTIKAA
HHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LDKAGLQAVETGEFAADLVFPDAETAIRANLAAGVNVKAARQVGEARVREAISATLPSVT
HHHHCCHHECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RPDGSVVWSNRFRWTMTRRN
CCCCCEEECCCEEEEEECCC
>Mature Secondary Structure 
GTAQVQGELWGAKARDWAELQEPAWQRIYEAAMAHAGAGPGKKLLDVGCGAGGALVVAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHHHHH
KLGAEVTGLDGAENLVAIARQRLPGARIDVGEMEELPYNDESFEIVTGINAFQFAADVTR
HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCEEEEECCCHHHHHHHHHH
ALSEARRVCRRNGTVFILTWGRREDCQLMTITVSAVMALLPPPGGNAPGPLVDEGTIKAA
HHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LDKAGLQAVETGEFAADLVFPDAETAIRANLAAGVNVKAARQVGEARVREAISATLPSVT
HHHHCCHHECCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
RPDGSVVWSNRFRWTMTRRN
CCCCCEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155856 [H]