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The map label for this gene is traG [H]

Identifier: 110634672

GI number: 110634672

Start: 2479887

End: 2481875

Strand: Reverse

Name: traG [H]

Synonym: Meso_2327

Alternate gene names: 110634672

Gene position: 2481875-2479887 (Counterclockwise)

Preceding gene: 110634673

Following gene: 110634671

Centisome position: 56.25

GC content: 64.35

Gene sequence:

>1989_bases
ATGCAGGGCGGTCGCGTCCTCTGGGGTCAAATCATCGTCGTCTTGACCATCGTTCTGGTGACGACGTGGGCAGCGACGCA
ATGGACGGCATGGCGGCTCGGGTTTCAGGCGCAGCTCGGGACGCCGTGGTTCCAGCTTGGAGGATGGCCGGTCTACTATC
CGCCCGCCTTCTTCTGGTGGTGGTATTTCTTCGACGCCTATGCGCCTACGATCTTTTATGAAGGCGCCGCCATTGCCGCA
TCGGGCGGCTTCATCGCCATCGCGGTCGCCATTCTCATGTCGATCATCCGCGCACGCGAGGCGAAGAACGTCGCTACCTA
TGGCTCCGCCCGCTGGGCCGAGGATGAAGAAATCCGCGCCGCCGGCCTGCTCGGTCCGGATGGCGTTGTGCTCGGCAGGC
ATAGCCGACATTATATTCGTCACGACGGACCTGAGCATGTCCTGTGCTTCGCCCCCACGCGATCGGGCAAGGGCGTGGGC
CTCGTCTTGCCGACGCTGCTCACCTGGCCGGGAAGCTGCATCGTCCACGACATCAAGGGCGAGAACTGGACGCTGACGGC
CGGCTTCCGTGCCCGGCATGGCCGGGTTCTGCTGTTCGACCCGACGAACGCGCAGTCTTCAGCCTACAACCCGCTGCTGG
AGGTGCGGCGCGGCGAATGGGAAGTGCGCGATGTGCAGAACATCGCTGACATCCTCGTCGATCCCGAGGGAAGCCTCGAC
AAGCGAAATCACTGGGAGAAAACCAGCCACACCCTCCTGGTCGGTGCGATCCTGCATGTTCTTTATGCCGAGCCCGACAA
GACGCTCGCCGGCGTTGCCAACTTCCTCTCCGATCCGCGCCGCCCTGTCGAGGCGACGCTGCGCGCCATGATGTCGACAC
CGCATCTGGGCGAGGCGGGCGTTCATCCCGTCGTCGCCTCGGCCGCACGGGAGCTGCTCAACAAGTCGGAGAACGAGAGA
AGCGGCGTGCTCTCGACCGCTATGTCCTTCCTCGGGCTCTATCGAGATCCGGTCGTGGCGAAGGTGACGGCGCGCTGTGA
CTGGCGCATTGCCGATCTGGTCGTATTCCGGCGGCCGGTCAGCCTCTACCTTGTCGTGCCGCCTTCCGACATCAACCGGA
CCAAGCCACTGATTCGCTTGATCCTGAATCAGATCGGCCGTCGTCTGACAGAGGAACTCGGGGCTTCGGGCACGCGGCAT
CGGCTGCTGCTGATGCTGGACGAGTTTTCCGCACTCGGCCGCCTCGACTTTTTCGAATCCGCTCTGGCCTTCATGGCCGG
CTATGGCCTCAAGAGCTTCCTGATCGCGCAGAGCCTAAACCAGATCGAACGGGCCTATGGACCCAACAATTCGATCCTCG
ACAACTGCCATGTGCGCGTCGCCTTCGCGACCAACGACGAGCGCACCGCGAAGCGGGTGTCCGACTCGCTCGGCACTGCC
ACCGAACTGCGGGCGATGAGCAACTACGCCGGCCACCGGCTCGCGCCCTGGCTTGGCCACCTGATGATTTCACGACAGGA
AACCGCCCGGCCGCTGCTCACCCCCGGTGAGATCATGCAACTTCCACCTGCCGATGAGATCGTCATGGTGGCCGGCACAC
CGCCGATCCGGGCGAAGAAGGCGCGGTATTTTGAGGACGTGCGCTTCGCGGAACGCGTCCTGCCGCCGCCTGAGTTGGTC
GAGTCTGATTCTGCGGGCGTGACGCAAGCACCCGACGAGTGGTCGAGTCGTGTGGTCCCGTCCGGGTCGCAATCCTCTCG
AGATCGCGGTGATATCGTTGCGGATCCCGCCAACGCCGGCATTCGCCGCGAGCCGGAATTGCCCGAGCAAGAGGAGGTCC
TCCCGCCCGAACGACCGGCCGAGCGTGAATTCGACCTGGTGGACGACGAGCCCGATGTCGATGCGGCAAAGGCGCGGGCG
ATGCGGCAACGCATGCGCATGGTGGCCCGCCAGGCCTCGATGGACCCGGCCGATGGCATCGAGCTGTAG

Upstream 100 bases:

>100_bases
CCATGGTATCCGGCAGCACGCCGGATTTTCTTTATCTGTTGCCTCTCGCCGTCACACCCATTCTCTGGTCGGCTCCATCT
CTCTTGCCGAAGGAGCCGGT

Downstream 100 bases:

>100_bases
GAGAACGCCAATGCGGGCCAAGACACGGATGAATGTCTATTTCGACCCGGCATTGCTGAAGCAGGTCGAGGCGCTGGCGC
TGCGGCGCAAGGTCTCCAAG

Product: conjugal transfer coupling protein TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MQGGRVLWGQIIVVLTIVLVTTWAATQWTAWRLGFQAQLGTPWFQLGGWPVYYPPAFFWWWYFFDAYAPTIFYEGAAIAA
SGGFIAIAVAILMSIIRAREAKNVATYGSARWAEDEEIRAAGLLGPDGVVLGRHSRHYIRHDGPEHVLCFAPTRSGKGVG
LVLPTLLTWPGSCIVHDIKGENWTLTAGFRARHGRVLLFDPTNAQSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLD
KRNHWEKTSHTLLVGAILHVLYAEPDKTLAGVANFLSDPRRPVEATLRAMMSTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVVFRRPVSLYLVVPPSDINRTKPLIRLILNQIGRRLTEELGASGTRH
RLLLMLDEFSALGRLDFFESALAFMAGYGLKSFLIAQSLNQIERAYGPNNSILDNCHVRVAFATNDERTAKRVSDSLGTA
TELRAMSNYAGHRLAPWLGHLMISRQETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKKARYFEDVRFAERVLPPPELV
ESDSAGVTQAPDEWSSRVVPSGSQSSRDRGDIVADPANAGIRREPELPEQEEVLPPERPAEREFDLVDDEPDVDAAKARA
MRQRMRMVARQASMDPADGIEL

Sequences:

>Translated_662_residues
MQGGRVLWGQIIVVLTIVLVTTWAATQWTAWRLGFQAQLGTPWFQLGGWPVYYPPAFFWWWYFFDAYAPTIFYEGAAIAA
SGGFIAIAVAILMSIIRAREAKNVATYGSARWAEDEEIRAAGLLGPDGVVLGRHSRHYIRHDGPEHVLCFAPTRSGKGVG
LVLPTLLTWPGSCIVHDIKGENWTLTAGFRARHGRVLLFDPTNAQSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLD
KRNHWEKTSHTLLVGAILHVLYAEPDKTLAGVANFLSDPRRPVEATLRAMMSTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVVFRRPVSLYLVVPPSDINRTKPLIRLILNQIGRRLTEELGASGTRH
RLLLMLDEFSALGRLDFFESALAFMAGYGLKSFLIAQSLNQIERAYGPNNSILDNCHVRVAFATNDERTAKRVSDSLGTA
TELRAMSNYAGHRLAPWLGHLMISRQETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKKARYFEDVRFAERVLPPPELV
ESDSAGVTQAPDEWSSRVVPSGSQSSRDRGDIVADPANAGIRREPELPEQEEVLPPERPAEREFDLVDDEPDVDAAKARA
MRQRMRMVARQASMDPADGIEL
>Mature_662_residues
MQGGRVLWGQIIVVLTIVLVTTWAATQWTAWRLGFQAQLGTPWFQLGGWPVYYPPAFFWWWYFFDAYAPTIFYEGAAIAA
SGGFIAIAVAILMSIIRAREAKNVATYGSARWAEDEEIRAAGLLGPDGVVLGRHSRHYIRHDGPEHVLCFAPTRSGKGVG
LVLPTLLTWPGSCIVHDIKGENWTLTAGFRARHGRVLLFDPTNAQSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLD
KRNHWEKTSHTLLVGAILHVLYAEPDKTLAGVANFLSDPRRPVEATLRAMMSTPHLGEAGVHPVVASAARELLNKSENER
SGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVVFRRPVSLYLVVPPSDINRTKPLIRLILNQIGRRLTEELGASGTRH
RLLLMLDEFSALGRLDFFESALAFMAGYGLKSFLIAQSLNQIERAYGPNNSILDNCHVRVAFATNDERTAKRVSDSLGTA
TELRAMSNYAGHRLAPWLGHLMISRQETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKKARYFEDVRFAERVLPPPELV
ESDSAGVTQAPDEWSSRVVPSGSQSSRDRGDIVADPANAGIRREPELPEQEEVLPPERPAEREFDLVDDEPDVDAAKARA
MRQRMRMVARQASMDPADGIEL

Specific function: Required for conjugative transfer of plasmid RP4. Binds tightly and specifically to the relaxase traI. Can also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer [H]

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virD4/traG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003688 [H]

Pfam domain/function: PF02534 TraG [H]

EC number: NA

Molecular weight: Translated: 73436; Mature: 73436

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGRVLWGQIIVVLTIVLVTTWAATQWTAWRLGFQAQLGTPWFQLGGWPVYYPPAFFWW
CCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECEEECCCCCHHHHCCCCEECCHHHHHH
WYFFDAYAPTIFYEGAAIAASGGFIAIAVAILMSIIRAREAKNVATYGSARWAEDEEIRA
HHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHE
AGLLGPDGVVLGRHSRHYIRHDGPEHVLCFAPTRSGKGVGLVLPTLLTWPGSCIVHDIKG
ECCCCCCCEEECCCCCCHHCCCCCCEEEEEECCCCCCCCEEHHHHHHHCCCCEEEEEECC
ENWTLTAGFRARHGRVLLFDPTNAQSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLD
CCEEEEECCCCCCCEEEEECCCCCCCHHCCHHHHHHCCCCHHHHHHHHHHHEECCCCCCC
KRNHWEKTSHTLLVGAILHVLYAEPDKTLAGVANFLSDPRRPVEATLRAMMSTPHLGEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
VHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVVFRRPV
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCE
SLYLVVPPSDINRTKPLIRLILNQIGRRLTEELGASGTRHRLLLMLDEFSALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
ALAFMAGYGLKSFLIAQSLNQIERAYGPNNSILDNCHVRVAFATNDERTAKRVSDSLGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCH
TELRAMSNYAGHRLAPWLGHLMISRQETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKK
HHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEECCCCCCEEEEECCCCCCHHH
ARYFEDVRFAERVLPPPELVESDSAGVTQAPDEWSSRVVPSGSQSSRDRGDIVADPANAG
HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCC
IRREPELPEQEEVLPPERPAEREFDLVDDEPDVDAAKARAMRQRMRMVARQASMDPADGI
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
EL
CC
>Mature Secondary Structure
MQGGRVLWGQIIVVLTIVLVTTWAATQWTAWRLGFQAQLGTPWFQLGGWPVYYPPAFFWW
CCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECEEECCCCCHHHHCCCCEECCHHHHHH
WYFFDAYAPTIFYEGAAIAASGGFIAIAVAILMSIIRAREAKNVATYGSARWAEDEEIRA
HHHHHHHCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHE
AGLLGPDGVVLGRHSRHYIRHDGPEHVLCFAPTRSGKGVGLVLPTLLTWPGSCIVHDIKG
ECCCCCCCEEECCCCCCHHCCCCCCEEEEEECCCCCCCCEEHHHHHHHCCCCEEEEEECC
ENWTLTAGFRARHGRVLLFDPTNAQSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLD
CCEEEEECCCCCCCEEEEECCCCCCCHHCCHHHHHHCCCCHHHHHHHHHHHEECCCCCCC
KRNHWEKTSHTLLVGAILHVLYAEPDKTLAGVANFLSDPRRPVEATLRAMMSTPHLGEAG
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC
VHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPVVAKVTARCDWRIADLVVFRRPV
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCE
SLYLVVPPSDINRTKPLIRLILNQIGRRLTEELGASGTRHRLLLMLDEFSALGRLDFFES
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
ALAFMAGYGLKSFLIAQSLNQIERAYGPNNSILDNCHVRVAFATNDERTAKRVSDSLGTA
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCH
TELRAMSNYAGHRLAPWLGHLMISRQETARPLLTPGEIMQLPPADEIVMVAGTPPIRAKK
HHHHHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCEECCCCCCEEEEECCCCCCHHH
ARYFEDVRFAERVLPPPELVESDSAGVTQAPDEWSSRVVPSGSQSSRDRGDIVADPANAG
HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCC
IRREPELPEQEEVLPPERPAEREFDLVDDEPDVDAAKARAMRQRMRMVARQASMDPADGI
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
EL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1665997; 8021214; 11976307 [H]