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The map label for this gene is trbE [H]

Identifier: 110634666

GI number: 110634666

Start: 2474410

End: 2476845

Strand: Reverse

Name: trbE [H]

Synonym: Meso_2321

Alternate gene names: 110634666

Gene position: 2476845-2474410 (Counterclockwise)

Preceding gene: 110634667

Following gene: 110634665

Centisome position: 56.13

GC content: 65.52

Gene sequence:

>2436_bases
ATGAACCTCGCTGAATACCGCCGCACCGCGCGCCGTCTGGCAGATTTCCTGCCTTGGGCGGCGCTCGTCGGCGAGGGCGT
TGTGCTCAACAAGGATGGCAGCTTCCAGCGCACGGCACGGTTTCGCGGTCCTGATCTGGATTCGGCCGTCGCGGCCGAGT
TGGTCGCAGTCGCCAGTCGTCTCAACAACGTCTTTCGCCGTCTCGGGTCGGGCTGGGCGATCTTCGTCGAGGCACAGCGG
CACGAGGCCGCGACCTATCCAGAGAGCCGATTTCCGGATGCCGCGTCGGCGTTGGTCGATGCCGAGCGCAAGGCTGATTT
CGAGGAAGCCGGCGCGCACTACGAGTCGAGCTACTTCCTGACGTTTCTCTATCTGCCGCCGGCCGAGGATGCCGCCCGTG
CAGAAAGCTGGCTTTACGAGGGCCGCGAGCAAACGGGCGTCAATCCGCATGAGAGTCTTGCAGCCTTCGTCGACCGCACC
GACCGCGTGCTGGCATTGCTCGACGGTTTCATGCCGGCGTGCCGCTGGCTCGACGACAGCGAGACGCTGACCTTTCTGCA
TTCGACCATCTCGACCAGGCGCCATCGCGTGCGCGTGCCCGAGACGCCGATGTATCTCGACGCGCTGCTCGCTGATCAGC
CGCTGACCGGCGGGCTGGAGCCGCGCCTTGGCGATCAGCATCTGCGAATCCTTACCATCGTCGGCTTTCCGACCGCGACC
ACACCCGGCATCCTCGACGAGCTGAACCGGCTGGCGTTCCCATATCGGTGGTCGACACGGGCGATCCTGCTCGACAAGGT
CGACGCGACAAAGCTGCTCACGAAGATCAGGCGGCAGTGGTTCGCCAAGCGCAAATCGATCGCCGCGATCCTCAAGGAGG
TGATGACCAACGAGGCCTCCGCGCTGGTTGATACCGATGCGGCCAACAAGGCGGCGGATGCCGACATGGCCCTGCAGGAG
TTGGGCGCCGACTATGCCGGGCAAGCCTACGTCACGGCCACCGTCACCGTCTGGGACGGCGACCCGCGCATCGCCGACGA
GAAATTGCGGCTGGTGGAGAAGGTCATCCAGGGCCGCGACTTCACCGCGATGCCCGAGACCATCAACGCGGTCGATGCGT
GGCTCGGCTCGCTGCCGGGACACGTCTACGCCAACGTCCGGCAGCCCCCGGTCTCGACGCTCAATCTCGCCCACATGATC
CCCCTGAGTGCCGTGTGGGCGGGGCCGGAACGGGACGAGCATTTCGGTGCTCCCCCCTTGCTCTACGGCAAGACCGAAGG
CTCGACCACGTTCCGGCTTTCCCTGCATGTCGGCGACGTAGGGCACACCCTCGTCGTCGGTCCGACCGGCGCCGGGAAGT
CGGTGCTGCTCGCGCTCATGGCGCTTCAGTTCCGCCGCTACGCAGGAAGCCAGATCTTCGCTTTCGATTTCGGGGGATCG
ATCCGCGCCGCCGCGCTCGCCATGGGCGGGAACTGGCACGATCTCGGCGGCGGTCTCAGCGAGGGCACGGAGACGTCCGT
TTCTCTCCAGCCGCTCGCCCGCATCCACTACACGTCTGAGCGTGCCTGGGCCGCCGACTGGATCGTTGCGATCCTCATGC
GCGAGGGCGTTTCGATCACTCCCGAGGTCAAGGAACATCTTTGGGCGGCATTGACCTCGCTGGCGTCCGCGCCGCTCGAT
GAGCGCACCATCACCGGCCTCGCGGTGCTGCTGCAATCCAACGATCTCAAGCAGGCGCTACGGCCCTATTGCGTCGGCGG
TCCCTACGGCCGGCTGCTCGACGCGGAGTCCGAGCATCTCGGCAGCGCGACTGTTCAGGCGTTCGAGACCGAGGGGCTGA
TCGGCACCGGCGCGGCGCCGGCCGTGCTCTCCTATCTCTTCCACCGCATCGGCGACCGGCTCGACGGAAGTCCGACGCTG
CTGATCGTGGACGAGGGATGGCTGGCGCTCGACGATGAGGGCTTCGCCGGCCAGCTTCGCGAATGGCTGAAGACGCTCCG
CAAGAAGAACGCTTCCGTCGTCTTCGCCACGCAATCGCTCAGCGACATTGACGACAGCAAGATCGCGCCGGCGATCATCG
AGAGCTGCCCGACCCGACTGCTGCTGCCGAACGAACGCGCCATCGAACCGCAGATTACCGCCATCTACAGACGCTTCGGC
CTCAATGGCCGACAGATTGAAATCCTCGCTCGGGCGACACCGAAACGGGACTATTACTGCCAGTCCCGCCGCGGCAACCG
GCTGTTCGAGCTGGGCCTTTCCGAAGTCGCGCTGGCGCTCTGCGCAGCATCATCAAAAGCCGATCAAACCGCCATCCAGG
CGATCCTGGCTGAAAATGGCCGTGACGGCTTCCTCGCCGCGTGGCTGCGCGCCCGCGATGTCGCCTGGGCCACCGACCTC
ATTCCCGACCTCACCAACCTAGAGACCAAACCATGA

Upstream 100 bases:

>100_bases
CTGCCGTCTGGGCGGCGAGGCGTGACCCGCTCTTCGTGGAAGTCGGTCGTCGCCATCTGCGCATCCCCGGTCATCTCACG
GTCTAAGGGTCAGCGTTGTG

Downstream 100 bases:

>100_bases
TGACCAGTCGCTCTCGCGCGGCGCTTCTCGCCGTGTCCATCCTGTCTCTCCCAATGGCGTTCTCGCCGATGCTGCTGGCA
CCTGCCCACGCCTGGAGGAT

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 811; Mature: 811

Protein sequence:

>811_residues
MNLAEYRRTARRLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVASRLNNVFRRLGSGWAIFVEAQR
HEAATYPESRFPDAASALVDAERKADFEEAGAHYESSYFLTFLYLPPAEDAARAESWLYEGREQTGVNPHESLAAFVDRT
DRVLALLDGFMPACRWLDDSETLTFLHSTISTRRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRILTIVGFPTAT
TPGILDELNRLAFPYRWSTRAILLDKVDATKLLTKIRRQWFAKRKSIAAILKEVMTNEASALVDTDAANKAADADMALQE
LGADYAGQAYVTATVTVWDGDPRIADEKLRLVEKVIQGRDFTAMPETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMI
PLSAVWAGPERDEHFGAPPLLYGKTEGSTTFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQIFAFDFGGS
IRAAALAMGGNWHDLGGGLSEGTETSVSLQPLARIHYTSERAWAADWIVAILMREGVSITPEVKEHLWAALTSLASAPLD
ERTITGLAVLLQSNDLKQALRPYCVGGPYGRLLDAESEHLGSATVQAFETEGLIGTGAAPAVLSYLFHRIGDRLDGSPTL
LIVDEGWLALDDEGFAGQLREWLKTLRKKNASVVFATQSLSDIDDSKIAPAIIESCPTRLLLPNERAIEPQITAIYRRFG
LNGRQIEILARATPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQTAIQAILAENGRDGFLAAWLRARDVAWATDL
IPDLTNLETKP

Sequences:

>Translated_811_residues
MNLAEYRRTARRLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVASRLNNVFRRLGSGWAIFVEAQR
HEAATYPESRFPDAASALVDAERKADFEEAGAHYESSYFLTFLYLPPAEDAARAESWLYEGREQTGVNPHESLAAFVDRT
DRVLALLDGFMPACRWLDDSETLTFLHSTISTRRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRILTIVGFPTAT
TPGILDELNRLAFPYRWSTRAILLDKVDATKLLTKIRRQWFAKRKSIAAILKEVMTNEASALVDTDAANKAADADMALQE
LGADYAGQAYVTATVTVWDGDPRIADEKLRLVEKVIQGRDFTAMPETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMI
PLSAVWAGPERDEHFGAPPLLYGKTEGSTTFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQIFAFDFGGS
IRAAALAMGGNWHDLGGGLSEGTETSVSLQPLARIHYTSERAWAADWIVAILMREGVSITPEVKEHLWAALTSLASAPLD
ERTITGLAVLLQSNDLKQALRPYCVGGPYGRLLDAESEHLGSATVQAFETEGLIGTGAAPAVLSYLFHRIGDRLDGSPTL
LIVDEGWLALDDEGFAGQLREWLKTLRKKNASVVFATQSLSDIDDSKIAPAIIESCPTRLLLPNERAIEPQITAIYRRFG
LNGRQIEILARATPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQTAIQAILAENGRDGFLAAWLRARDVAWATDL
IPDLTNLETKP
>Mature_811_residues
MNLAEYRRTARRLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVASRLNNVFRRLGSGWAIFVEAQR
HEAATYPESRFPDAASALVDAERKADFEEAGAHYESSYFLTFLYLPPAEDAARAESWLYEGREQTGVNPHESLAAFVDRT
DRVLALLDGFMPACRWLDDSETLTFLHSTISTRRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRILTIVGFPTAT
TPGILDELNRLAFPYRWSTRAILLDKVDATKLLTKIRRQWFAKRKSIAAILKEVMTNEASALVDTDAANKAADADMALQE
LGADYAGQAYVTATVTVWDGDPRIADEKLRLVEKVIQGRDFTAMPETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMI
PLSAVWAGPERDEHFGAPPLLYGKTEGSTTFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQIFAFDFGGS
IRAAALAMGGNWHDLGGGLSEGTETSVSLQPLARIHYTSERAWAADWIVAILMREGVSITPEVKEHLWAALTSLASAPLD
ERTITGLAVLLQSNDLKQALRPYCVGGPYGRLLDAESEHLGSATVQAFETEGLIGTGAAPAVLSYLFHRIGDRLDGSPTL
LIVDEGWLALDDEGFAGQLREWLKTLRKKNASVVFATQSLSDIDDSKIAPAIIESCPTRLLLPNERAIEPQITAIYRRFG
LNGRQIEILARATPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQTAIQAILAENGRDGFLAAWLRARDVAWATDL
IPDLTNLETKP

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 88822; Mature: 88822

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAEYRRTARRLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVASR
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
LNNVFRRLGSGWAIFVEAQRHEAATYPESRFPDAASALVDAERKADFEEAGAHYESSYFL
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEEE
TFLYLPPAEDAARAESWLYEGREQTGVNPHESLAAFVDRTDRVLALLDGFMPACRWLDDS
EEEEECCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ETLTFLHSTISTRRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRILTIVGFPTAT
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
TPGILDELNRLAFPYRWSTRAILLDKVDATKLLTKIRRQWFAKRKSIAAILKEVMTNEAS
CCHHHHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ALVDTDAANKAADADMALQELGADYAGQAYVTATVTVWDGDPRIADEKLRLVEKVIQGRD
HEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCC
FTAMPETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPERDEHFGAPPL
CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCE
LYGKTEGSTTFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQIFAFDFGGS
EEECCCCCEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
IRAAALAMGGNWHDLGGGLSEGTETSVSLQPLARIHYTSERAWAADWIVAILMREGVSIT
CEEHHEEECCCCHHCCCCCCCCCCCCEEHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCC
PEVKEHLWAALTSLASAPLDERTITGLAVLLQSNDLKQALRPYCVGGPYGRLLDAESEHL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCEECCCCCHHHCCCCHHHC
GSATVQAFETEGLIGTGAAPAVLSYLFHRIGDRLDGSPTLLIVDEGWLALDDEGFAGQLR
CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHHHH
EWLKTLRKKNASVVFATQSLSDIDDSKIAPAIIESCPTRLLLPNERAIEPQITAIYRRFG
HHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHC
LNGRQIEILARATPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQTAIQAILAENG
CCCCEEEEEEECCCCCCCEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RDGFLAAWLRARDVAWATDLIPDLTNLETKP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNLAEYRRTARRLADFLPWAALVGEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVASR
CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
LNNVFRRLGSGWAIFVEAQRHEAATYPESRFPDAASALVDAERKADFEEAGAHYESSYFL
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEEE
TFLYLPPAEDAARAESWLYEGREQTGVNPHESLAAFVDRTDRVLALLDGFMPACRWLDDS
EEEEECCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ETLTFLHSTISTRRHRVRVPETPMYLDALLADQPLTGGLEPRLGDQHLRILTIVGFPTAT
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
TPGILDELNRLAFPYRWSTRAILLDKVDATKLLTKIRRQWFAKRKSIAAILKEVMTNEAS
CCHHHHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ALVDTDAANKAADADMALQELGADYAGQAYVTATVTVWDGDPRIADEKLRLVEKVIQGRD
HEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCC
FTAMPETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPERDEHFGAPPL
CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCE
LYGKTEGSTTFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQFRRYAGSQIFAFDFGGS
EEECCCCCEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCC
IRAAALAMGGNWHDLGGGLSEGTETSVSLQPLARIHYTSERAWAADWIVAILMREGVSIT
CEEHHEEECCCCHHCCCCCCCCCCCCEEHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCC
PEVKEHLWAALTSLASAPLDERTITGLAVLLQSNDLKQALRPYCVGGPYGRLLDAESEHL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCEECCCCCHHHCCCCHHHC
GSATVQAFETEGLIGTGAAPAVLSYLFHRIGDRLDGSPTLLIVDEGWLALDDEGFAGQLR
CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCHHHHH
EWLKTLRKKNASVVFATQSLSDIDDSKIAPAIIESCPTRLLLPNERAIEPQITAIYRRFG
HHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHC
LNGRQIEILARATPKRDYYCQSRRGNRLFELGLSEVALALCAASSKADQTAIQAILAENG
CCCCEEEEEEECCCCCCCEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
RDGFLAAWLRARDVAWATDLIPDLTNLETKP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]