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The map label for this gene is ycjN [C]

Identifier: 110634650

GI number: 110634650

Start: 2460094

End: 2461473

Strand: Reverse

Name: ycjN [C]

Synonym: Meso_2305

Alternate gene names: 110634650

Gene position: 2461473-2460094 (Counterclockwise)

Preceding gene: 110634652

Following gene: 110634649

Centisome position: 55.78

GC content: 57.46

Gene sequence:

>1380_bases
ATGCGTGCGAATTTATATGAGCTGTGCACTGGACGCACAAGTAGGTTGGCGTTAAATATCCATGGCGGCCCTCGGTCGAT
AGAGATCGCAGACGTATTAGGGGAGAGAGACATGAAGCTGACTGGGCTTAAAGCTGCATTGCTGGCATTTGCTAGCACGT
GCTTCGCAACCGCTGGCAATGCAGGGACTGTCACTATGTGGACATTCCTCAATCCGGCTAACGATTCGGGCCGCGAAATC
GCTTTGCGCAATATCATTGCAGAATTCGAAACGAAGAATCCGGCGATAAAGATCGTTGTAGAGCCCCAGGACTGGGGGAC
CATGTCCCAGAAGTTCGTGCTGAGCCACACTGCGAATCGCGCGCCGGACGTCATCTGGAGCGCGCAAGATACGGGGCTTC
TCGTCAATTCGGGTTCATTGGCGTCGCTGAATCCGTACCTGGACGGCTGGGATGGACCGACTGGAGGCGATCTGCTTTTC
GCCTCGGCCTATGAAAAGGCTACCTACAATGGCGAACTGATGGCGGTTCCTATCTTTCCGTATGCGATCCTGATGTTCTA
TCGGAAAGACGTGCTCGCGGAGCTTGGCATCTCCGAAGAGTCTTTGCGCACGTGGGACGGATTGAAGAATGTCACTCGCA
AGCTGCAGGAAGCGGGCAAGCCGGGCCTGCTGATGCCGACTTCGGAGGACCGCAGCAGTAGCAGTGTGGCAACCACCGCC
TTCATGGAACTGACCGGAGGCCATCTGGTTGGCGCCGATTGCCGCGCGAACTTCGCTACGCCCGAGGGCATAAAGGCGCT
TGAACTGCAGGTTGATATGTTTCGAGAAGGCCTTCTGGCGCGCGAGGAAGTCTCCCGAAACAATGACGACGATTGGGACC
TGTTCATTGGCGGGCGTGGTACGATCGTTCCCCAGACCAGCGCGCGTGCCGGCGCATTGCTTTCTTCAGCAGAGTGGGCC
GACGAAAAAACCGTTGGCATTATGCCCTGGCCAAGCTTCACTGGCGAAGAGCCAGGACCGGCATCCGGAGCGACTTGGTC
GGCCTCCTTGTGGGCGGGATCTCAGAACAAGGAAGAAGCCGCCAAGTTCATTCTTCACCTCGTGAGCGTGGAAGCAGCTA
CGGAGTGGACGCGCCATGGGCAGCAATTGCCGCTCCGTCGCTCTGTTGCCGAGAACCCGGAGTTCAGCGGCGGAATTTAT
GAGCTCAACAAGACCGTGGCATCGATCATGGATTCGACGGCGGTGTTCGCGCCGCCTGGATGTGCGGTTTCTCAGTCCTA
CTCGGATTGGAATGCGGCGGTTCAGGAGGTATTCCTCGGCGGGATCGATCCGCTCGCCGCATTGAAAGAAGCAGAAGCGG
CCACCAATCGGCGCCAATAA

Upstream 100 bases:

>100_bases
CGGAATCGCTGAGAATTGCATGCGCCTGTCTCCCTTGATGATGCGCCGCATCACGCTGCGGCGAGTTTCATATTTTTGCC
GTTGGAATTCCCTTCCAAGG

Downstream 100 bases:

>100_bases
CTGTAATGTTGTAGCCGGGCCCTCGTGGCTCGACCATCTAGGGACACCGCCTGTGACAAATACCTCTCTCGCCGAGAGCG
GATTCGAGCGCTCACCCCGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter; Sugar ABC Transporter Periplasmic Component; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator; Sugar Transporter

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MRANLYELCTGRTSRLALNIHGGPRSIEIADVLGERDMKLTGLKAALLAFASTCFATAGNAGTVTMWTFLNPANDSGREI
ALRNIIAEFETKNPAIKIVVEPQDWGTMSQKFVLSHTANRAPDVIWSAQDTGLLVNSGSLASLNPYLDGWDGPTGGDLLF
ASAYEKATYNGELMAVPIFPYAILMFYRKDVLAELGISEESLRTWDGLKNVTRKLQEAGKPGLLMPTSEDRSSSSVATTA
FMELTGGHLVGADCRANFATPEGIKALELQVDMFREGLLAREEVSRNNDDDWDLFIGGRGTIVPQTSARAGALLSSAEWA
DEKTVGIMPWPSFTGEEPGPASGATWSASLWAGSQNKEEAAKFILHLVSVEAATEWTRHGQQLPLRRSVAENPEFSGGIY
ELNKTVASIMDSTAVFAPPGCAVSQSYSDWNAAVQEVFLGGIDPLAALKEAEAATNRRQ

Sequences:

>Translated_459_residues
MRANLYELCTGRTSRLALNIHGGPRSIEIADVLGERDMKLTGLKAALLAFASTCFATAGNAGTVTMWTFLNPANDSGREI
ALRNIIAEFETKNPAIKIVVEPQDWGTMSQKFVLSHTANRAPDVIWSAQDTGLLVNSGSLASLNPYLDGWDGPTGGDLLF
ASAYEKATYNGELMAVPIFPYAILMFYRKDVLAELGISEESLRTWDGLKNVTRKLQEAGKPGLLMPTSEDRSSSSVATTA
FMELTGGHLVGADCRANFATPEGIKALELQVDMFREGLLAREEVSRNNDDDWDLFIGGRGTIVPQTSARAGALLSSAEWA
DEKTVGIMPWPSFTGEEPGPASGATWSASLWAGSQNKEEAAKFILHLVSVEAATEWTRHGQQLPLRRSVAENPEFSGGIY
ELNKTVASIMDSTAVFAPPGCAVSQSYSDWNAAVQEVFLGGIDPLAALKEAEAATNRRQ
>Mature_459_residues
MRANLYELCTGRTSRLALNIHGGPRSIEIADVLGERDMKLTGLKAALLAFASTCFATAGNAGTVTMWTFLNPANDSGREI
ALRNIIAEFETKNPAIKIVVEPQDWGTMSQKFVLSHTANRAPDVIWSAQDTGLLVNSGSLASLNPYLDGWDGPTGGDLLF
ASAYEKATYNGELMAVPIFPYAILMFYRKDVLAELGISEESLRTWDGLKNVTRKLQEAGKPGLLMPTSEDRSSSSVATTA
FMELTGGHLVGADCRANFATPEGIKALELQVDMFREGLLAREEVSRNNDDDWDLFIGGRGTIVPQTSARAGALLSSAEWA
DEKTVGIMPWPSFTGEEPGPASGATWSASLWAGSQNKEEAAKFILHLVSVEAATEWTRHGQQLPLRRSVAENPEFSGGIY
ELNKTVASIMDSTAVFAPPGCAVSQSYSDWNAAVQEVFLGGIDPLAALKEAEAATNRRQ

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787569, Length=368, Percent_Identity=22.554347826087, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49486; Mature: 49486

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRANLYELCTGRTSRLALNIHGGPRSIEIADVLGERDMKLTGLKAALLAFASTCFATAGN
CCCCHHHHHCCCCEEEEEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
AGTVTMWTFLNPANDSGREIALRNIIAEFETKNPAIKIVVEPQDWGTMSQKFVLSHTANR
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
APDVIWSAQDTGLLVNSGSLASLNPYLDGWDGPTGGDLLFASAYEKATYNGELMAVPIFP
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEHHH
YAILMFYRKDVLAELGISEESLRTWDGLKNVTRKLQEAGKPGLLMPTSEDRSSSSVATTA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
FMELTGGHLVGADCRANFATPEGIKALELQVDMFREGLLAREEVSRNNDDDWDLFIGGRG
HEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TIVPQTSARAGALLSSAEWADEKTVGIMPWPSFTGEEPGPASGATWSASLWAGSQNKEEA
EEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
AKFILHLVSVEAATEWTRHGQQLPLRRSVAENPEFSGGIYELNKTVASIMDSTAVFAPPG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCC
CAVSQSYSDWNAAVQEVFLGGIDPLAALKEAEAATNRRQ
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRANLYELCTGRTSRLALNIHGGPRSIEIADVLGERDMKLTGLKAALLAFASTCFATAGN
CCCCHHHHHCCCCEEEEEEECCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
AGTVTMWTFLNPANDSGREIALRNIIAEFETKNPAIKIVVEPQDWGTMSQKFVLSHTANR
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
APDVIWSAQDTGLLVNSGSLASLNPYLDGWDGPTGGDLLFASAYEKATYNGELMAVPIFP
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEHHH
YAILMFYRKDVLAELGISEESLRTWDGLKNVTRKLQEAGKPGLLMPTSEDRSSSSVATTA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH
FMELTGGHLVGADCRANFATPEGIKALELQVDMFREGLLAREEVSRNNDDDWDLFIGGRG
HEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
TIVPQTSARAGALLSSAEWADEKTVGIMPWPSFTGEEPGPASGATWSASLWAGSQNKEEA
EEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHH
AKFILHLVSVEAATEWTRHGQQLPLRRSVAENPEFSGGIYELNKTVASIMDSTAVFAPPG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCC
CAVSQSYSDWNAAVQEVFLGGIDPLAALKEAEAATNRRQ
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA