| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634731
Identifier: 110634731
GI number: 110634731
Start: 2543953
End: 2544942
Strand: Reverse
Name: 110634731
Synonym: Meso_2389
Alternate gene names: NA
Gene position: 2544942-2543953 (Counterclockwise)
Preceding gene: 110634732
Following gene: 110634730
Centisome position: 57.68
GC content: 58.79
Gene sequence:
>990_bases ATGTTATCGACCACCATATCGAAGGCCATTGCGCTCACACTTGCGGCAGTGGGGTTACTGCTGCAGGTCGAATCCGCAGC GGCCCAGGGATATCCTGAGAGGACAGTGCGCCTCATCGTGCCCTTCGCTGCGGGCGGCGGTGTCGGAGTCTTCGGCCAGC AGCTTGTTGCCCATTTGGGGCCCGAACTGGGACAGGAGATTGTCCTTGAATATCTTCCGGGTTCAGGCGGCATGATCGGA GCTGCAGCAGTCGCTCAGGCAGCCCCAGACGGCTATACGCTGTTGCTGTCGACCGCCGGGCCGATCGAGGTCAGTCCCGT TACCTATGAAAACGTGCCTTTCGACCCGATCGAGGATTTCGAGCACATCACCCGGCTGGGCAGCGTTCCCTACATTCTCG TCGCGCACAAGAAGCTGGGTGTCAAAACGCTTGAGGAGTTCATCGAACTCGCGAAGAAGCAGCCGGGGGCGCTGAGTTAC GGCTCCTCCGGATCAGGCACGATAAATTTCCTGGCCGCAGAACTGCTCAAGATCCGTGCCGGTATCGATCTGGTTCATAT CCCCTATCAGGGCAATGGCCCCCAGATGGTTGACCTTGTGGCAGGACGGCTTGATGTCTCCATGCTGGTACCCAACGCCA TTACTCAATATGTCGACGACGGCACGTTGATTCCGCTTGCGACCACCGGCAGCGAACGCTCCAGCAATTATCCCGATGTC CCCACCTTCAAGGAACTCGGGGTCGATGTCGAAGTCAGCAGCTGGTATGGCATCTCCGCTCCCCGCGGCACGGATCCCAA GATTATTGCCGCTCTTGACGAGACCTCCCGCAAGCTCATGCAGGGGGATAGCCTGCCTGCCGAGCTAAAGGGCCTGGGCA TCGATGCCGATGTCAGCGCTTCGCCCGAGGAGTTCGAGAAGGATATAGCCGCTCAGCTTGCCCTCTGGGCGCAGGTCATG AAGCAGGCTGGTATCGAAAAGATCAAATAA
Upstream 100 bases:
>100_bases GATCGCGGGCAGCGACAGTGATCGCGCTTGGCTCACCAATATCGAATGAATGCCTTCGCGCTTCAAGCTTCACAAATAAG AACCAGAGGGAGATTATTAA
Downstream 100 bases:
>100_bases ACCAGGTGAAAACGGCCGGCAGCCCTGCCGGCCATCCCGCCTTAACGCTTGCCCATTCGAAAGGGGCGACGATGCGATAC AAGATCAACAAGAACACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MLSTTISKAIALTLAAVGLLLQVESAAAQGYPERTVRLIVPFAAGGGVGVFGQQLVAHLGPELGQEIVLEYLPGSGGMIG AAAVAQAAPDGYTLLLSTAGPIEVSPVTYENVPFDPIEDFEHITRLGSVPYILVAHKKLGVKTLEEFIELAKKQPGALSY GSSGSGTINFLAAELLKIRAGIDLVHIPYQGNGPQMVDLVAGRLDVSMLVPNAITQYVDDGTLIPLATTGSERSSNYPDV PTFKELGVDVEVSSWYGISAPRGTDPKIIAALDETSRKLMQGDSLPAELKGLGIDADVSASPEEFEKDIAAQLALWAQVM KQAGIEKIK
Sequences:
>Translated_329_residues MLSTTISKAIALTLAAVGLLLQVESAAAQGYPERTVRLIVPFAAGGGVGVFGQQLVAHLGPELGQEIVLEYLPGSGGMIG AAAVAQAAPDGYTLLLSTAGPIEVSPVTYENVPFDPIEDFEHITRLGSVPYILVAHKKLGVKTLEEFIELAKKQPGALSY GSSGSGTINFLAAELLKIRAGIDLVHIPYQGNGPQMVDLVAGRLDVSMLVPNAITQYVDDGTLIPLATTGSERSSNYPDV PTFKELGVDVEVSSWYGISAPRGTDPKIIAALDETSRKLMQGDSLPAELKGLGIDADVSASPEEFEKDIAAQLALWAQVM KQAGIEKIK >Mature_329_residues MLSTTISKAIALTLAAVGLLLQVESAAAQGYPERTVRLIVPFAAGGGVGVFGQQLVAHLGPELGQEIVLEYLPGSGGMIG AAAVAQAAPDGYTLLLSTAGPIEVSPVTYENVPFDPIEDFEHITRLGSVPYILVAHKKLGVKTLEEFIELAKKQPGALSY GSSGSGTINFLAAELLKIRAGIDLVHIPYQGNGPQMVDLVAGRLDVSMLVPNAITQYVDDGTLIPLATTGSERSSNYPDV PTFKELGVDVEVSSWYGISAPRGTDPKIIAALDETSRKLMQGDSLPAELKGLGIDADVSASPEEFEKDIAAQLALWAQVM KQAGIEKIK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34577; Mature: 34577
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTTISKAIALTLAAVGLLLQVESAAAQGYPERTVRLIVPFAAGGGVGVFGQQLVAHLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHC PELGQEIVLEYLPGSGGMIGAAAVAQAAPDGYTLLLSTAGPIEVSPVTYENVPFDPIEDF HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEEEEEECCCCEEECCEEECCCCCCHHHHH EHITRLGSVPYILVAHKKLGVKTLEEFIELAKKQPGALSYGSSGSGTINFLAAELLKIRA HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHC GIDLVHIPYQGNGPQMVDLVAGRLDVSMLVPNAITQYVDDGTLIPLATTGSERSSNYPDV CCEEEEECCCCCCCEEHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCCCCCCCCCCC PTFKELGVDVEVSSWYGISAPRGTDPKIIAALDETSRKLMQGDSLPAELKGLGIDADVSA CCHHHCCCCEEECCEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCHHHHCCCCCCCCCC SPEEFEKDIAAQLALWAQVMKQAGIEKIK CHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MLSTTISKAIALTLAAVGLLLQVESAAAQGYPERTVRLIVPFAAGGGVGVFGQQLVAHLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHC PELGQEIVLEYLPGSGGMIGAAAVAQAAPDGYTLLLSTAGPIEVSPVTYENVPFDPIEDF HHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCEEEEEECCCCEEECCEEECCCCCCHHHHH EHITRLGSVPYILVAHKKLGVKTLEEFIELAKKQPGALSYGSSGSGTINFLAAELLKIRA HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHC GIDLVHIPYQGNGPQMVDLVAGRLDVSMLVPNAITQYVDDGTLIPLATTGSERSSNYPDV CCEEEEECCCCCCCEEHHHHHHHHHHHHHCHHHHHHHCCCCCEEEEEECCCCCCCCCCCC PTFKELGVDVEVSSWYGISAPRGTDPKIIAALDETSRKLMQGDSLPAELKGLGIDADVSA CCHHHCCCCEEECCEECCCCCCCCCCCEEEEECHHHHHHHCCCCCCHHHHCCCCCCCCCC SPEEFEKDIAAQLALWAQVMKQAGIEKIK CHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]