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The map label for this gene is potD [C]

Identifier: 110634715

GI number: 110634715

Start: 2524995

End: 2526089

Strand: Reverse

Name: potD [C]

Synonym: Meso_2372

Alternate gene names: 110634715

Gene position: 2526089-2524995 (Counterclockwise)

Preceding gene: 110634716

Following gene: 110634714

Centisome position: 57.25

GC content: 60.46

Gene sequence:

>1095_bases
ATGGTCGACAGGGAGACGACAAAAAACTCACGCCTGGATTTTACGCGCCGCCAGTTCTTGACCACCGCCGCGGGCGCAGC
GACCGCCGCGGTGGCCGGTCCATTGGTGGTAACGCCGGGCAAGGCGCAGGCAAGTGCGGTCGTGCGCGTGGCCGACGATG
GCGGCACGCTGAGCAAGGCGCGGGAACGGCTATTCTTCAAGCCGTTCATGGAGCGCACGGGCATCGAAGTGCAGGTCCAT
GTCGGCCAGCATGACCTGTCCAAGATGAAGGCGATGGCCCAGACCGACAACCTGGAATACGATATGGTGCTGGCCAGCGG
CAGCATCGCAGCGGCGGCAACGAAGAGCGGGCTGCTCGCTGAGATCGACAAGTCCAAGCTGGACCTTTCAAACTACATGG
TCGAGGAGTGGAACCAGCCGACCTGGATCGCCTGGCAATATTACACGGCAGGGCTGACCTACAACACCGACACAGTGGCG
GAGGACAAGGTGCCACGTTCCTGGGTCGATTATTGGGATTCGGAAAAGTTTCCCGGTCGCCGCGGATTTCGCACCAGTCC
CTATGAGACACTCGAACAAGCGCTGCTGGCCGATGGCGTCCCGATCACCGATCTGTACCCCATCGACATGGACCGCGCTT
TCGCGTCGCTCGACAAGATCAAGGATAAGGTCAACGTTTGGGTCGCGGAGACATCACAAACCGTTCAGTTGCTTCAGCAG
AACGAATTGGACTTCTGCGTGTCCTACAGCGGTCGCGTCGAGCAGGCGCGCGCCAACGGCATCCCCGTCGGCTTCGTCTA
TGATTCGGCGATCTCGTCCCCCACGGCGATCTGGGTGATGAAGGGCACGCCGAACTACGATGCCAGCTTGAAATTGATGC
AGTGGTTCCTGACAGGCGAGCCGGGGGTTGCGTGGTTCACCGAATTCCCCGGCAACGGCCCGACCGACAGGAAAACCTTC
GAAGCTCTTCCTGACGACATCAAGGCCAAGCTGCCGAGCTTCGACAATCCGTCGGCAGTGTGGGTGGATGTCGATTGGTG
GGCCGACAATCTCGAGGCGGCAACCGTTCGCTACAAGACTTGGCTGCTGAGCTAA

Upstream 100 bases:

>100_bases
CCCACGAAAGCCGTTGACAGGCAGCAGCAAGAGCGTGATAAATATAGGAACACCGTTCCGAATAATAGCAAAGCTTGGTT
GAACTCTAAGGGGAAGTTCT

Downstream 100 bases:

>100_bases
CAACCGGGATATTGCGGGCGAGCGTCGGCTCGCCCGTTTCTCAATGTAAACACCGCCGCCCCGTCTGACGGCGGGCGCCG
CCTTGCAAGCCACTTTGCGC

Product: twin-arginine translocation pathway signal

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: None

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MVDRETTKNSRLDFTRRQFLTTAAGAATAAVAGPLVVTPGKAQASAVVRVADDGGTLSKARERLFFKPFMERTGIEVQVH
VGQHDLSKMKAMAQTDNLEYDMVLASGSIAAAATKSGLLAEIDKSKLDLSNYMVEEWNQPTWIAWQYYTAGLTYNTDTVA
EDKVPRSWVDYWDSEKFPGRRGFRTSPYETLEQALLADGVPITDLYPIDMDRAFASLDKIKDKVNVWVAETSQTVQLLQQ
NELDFCVSYSGRVEQARANGIPVGFVYDSAISSPTAIWVMKGTPNYDASLKLMQWFLTGEPGVAWFTEFPGNGPTDRKTF
EALPDDIKAKLPSFDNPSAVWVDVDWWADNLEAATVRYKTWLLS

Sequences:

>Translated_364_residues
MVDRETTKNSRLDFTRRQFLTTAAGAATAAVAGPLVVTPGKAQASAVVRVADDGGTLSKARERLFFKPFMERTGIEVQVH
VGQHDLSKMKAMAQTDNLEYDMVLASGSIAAAATKSGLLAEIDKSKLDLSNYMVEEWNQPTWIAWQYYTAGLTYNTDTVA
EDKVPRSWVDYWDSEKFPGRRGFRTSPYETLEQALLADGVPITDLYPIDMDRAFASLDKIKDKVNVWVAETSQTVQLLQQ
NELDFCVSYSGRVEQARANGIPVGFVYDSAISSPTAIWVMKGTPNYDASLKLMQWFLTGEPGVAWFTEFPGNGPTDRKTF
EALPDDIKAKLPSFDNPSAVWVDVDWWADNLEAATVRYKTWLLS
>Mature_364_residues
MVDRETTKNSRLDFTRRQFLTTAAGAATAAVAGPLVVTPGKAQASAVVRVADDGGTLSKARERLFFKPFMERTGIEVQVH
VGQHDLSKMKAMAQTDNLEYDMVLASGSIAAAATKSGLLAEIDKSKLDLSNYMVEEWNQPTWIAWQYYTAGLTYNTDTVA
EDKVPRSWVDYWDSEKFPGRRGFRTSPYETLEQALLADGVPITDLYPIDMDRAFASLDKIKDKVNVWVAETSQTVQLLQQ
NELDFCVSYSGRVEQARANGIPVGFVYDSAISSPTAIWVMKGTPNYDASLKLMQWFLTGEPGVAWFTEFPGNGPTDRKTF
EALPDDIKAKLPSFDNPSAVWVDVDWWADNLEAATVRYKTWLLS

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40560; Mature: 40560

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDRETTKNSRLDFTRRQFLTTAAGAATAAVAGPLVVTPGKAQASAVVRVADDGGTLSKA
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHH
RERLFFKPFMERTGIEVQVHVGQHDLSKMKAMAQTDNLEYDMVLASGSIAAAATKSGLLA
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEHHHCCCCCE
EIDKSKLDLSNYMVEEWNQPTWIAWQYYTAGLTYNTDTVAEDKVPRSWVDYWDSEKFPGR
ECCHHHHHHHHHHHHHCCCCCEEEEEEEEECEEECCCCCCCCCCCHHHHHHCCCCCCCCC
RGFRTSPYETLEQALLADGVPITDLYPIDMDRAFASLDKIKDKVNVWVAETSQTVQLLQQ
CCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH
NELDFCVSYSGRVEQARANGIPVGFVYDSAISSPTAIWVMKGTPNYDASLKLMQWFLTGE
CCCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCHHEEEEEEECCC
PGVAWFTEFPGNGPTDRKTFEALPDDIKAKLPSFDNPSAVWVDVDWWADNLEAATVRYKT
CCEEEEEECCCCCCCCCHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEE
WLLS
EECC
>Mature Secondary Structure
MVDRETTKNSRLDFTRRQFLTTAAGAATAAVAGPLVVTPGKAQASAVVRVADDGGTLSKA
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCEEEEEEECCCCCHHHH
RERLFFKPFMERTGIEVQVHVGQHDLSKMKAMAQTDNLEYDMVLASGSIAAAATKSGLLA
HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCEEEHHHCCCCCE
EIDKSKLDLSNYMVEEWNQPTWIAWQYYTAGLTYNTDTVAEDKVPRSWVDYWDSEKFPGR
ECCHHHHHHHHHHHHHCCCCCEEEEEEEEECEEECCCCCCCCCCCHHHHHHCCCCCCCCC
RGFRTSPYETLEQALLADGVPITDLYPIDMDRAFASLDKIKDKVNVWVAETSQTVQLLQQ
CCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH
NELDFCVSYSGRVEQARANGIPVGFVYDSAISSPTAIWVMKGTPNYDASLKLMQWFLTGE
CCCCEEEECCCCHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCCHHEEEEEEECCC
PGVAWFTEFPGNGPTDRKTFEALPDDIKAKLPSFDNPSAVWVDVDWWADNLEAATVRYKT
CCEEEEEECCCCCCCCCHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEE
WLLS
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA