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The map label for this gene is 110634800

Identifier: 110634800

GI number: 110634800

Start: 2636394

End: 2637833

Strand: Reverse

Name: 110634800

Synonym: Meso_2459

Alternate gene names: NA

Gene position: 2637833-2636394 (Counterclockwise)

Preceding gene: 110634801

Following gene: 110634796

Centisome position: 59.78

GC content: 63.33

Gene sequence:

>1440_bases
ATGAACGATCTCAACCTGACCACCCTCGAGGGAGGCCAGACTACCATCAGCGTACCGATAATCGAGGCGCTTTCCAGCCA
GCTGCGCGGCATTGCGCTCACTCCCGCAGATGCCGGCTATGAAGAGCCGAGGACGATCTGGAACGCTATGATTGACCGGC
GTCCCGGCCTTATCATACGCTGCGCCGGGGCGGCTGATGTGGTGAGCGCGGTGCGGTTCGCGCGCGAGAACAATCTGCTC
GTCGCGGTGCGCGGTGGAGGCCACAACATCGCCGGCAATGCAGTTTGCGACGGCGGCCTCCTGATCGATTTGTCGCCCAT
GAAATCCGTCCGCGTCGACGCAGCTTTGCGGCGGGCCTGGGTCGAACCGGGGGCCACGCTGGCCGACGTAGACAAGGAAA
CGCAGGCATTCGGCCTCGTCGTTCCCAGCGGCATCAATTCGACGACCGGCATCGCCGGCCTCACGCTGGGCGGCGGCTTT
GGCTGGCTCACCCGCAAGTTCGGCCTGACGCTCGACAATCTTCTCTCCGCAGACGTGGTGACCGCCAATGGCGAGCTTCT
GCGTACCAGCCTTTCGGAAAACCCGGACCTGTTCTGGGCCATCCGCGGCGGGGGCGGCAATTTCGGTGTTGTCACCGCAT
TTGAATTCCAGCTCCACGATTTCGGGCCGCAGGTTCTGTCAGGTCTTGTCGTTCACCCGTTCGACAACGCCGCCTCGGTC
CTTCAACAGTACCGGGAAGCGCTCGACGATGCACCGGACGAGCTGACCTGCTGGGCGGTAATGCGGCAGGCGCCTCCACT
TCCATTCCTGCCGGCAGAGTGGCACGGTAAGGAAATTCTGGCCCTTGCGATGTGCTATTGCGGCGACATCGCAGAGGGGG
AGAAGGCGACGGCCCGGCTGCGGTCCATCGGCCGCCCTATTGCCGATGTTGTTGCTCCCACACCCTTTACCGCCTGGCAG
CAGGCGTTCGATCCTTTGCTGACCCCAGGCGCGCGCAACTACTGGAAGAGCCATGATTTCGGCGGGCTTTCCGACGAGAC
GATCGACGTCGTTCTCGAAGCGATCCGGCGGCTGCCGGGGCCGGAATGCGAAGTTTTCATCGGCCATGTGGGCGGCGCCG
CCGGCCGGATAGCGACGGAAGCCACGTCCTTCCCGCAGCGCAGCTCGCATTATGTCATGAATGTGCATGCCCGCTGGCGC
GAGCCGGAGATGGATCAGGCCTGCATCGACTGGGCGCGCGGGCTGTTCGAGGCCGCCAAGCCTTATGCCATCGGAACGGC
CTATATCAATTTCATGCCTGCGGACGAAACCGATCGTGTCGCGGCGGCTTACGGCCCAAACTATCAAAGGCTTGCGGAGC
TCAAGGCGCGCTACGATCCCACAAACCTGTTCCGCTTGAACCAGAATGTGCGTCCGACCGCCGAGTTGAGAGCCGCGTGA

Upstream 100 bases:

>100_bases
TGCCTTCAGTCACACGCCCGGACGGATCTGTCGTCTGGAGCAACCGATTTCGCTGGACCATGACCAGGAGGAACTAGCTC
CAGAAAAGGGAGGATAGACC

Downstream 100 bases:

>100_bases
GCAAGGGGCCAAGTCCCGCCGGCCAGGGCGCCAACCGGCCGGCGGGACAAGCCACTGCTACCTCCGTCAATGGAGCCTAA
CGCTTGGTCCCAATGCCAAT

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MNDLNLTTLEGGQTTISVPIIEALSSQLRGIALTPADAGYEEPRTIWNAMIDRRPGLIIRCAGAADVVSAVRFARENNLL
VAVRGGGHNIAGNAVCDGGLLIDLSPMKSVRVDAALRRAWVEPGATLADVDKETQAFGLVVPSGINSTTGIAGLTLGGGF
GWLTRKFGLTLDNLLSADVVTANGELLRTSLSENPDLFWAIRGGGGNFGVVTAFEFQLHDFGPQVLSGLVVHPFDNAASV
LQQYREALDDAPDELTCWAVMRQAPPLPFLPAEWHGKEILALAMCYCGDIAEGEKATARLRSIGRPIADVVAPTPFTAWQ
QAFDPLLTPGARNYWKSHDFGGLSDETIDVVLEAIRRLPGPECEVFIGHVGGAAGRIATEATSFPQRSSHYVMNVHARWR
EPEMDQACIDWARGLFEAAKPYAIGTAYINFMPADETDRVAAAYGPNYQRLAELKARYDPTNLFRLNQNVRPTAELRAA

Sequences:

>Translated_479_residues
MNDLNLTTLEGGQTTISVPIIEALSSQLRGIALTPADAGYEEPRTIWNAMIDRRPGLIIRCAGAADVVSAVRFARENNLL
VAVRGGGHNIAGNAVCDGGLLIDLSPMKSVRVDAALRRAWVEPGATLADVDKETQAFGLVVPSGINSTTGIAGLTLGGGF
GWLTRKFGLTLDNLLSADVVTANGELLRTSLSENPDLFWAIRGGGGNFGVVTAFEFQLHDFGPQVLSGLVVHPFDNAASV
LQQYREALDDAPDELTCWAVMRQAPPLPFLPAEWHGKEILALAMCYCGDIAEGEKATARLRSIGRPIADVVAPTPFTAWQ
QAFDPLLTPGARNYWKSHDFGGLSDETIDVVLEAIRRLPGPECEVFIGHVGGAAGRIATEATSFPQRSSHYVMNVHARWR
EPEMDQACIDWARGLFEAAKPYAIGTAYINFMPADETDRVAAAYGPNYQRLAELKARYDPTNLFRLNQNVRPTAELRAA
>Mature_479_residues
MNDLNLTTLEGGQTTISVPIIEALSSQLRGIALTPADAGYEEPRTIWNAMIDRRPGLIIRCAGAADVVSAVRFARENNLL
VAVRGGGHNIAGNAVCDGGLLIDLSPMKSVRVDAALRRAWVEPGATLADVDKETQAFGLVVPSGINSTTGIAGLTLGGGF
GWLTRKFGLTLDNLLSADVVTANGELLRTSLSENPDLFWAIRGGGGNFGVVTAFEFQLHDFGPQVLSGLVVHPFDNAASV
LQQYREALDDAPDELTCWAVMRQAPPLPFLPAEWHGKEILALAMCYCGDIAEGEKATARLRSIGRPIADVVAPTPFTAWQ
QAFDPLLTPGARNYWKSHDFGGLSDETIDVVLEAIRRLPGPECEVFIGHVGGAAGRIATEATSFPQRSSHYVMNVHARWR
EPEMDQACIDWARGLFEAAKPYAIGTAYINFMPADETDRVAAAYGPNYQRLAELKARYDPTNLFRLNQNVRPTAELRAA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 51737; Mature: 51737

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLNLTTLEGGQTTISVPIIEALSSQLRGIALTPADAGYEEPRTIWNAMIDRRPGLIIR
CCCCEEEEECCCCEEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEE
CAGAADVVSAVRFARENNLLVAVRGGGHNIAGNAVCDGGLLIDLSPMKSVRVDAALRRAW
ECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHH
VEPGATLADVDKETQAFGLVVPSGINSTTGIAGLTLGGGFGWLTRKFGLTLDNLLSADVV
CCCCCEEHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCEE
TANGELLRTSLSENPDLFWAIRGGGGNFGVVTAFEFQLHDFGPQVLSGLVVHPFDNAASV
ECCCHHEEEHHCCCCCEEEEEECCCCCEEEEEEEEEEEHHCCHHHHCCEEEECCCHHHHH
LQQYREALDDAPDELTCWAVMRQAPPLPFLPAEWHGKEILALAMCYCGDIAEGEKATARL
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
RSIGRPIADVVAPTPFTAWQQAFDPLLTPGARNYWKSHDFGGLSDETIDVVLEAIRRLPG
HHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
PECEVFIGHVGGAAGRIATEATSFPQRSSHYVMNVHARWREPEMDQACIDWARGLFEAAK
CCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
PYAIGTAYINFMPADETDRVAAAYGPNYQRLAELKARYDPTNLFRLNQNVRPTAELRAA
CEEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCC
>Mature Secondary Structure
MNDLNLTTLEGGQTTISVPIIEALSSQLRGIALTPADAGYEEPRTIWNAMIDRRPGLIIR
CCCCEEEEECCCCEEEEHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEE
CAGAADVVSAVRFARENNLLVAVRGGGHNIAGNAVCDGGLLIDLSPMKSVRVDAALRRAW
ECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHHH
VEPGATLADVDKETQAFGLVVPSGINSTTGIAGLTLGGGFGWLTRKFGLTLDNLLSADVV
CCCCCEEHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCEE
TANGELLRTSLSENPDLFWAIRGGGGNFGVVTAFEFQLHDFGPQVLSGLVVHPFDNAASV
ECCCHHEEEHHCCCCCEEEEEECCCCCEEEEEEEEEEEHHCCHHHHCCEEEECCCHHHHH
LQQYREALDDAPDELTCWAVMRQAPPLPFLPAEWHGKEILALAMCYCGDIAEGEKATARL
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
RSIGRPIADVVAPTPFTAWQQAFDPLLTPGARNYWKSHDFGGLSDETIDVVLEAIRRLPG
HHHCCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
PECEVFIGHVGGAAGRIATEATSFPQRSSHYVMNVHARWREPEMDQACIDWARGLFEAAK
CCEEEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
PYAIGTAYINFMPADETDRVAAAYGPNYQRLAELKARYDPTNLFRLNQNVRPTAELRAA
CEEEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]