| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634787
Identifier: 110634787
GI number: 110634787
Start: 2621866
End: 2622576
Strand: Direct
Name: 110634787
Synonym: Meso_2446
Alternate gene names: NA
Gene position: 2621866-2622576 (Clockwise)
Preceding gene: 110634786
Following gene: 110634788
Centisome position: 59.42
GC content: 63.57
Gene sequence:
>711_bases ATGAGCAGCGGAAACGACAATCTCATTTCCCGCTGGTCGCGCCGAAAACTTGCCGCCCGGTCGGCCGAAGCTCCCGCTGC GGATGAGAAGGAGCATGCGCCAGGCGAGGCGGCTGCGGTTATCGAAGCGAGCGGTCCCGCGCTGCAACCCGAAGTCCCGG AGGAAACGACGGCCGAAGGGGAAGCCGCTGAGACCCCGGAACCTCTCCCCCGCATTGAAGACCTGACTGCCGAAAGTGAC CTTACCGCCTTCCTGAGAAAGGGCATTCCCATGGCGCTGAAAAGCGCTGCGATGCGCAAGATGTGGTCGCTCAATCCGGC AATCCGCGATTATGTCGGTCCTGCGGAATATGCATGGGATTTCAACCAGCCGGGCTCGATGGGGGGGTTTGGACCGCTCG AAGCAAAGGAAACCGTGGTCAGCTTCCTGTCGAAAACAGTGCGCGAGCTGGAAGGCGGCACTGATGAACCGGCCGCTGTT CCGGCAGAACCGCAGGCGGCGGATAGCGAGCAACGCGCGGACGCTACATCGGAAGGCGGACCCGATATGGACTTGGCACA GTCCCCCCAGTACGAAGAGCCTATTCAGTCTGAGCCGAGGGACCAACCGCCTTCAGACGCGCCGCAGCAAATAGCGGAGG TTCGGCCAACAACCGAGCCAGCAACCCCGTCCCGGCCCGGGCCGCGCCACGGAAGTGCGCTGCCGCGCTGA
Upstream 100 bases:
>100_bases ACCACGTCGAGCGCCCCTTCATCAAACGTAAGCGCGACCGCGCCAGCCCGGAGGCATTGGCGAGGCGCGAGCCGAATTAC CCGCGCAGGGGTGACGTGGA
Downstream 100 bases:
>100_bases GACGGCGCATACCGGCAACTTGAACGGTGATGGGCCGGTGTAAGCTCCCGGTATATGCTATTGCAATTCCTTAGGGTCGG ACTACTATGAACGAACCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSSGNDNLISRWSRRKLAARSAEAPAADEKEHAPGEAAAVIEASGPALQPEVPEETTAEGEAAETPEPLPRIEDLTAESD LTAFLRKGIPMALKSAAMRKMWSLNPAIRDYVGPAEYAWDFNQPGSMGGFGPLEAKETVVSFLSKTVRELEGGTDEPAAV PAEPQAADSEQRADATSEGGPDMDLAQSPQYEEPIQSEPRDQPPSDAPQQIAEVRPTTEPATPSRPGPRHGSALPR
Sequences:
>Translated_236_residues MSSGNDNLISRWSRRKLAARSAEAPAADEKEHAPGEAAAVIEASGPALQPEVPEETTAEGEAAETPEPLPRIEDLTAESD LTAFLRKGIPMALKSAAMRKMWSLNPAIRDYVGPAEYAWDFNQPGSMGGFGPLEAKETVVSFLSKTVRELEGGTDEPAAV PAEPQAADSEQRADATSEGGPDMDLAQSPQYEEPIQSEPRDQPPSDAPQQIAEVRPTTEPATPSRPGPRHGSALPR >Mature_235_residues SSGNDNLISRWSRRKLAARSAEAPAADEKEHAPGEAAAVIEASGPALQPEVPEETTAEGEAAETPEPLPRIEDLTAESDL TAFLRKGIPMALKSAAMRKMWSLNPAIRDYVGPAEYAWDFNQPGSMGGFGPLEAKETVVSFLSKTVRELEGGTDEPAAVP AEPQAADSEQRADATSEGGPDMDLAQSPQYEEPIQSEPRDQPPSDAPQQIAEVRPTTEPATPSRPGPRHGSALPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25131; Mature: 25000
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGNDNLISRWSRRKLAARSAEAPAADEKEHAPGEAAAVIEASGPALQPEVPEETTAEG CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCHHCCCC EAAETPEPLPRIEDLTAESDLTAFLRKGIPMALKSAAMRKMWSLNPAIRDYVGPAEYAWD CCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHCCC FNQPGSMGGFGPLEAKETVVSFLSKTVRELEGGTDEPAAVPAEPQAADSEQRADATSEGG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PDMDLAQSPQYEEPIQSEPRDQPPSDAPQQIAEVRPTTEPATPSRPGPRHGSALPR CCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSGNDNLISRWSRRKLAARSAEAPAADEKEHAPGEAAAVIEASGPALQPEVPEETTAEG CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCEEEEECCCCCCCCCCCCHHCCCC EAAETPEPLPRIEDLTAESDLTAFLRKGIPMALKSAAMRKMWSLNPAIRDYVGPAEYAWD CCCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHCCC FNQPGSMGGFGPLEAKETVVSFLSKTVRELEGGTDEPAAVPAEPQAADSEQRADATSEGG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCC PDMDLAQSPQYEEPIQSEPRDQPPSDAPQQIAEVRPTTEPATPSRPGPRHGSALPR CCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA