| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634692
Identifier: 110634692
GI number: 110634692
Start: 2497254
End: 2498450
Strand: Reverse
Name: 110634692
Synonym: Meso_2348
Alternate gene names: NA
Gene position: 2498450-2497254 (Counterclockwise)
Preceding gene: 110634693
Following gene: 110634691
Centisome position: 56.62
GC content: 65.16
Gene sequence:
>1197_bases ATGACCAATGTTCAGATTCTGGATGGCGCTCGAGACGGAAATGGTGGCTACAAGGTGGATGTCGGCCGCGGCCAACGCAT CGGCCGCGTGTCGTCGGAGTGGTTCAACCGCCCCGCCGACGAGCGCTACCTGTCCCTGTCGGACCTCATGGCCTCGGTCC GCGGCCGCGCCGAACGCAGCCGAACCCGTACCGTGGAAAGCGCCGCGATCCGCGTGGAGGCCAGCCGCGACGACGCCGAA CGGCTCGACCTCGTCCTGGCCGGCGCCGATGCGCCCGTCGCGCCGACGCACTGGAGCTTCGGACAACTCGCGAGCATCGT CGGCGCGCCGGCCGCCTATCTGCGCCAGCTTCCGGCACCGCTTGCCGGCATCAACCTGCAATACGGCCTTACCTCGCACC TTGCCGAGCAGGTGAAGACACTGGAGGTCGAAGACGGCCGGGTCGAGCTGCGTGCCGTCACCGGCCCGGACTATGGCCGC ATCTATGACCATGAACTGGTCGCGGCCGTCCAGAAAATCGCTGGCAACGGCACGGGCGACACGCGCTGGAAGATTCCCGG CGTACTCGACTGGTCAACCGGCATCTACAATCCGCGCGTCGACATCACGTCAGACACGACCACGCTTTACGCCTCGGATC GCGACGTGTTCCTCTTTCTGGTGGATGACCTCAACCCGATCGAGGCCGGCAGGCTGCCGGATGGCTCGCCCGACCTCTAC TTCCGGGGTTTCTACTGCTGGAACTCCGAGGTCGGCGCGAAATCGCTCGGCATAGCGAGTTTCTATCTCCGCGCCGTATG CCAGAACCGGAATCTCTGGGGCGTCGAGGACTTCGAGGAGATCACCATCCGGCACTCCAAATATGCCGCCTCGCGCTTCG CGCATCAGGCGGCGCCGGCACTGACCCGTTTCGCGAACTCCTCGCCCACGCCTTTCGTCAACGGCATCCGAGCGGCACGG GAAAAAATCGTTGCCCGCAACGACGAGGATCGCAGGGAATTCCTGCGCAAGCGCGGCTTCTCCAAGGCCGAGACGGCGAA GATCATCGACACGGTGCTTGCCGAGGAGGGCCGCAAGCCCGAGAGCGTCTTCGACTTCGTCCAGGGCATCACGGCCGTTG CGCGCGACAAGCCGCATCAGGATTCCCGTCTCGATCTGGAGGGCAAGGCCAAGAAGCTGCTCGATCGCGCAGCCTGA
Upstream 100 bases:
>100_bases GTGCCGTGCGCGCTCGGCGAGAGTGAGAGTGCGGCCGGCTTCGCCGTGACGGGTTGAGGGCTAGGAGAGAGGCTCCCGGC GCCCGTCACGGAGAACTCCT
Downstream 100 bases:
>100_bases ATTCCGCAAAGCCGGAAATACGCATGCCCGTGTCTCCGGCTCTGCGCCTCTTCGGATGCCGGTGCGGCGCCGTCCTCTAA AGTGAGAGGGCGGCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTNVQILDGARDGNGGYKVDVGRGQRIGRVSSEWFNRPADERYLSLSDLMASVRGRAERSRTRTVESAAIRVEASRDDAE RLDLVLAGADAPVAPTHWSFGQLASIVGAPAAYLRQLPAPLAGINLQYGLTSHLAEQVKTLEVEDGRVELRAVTGPDYGR IYDHELVAAVQKIAGNGTGDTRWKIPGVLDWSTGIYNPRVDITSDTTTLYASDRDVFLFLVDDLNPIEAGRLPDGSPDLY FRGFYCWNSEVGAKSLGIASFYLRAVCQNRNLWGVEDFEEITIRHSKYAASRFAHQAAPALTRFANSSPTPFVNGIRAAR EKIVARNDEDRREFLRKRGFSKAETAKIIDTVLAEEGRKPESVFDFVQGITAVARDKPHQDSRLDLEGKAKKLLDRAA
Sequences:
>Translated_398_residues MTNVQILDGARDGNGGYKVDVGRGQRIGRVSSEWFNRPADERYLSLSDLMASVRGRAERSRTRTVESAAIRVEASRDDAE RLDLVLAGADAPVAPTHWSFGQLASIVGAPAAYLRQLPAPLAGINLQYGLTSHLAEQVKTLEVEDGRVELRAVTGPDYGR IYDHELVAAVQKIAGNGTGDTRWKIPGVLDWSTGIYNPRVDITSDTTTLYASDRDVFLFLVDDLNPIEAGRLPDGSPDLY FRGFYCWNSEVGAKSLGIASFYLRAVCQNRNLWGVEDFEEITIRHSKYAASRFAHQAAPALTRFANSSPTPFVNGIRAAR EKIVARNDEDRREFLRKRGFSKAETAKIIDTVLAEEGRKPESVFDFVQGITAVARDKPHQDSRLDLEGKAKKLLDRAA >Mature_397_residues TNVQILDGARDGNGGYKVDVGRGQRIGRVSSEWFNRPADERYLSLSDLMASVRGRAERSRTRTVESAAIRVEASRDDAER LDLVLAGADAPVAPTHWSFGQLASIVGAPAAYLRQLPAPLAGINLQYGLTSHLAEQVKTLEVEDGRVELRAVTGPDYGRI YDHELVAAVQKIAGNGTGDTRWKIPGVLDWSTGIYNPRVDITSDTTTLYASDRDVFLFLVDDLNPIEAGRLPDGSPDLYF RGFYCWNSEVGAKSLGIASFYLRAVCQNRNLWGVEDFEEITIRHSKYAASRFAHQAAPALTRFANSSPTPFVNGIRAARE KIVARNDEDRREFLRKRGFSKAETAKIIDTVLAEEGRKPESVFDFVQGITAVARDKPHQDSRLDLEGKAKKLLDRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43984; Mature: 43853
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVQILDGARDGNGGYKVDVGRGQRIGRVSSEWFNRPADERYLSLSDLMASVRGRAERS CCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RTRTVESAAIRVEASRDDAERLDLVLAGADAPVAPTHWSFGQLASIVGAPAAYLRQLPAP HHHHHHHHEEEEECCCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCC LAGINLQYGLTSHLAEQVKTLEVEDGRVELRAVTGPDYGRIYDHELVAAVQKIAGNGTGD CCCCEEECCHHHHHHHHHHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC TRWKIPGVLDWSTGIYNPRVDITSDTTTLYASDRDVFLFLVDDLNPIEAGRLPDGSPDLY CEEECCCEEECCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEE FRGFYCWNSEVGAKSLGIASFYLRAVCQNRNLWGVEDFEEITIRHSKYAASRFAHQAAPA EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTRFANSSPTPFVNGIRAAREKIVARNDEDRREFLRKRGFSKAETAKIIDTVLAEEGRKP HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH ESVFDFVQGITAVARDKPHQDSRLDLEGKAKKLLDRAA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure TNVQILDGARDGNGGYKVDVGRGQRIGRVSSEWFNRPADERYLSLSDLMASVRGRAERS CCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RTRTVESAAIRVEASRDDAERLDLVLAGADAPVAPTHWSFGQLASIVGAPAAYLRQLPAP HHHHHHHHEEEEECCCCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCC LAGINLQYGLTSHLAEQVKTLEVEDGRVELRAVTGPDYGRIYDHELVAAVQKIAGNGTGD CCCCEEECCHHHHHHHHHHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC TRWKIPGVLDWSTGIYNPRVDITSDTTTLYASDRDVFLFLVDDLNPIEAGRLPDGSPDLY CEEECCCEEECCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEE FRGFYCWNSEVGAKSLGIASFYLRAVCQNRNLWGVEDFEEITIRHSKYAASRFAHQAAPA EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTRFANSSPTPFVNGIRAAREKIVARNDEDRREFLRKRGFSKAETAKIIDTVLAEEGRKP HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH ESVFDFVQGITAVARDKPHQDSRLDLEGKAKKLLDRAA HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA