| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634739
Identifier: 110634739
GI number: 110634739
Start: 2554112
End: 2555611
Strand: Reverse
Name: 110634739
Synonym: Meso_2397
Alternate gene names: NA
Gene position: 2555611-2554112 (Counterclockwise)
Preceding gene: 110634740
Following gene: 110634738
Centisome position: 57.92
GC content: 58.07
Gene sequence:
>1500_bases ATGACCGAATTTCTGCCCGTTGCTCTCCAACTTCTCACTGATCCGGGTACGCTGGCATTGGCCTGTCTGGCCACATTCCT GGGAATCGTGCTCGGAGCTCTCCCCGGCATTAGTTCCACGATGACACTGGCCGTGTTGTTGCCGTTCTCCTTTTCCATGT CTCCGGGCGTGGGCATGGTCTTCTTGATCGGGGCGTTCTACGGCAGCGTTTACGGCGGATCGGTCTCGGCAATCCTGCTT AATATTCCGGGCACACCCGGGTCTATGGTCACCCAGCTCGACGGCTACCCATTAGCCCGTCGCGGCGAGGCGGGAAAGGC GTTGACCTATGCTCTTCTAGCCTCGACATTCGGCGGCATTGTGGGTTTGACTGCCCTCGTCGTCTTCGCACCAACGCTTG CCCGCGCCGCCTTCGCGTTTCAGAGCCCCGAATATGCCGTGCTGATGATCTTCGGGCTTTCGATGCTGGCCTATGCATCG CCAGGCTCGACTTTTCTGGGCATTCTTGCGGGTGTACTCGGTCTCTTGCTCGGGACAGTAGGTCTCGACATGATCACCAA CCTTTCCCGTTTCGATTTCGGCGTTTCGCACCTTCAGGCGGGGATCAACTTGATACCCTTTGCGGTAGGCATCTTCGGGT TCGCGGAGATCCTGCGCCTGTTGGAACAGCCGATCGTGGTGGAAAAGGCCGCAACCCGCATCGGGTCGGTCTGGCCCAAA TTCACCGAGGTCATCAGGACCTGGGCCACCGCGGTCCGATCCGCAATCGCCGGAGTGATTGTTGGCATAATTCCGGCAGC CGGTTCGGCGATAGCCGTATCCATGTCATACGCTCAGGAGAAAAAGCTCTATGAAAAAACCGAGAAATTCGGCAATGGCA ATCCGCGCGGCATTGTTGCGGCCGAAACGGGCAATAATGCCGCGGTGGGCGCCGCGCTCATTCCTCTTCTGACTCTCGGC ATTCCGGGAGATACGATGACGGCAGTCCTTGTCGGAGCGTTGCTCATCCACGGGCTGCAGCCTGGACCGAAGCTTTTCAC GGATCATCCCGACTTCGTGGCGGCCATTTACTTGGCGCTCGCATTGACGATCCTTTTGACATTCCTCCTGGCGCTGCCTC TCATGCGGATTTTCGCCCGCCTGCTTTCGGCGCCGCCACGCTTTCTCTACGTTGGTGTACTCGTCCTTTGCGTCACCGGC TCTTTTGCGGTTCAGAATGCGTTATTCGATGTGCTGCTGATGATATTTTTTGGCGGCGCGGGGTATTTCATGCTCAAGCT GGGTATCCCAACATCACCGATCATGTTCGGCCTCGTGCTCGGCCCTCTGCTGGAAGAAAATCTCCGGCGTACGCTCATCG TTTATGGCGACTGGGCTGTGTTTTTTCAGCGCCCTGTCACCATTGGAATGCTCGCAGTGACTGCAGTTGTGCTGATGCTG CCGCTGGTCGACATTGCGCGGCACCGTTTCTGGCCGTCGCCTGTCGCTCGGCATGACTAG
Upstream 100 bases:
>100_bases CGCCATCTCGTTCAGTTACCGCTCGAAGCATCCCTGATCGTGGCGGCGATCTATGTCGTTTTCCACTACGGAATCCAGAT ACAGTTCCCCTAGGCCGGTC
Downstream 100 bases:
>100_bases CGATCCGCGAACGCCGCATCATCAGCATTGAGCATTCGTGTTCGCCATCCGGAGGGGCTCAGAACGAGCTTGACAGCGGA CTGATGTGATCACAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTEFLPVALQLLTDPGTLALACLATFLGIVLGALPGISSTMTLAVLLPFSFSMSPGVGMVFLIGAFYGSVYGGSVSAILL NIPGTPGSMVTQLDGYPLARRGEAGKALTYALLASTFGGIVGLTALVVFAPTLARAAFAFQSPEYAVLMIFGLSMLAYAS PGSTFLGILAGVLGLLLGTVGLDMITNLSRFDFGVSHLQAGINLIPFAVGIFGFAEILRLLEQPIVVEKAATRIGSVWPK FTEVIRTWATAVRSAIAGVIVGIIPAAGSAIAVSMSYAQEKKLYEKTEKFGNGNPRGIVAAETGNNAAVGAALIPLLTLG IPGDTMTAVLVGALLIHGLQPGPKLFTDHPDFVAAIYLALALTILLTFLLALPLMRIFARLLSAPPRFLYVGVLVLCVTG SFAVQNALFDVLLMIFFGGAGYFMLKLGIPTSPIMFGLVLGPLLEENLRRTLIVYGDWAVFFQRPVTIGMLAVTAVVLML PLVDIARHRFWPSPVARHD
Sequences:
>Translated_499_residues MTEFLPVALQLLTDPGTLALACLATFLGIVLGALPGISSTMTLAVLLPFSFSMSPGVGMVFLIGAFYGSVYGGSVSAILL NIPGTPGSMVTQLDGYPLARRGEAGKALTYALLASTFGGIVGLTALVVFAPTLARAAFAFQSPEYAVLMIFGLSMLAYAS PGSTFLGILAGVLGLLLGTVGLDMITNLSRFDFGVSHLQAGINLIPFAVGIFGFAEILRLLEQPIVVEKAATRIGSVWPK FTEVIRTWATAVRSAIAGVIVGIIPAAGSAIAVSMSYAQEKKLYEKTEKFGNGNPRGIVAAETGNNAAVGAALIPLLTLG IPGDTMTAVLVGALLIHGLQPGPKLFTDHPDFVAAIYLALALTILLTFLLALPLMRIFARLLSAPPRFLYVGVLVLCVTG SFAVQNALFDVLLMIFFGGAGYFMLKLGIPTSPIMFGLVLGPLLEENLRRTLIVYGDWAVFFQRPVTIGMLAVTAVVLML PLVDIARHRFWPSPVARHD >Mature_498_residues TEFLPVALQLLTDPGTLALACLATFLGIVLGALPGISSTMTLAVLLPFSFSMSPGVGMVFLIGAFYGSVYGGSVSAILLN IPGTPGSMVTQLDGYPLARRGEAGKALTYALLASTFGGIVGLTALVVFAPTLARAAFAFQSPEYAVLMIFGLSMLAYASP GSTFLGILAGVLGLLLGTVGLDMITNLSRFDFGVSHLQAGINLIPFAVGIFGFAEILRLLEQPIVVEKAATRIGSVWPKF TEVIRTWATAVRSAIAGVIVGIIPAAGSAIAVSMSYAQEKKLYEKTEKFGNGNPRGIVAAETGNNAAVGAALIPLLTLGI PGDTMTAVLVGALLIHGLQPGPKLFTDHPDFVAAIYLALALTILLTFLLALPLMRIFARLLSAPPRFLYVGVLVLCVTGS FAVQNALFDVLLMIFFGGAGYFMLKLGIPTSPIMFGLVLGPLLEENLRRTLIVYGDWAVFFQRPVTIGMLAVTAVVLMLP LVDIARHRFWPSPVARHD
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52519; Mature: 52388
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFLPVALQLLTDPGTLALACLATFLGIVLGALPGISSTMTLAVLLPFSFSMSPGVGMV CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHH FLIGAFYGSVYGGSVSAILLNIPGTPGSMVTQLDGYPLARRGEAGKALTYALLASTFGGI HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH VGLTALVVFAPTLARAAFAFQSPEYAVLMIFGLSMLAYASPGSTFLGILAGVLGLLLGTV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLDMITNLSRFDFGVSHLQAGINLIPFAVGIFGFAEILRLLEQPIVVEKAATRIGSVWPK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH FTEVIRTWATAVRSAIAGVIVGIIPAAGSAIAVSMSYAQEKKLYEKTEKFGNGNPRGIVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEE AETGNNAAVGAALIPLLTLGIPGDTMTAVLVGALLIHGLQPGPKLFTDHPDFVAAIYLAL EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ALTILLTFLLALPLMRIFARLLSAPPRFLYVGVLVLCVTGSFAVQNALFDVLLMIFFGGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC GYFMLKLGIPTSPIMFGLVLGPLLEENLRRTLIVYGDWAVFFQRPVTIGMLAVTAVVLML CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHHH PLVDIARHRFWPSPVARHD HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TEFLPVALQLLTDPGTLALACLATFLGIVLGALPGISSTMTLAVLLPFSFSMSPGVGMV CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHH FLIGAFYGSVYGGSVSAILLNIPGTPGSMVTQLDGYPLARRGEAGKALTYALLASTFGGI HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH VGLTALVVFAPTLARAAFAFQSPEYAVLMIFGLSMLAYASPGSTFLGILAGVLGLLLGTV HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLDMITNLSRFDFGVSHLQAGINLIPFAVGIFGFAEILRLLEQPIVVEKAATRIGSVWPK HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH FTEVIRTWATAVRSAIAGVIVGIIPAAGSAIAVSMSYAQEKKLYEKTEKFGNGNPRGIVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEE AETGNNAAVGAALIPLLTLGIPGDTMTAVLVGALLIHGLQPGPKLFTDHPDFVAAIYLAL EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH ALTILLTFLLALPLMRIFARLLSAPPRFLYVGVLVLCVTGSFAVQNALFDVLLMIFFGGA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC GYFMLKLGIPTSPIMFGLVLGPLLEENLRRTLIVYGDWAVFFQRPVTIGMLAVTAVVLML CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHHHHHHHH PLVDIARHRFWPSPVARHD HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]