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The map label for this gene is catB [H]

Identifier: 110634738

GI number: 110634738

Start: 2552832

End: 2553992

Strand: Reverse

Name: catB [H]

Synonym: Meso_2396

Alternate gene names: 110634738

Gene position: 2553992-2552832 (Counterclockwise)

Preceding gene: 110634739

Following gene: 110634737

Centisome position: 57.88

GC content: 60.38

Gene sequence:

>1161_bases
GTGGTAACAATTTCATCGATAGAAACGCGCCTGGTTCGCCTGCCGACCCGACGCGTGCATAAATGGACTGGGCTTACTGA
GCCCATCGGACAGTATCTTCTGGTCAAAATGACCGGCTCGGATGGAACAGTCGGCTGGGGCGAAGCCCCTGCACTCAAGG
ACTGGGGCGGTGAGTTCGGGCGTTATTTCGGGGAAAGCACAGCGATCGTGGAGACGGTCATTTCCCGATATCTCGCCCCC
GCGGTCCAAGGCCTGGAGGTGGGCCATCCCGCCGTACTCCATCAGAAGATGGACGCCATCATCAAGGGCTATCCCTATGC
AAAGGCGGCGTTGGATTTCGCCTATTATGATCTCACAGGAAAGGTATTGGGCGTGCCCGTCCACGTCCTTCTGGGCGGCA
AGCTGCGCGACACTGTGCCGGTGACCCATTCCATTGGCCTTCTCAATATCGAAGAGGCGGTCCGGGAGGTCGGGCAAGTC
GTCCGCGACGGCATCCGCACAATAAAGATCAAGATCGGCGTCGATCCAGATCGCGATGTCGCGATCGTTGAAGCCATTCG
CCGCGAAGTCGGACCGGACATCTCGTTATGTGTGGATGCCAATGAGGGCTATACGACCCCCGGTCAGGCAATTCAGGCGG
TTCGCCGAATGGAGGCCTCACGCCTCATCTATGTAGAGCAGCCCGTCATGGGCATAGAGCGCATTGCCGCCGTAGCGCGT
GCCATCGAGGCTCCGGTTATGGCCGACGAGTCGGCATGGAACGCGCACGACGTCATTCAGATCGTTGCCCAGAATGCCGC
CCAGATCGTCTCGATCTACACCACAAAGCCCGGGGGTCTTTACAGGGCCATGCAGGTTTCCGCGGTCTGCCAGGCCGCCG
GCATCATTTGCAACGTCAACGGCTCGGTCGAAACCGGCGTCGGCAATCTCGCCAATGTCCATCTCGCCGCCGCCGCGCCC
GCGGTCACCCTTTCCAACGTCATCCCCGTCTCAATGCCGGCCGAGCATCTCAACGGCCGGATCGGCGGCATCTACTATGC
GGACGATTTGCTGGCCGAGCCCATGACCTTCGAGGATGGAGGGATCAGGGTTCCGGACGGGCCGGGCATGGGCTTGCCCA
TCGATCCGGCCAAGGTGGACAAATATTCGGTCACGATCTGA

Upstream 100 bases:

>100_bases
CATCAGCATTGAGCATTCGTGTTCGCCATCCGGAGGGGCTCAGAACGAGCTTGACAGCGGACTGATGTGATCACAAAATG
GAATCACAAGGAGTTTGATC

Downstream 100 bases:

>100_bases
AGAGAAGCACGATGCGCAAAGCCATTACCGAGAAACTTATTGGGCTCATGAAGAATGAGGGGTTGGATGCGATCGTGACG
TCTTCCCCGGAAAATTTTGC

Product: mandelate racemase/muconate lactonizing-like protein

Products: NA

Alternate protein names: Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MVTISSIETRLVRLPTRRVHKWTGLTEPIGQYLLVKMTGSDGTVGWGEAPALKDWGGEFGRYFGESTAIVETVISRYLAP
AVQGLEVGHPAVLHQKMDAIIKGYPYAKAALDFAYYDLTGKVLGVPVHVLLGGKLRDTVPVTHSIGLLNIEEAVREVGQV
VRDGIRTIKIKIGVDPDRDVAIVEAIRREVGPDISLCVDANEGYTTPGQAIQAVRRMEASRLIYVEQPVMGIERIAAVAR
AIEAPVMADESAWNAHDVIQIVAQNAAQIVSIYTTKPGGLYRAMQVSAVCQAAGIICNVNGSVETGVGNLANVHLAAAAP
AVTLSNVIPVSMPAEHLNGRIGGIYYADDLLAEPMTFEDGGIRVPDGPGMGLPIDPAKVDKYSVTI

Sequences:

>Translated_386_residues
MVTISSIETRLVRLPTRRVHKWTGLTEPIGQYLLVKMTGSDGTVGWGEAPALKDWGGEFGRYFGESTAIVETVISRYLAP
AVQGLEVGHPAVLHQKMDAIIKGYPYAKAALDFAYYDLTGKVLGVPVHVLLGGKLRDTVPVTHSIGLLNIEEAVREVGQV
VRDGIRTIKIKIGVDPDRDVAIVEAIRREVGPDISLCVDANEGYTTPGQAIQAVRRMEASRLIYVEQPVMGIERIAAVAR
AIEAPVMADESAWNAHDVIQIVAQNAAQIVSIYTTKPGGLYRAMQVSAVCQAAGIICNVNGSVETGVGNLANVHLAAAAP
AVTLSNVIPVSMPAEHLNGRIGGIYYADDLLAEPMTFEDGGIRVPDGPGMGLPIDPAKVDKYSVTI
>Mature_386_residues
MVTISSIETRLVRLPTRRVHKWTGLTEPIGQYLLVKMTGSDGTVGWGEAPALKDWGGEFGRYFGESTAIVETVISRYLAP
AVQGLEVGHPAVLHQKMDAIIKGYPYAKAALDFAYYDLTGKVLGVPVHVLLGGKLRDTVPVTHSIGLLNIEEAVREVGQV
VRDGIRTIKIKIGVDPDRDVAIVEAIRREVGPDISLCVDANEGYTTPGQAIQAVRRMEASRLIYVEQPVMGIERIAAVAR
AIEAPVMADESAWNAHDVIQIVAQNAAQIVSIYTTKPGGLYRAMQVSAVCQAAGIICNVNGSVETGVGNLANVHLAAAAP
AVTLSNVIPVSMPAEHLNGRIGGIYYADDLLAEPMTFEDGGIRVPDGPGMGLPIDPAKVDKYSVTI

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013370
- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =5.5.1.1 [H]

Molecular weight: Translated: 41220; Mature: 41220

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTISSIETRLVRLPTRRVHKWTGLTEPIGQYLLVKMTGSDGTVGWGEAPALKDWGGEFG
CEEHHHHHHHHHHCCHHHHHHHCCCCHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
RYFGESTAIVETVISRYLAPAVQGLEVGHPAVLHQKMDAIIKGYPYAKAALDFAYYDLTG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEECCC
KVLGVPVHVLLGGKLRDTVPVTHSIGLLNIEEAVREVGQVVRDGIRTIKIKIGVDPDRDV
CEECCEEEEEECCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
AIVEAIRREVGPDISLCVDANEGYTTPGQAIQAVRRMEASRLIYVEQPVMGIERIAAVAR
HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHH
AIEAPVMADESAWNAHDVIQIVAQNAAQIVSIYTTKPGGLYRAMQVSAVCQAAGIICNVN
HHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECC
GSVETGVGNLANVHLAAAAPAVTLSNVIPVSMPAEHLNGRIGGIYYADDLLAEPMTFEDG
CCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHCCCCCEEEEEHHHHCCCCEECCC
GIRVPDGPGMGLPIDPAKVDKYSVTI
CEECCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MVTISSIETRLVRLPTRRVHKWTGLTEPIGQYLLVKMTGSDGTVGWGEAPALKDWGGEFG
CEEHHHHHHHHHHCCHHHHHHHCCCCHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
RYFGESTAIVETVISRYLAPAVQGLEVGHPAVLHQKMDAIIKGYPYAKAALDFAYYDLTG
HHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEEECCC
KVLGVPVHVLLGGKLRDTVPVTHSIGLLNIEEAVREVGQVVRDGIRTIKIKIGVDPDRDV
CEECCEEEEEECCCCCCCCCCHHCCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCCH
AIVEAIRREVGPDISLCVDANEGYTTPGQAIQAVRRMEASRLIYVEQPVMGIERIAAVAR
HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHH
AIEAPVMADESAWNAHDVIQIVAQNAAQIVSIYTTKPGGLYRAMQVSAVCQAAGIICNVN
HHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECC
GSVETGVGNLANVHLAAAAPAVTLSNVIPVSMPAEHLNGRIGGIYYADDLLAEPMTFEDG
CCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHCCCCCEEEEEHHHHCCCCEECCC
GIRVPDGPGMGLPIDPAKVDKYSVTI
CEECCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990288 [H]