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The map label for this gene is yurM [H]

Identifier: 110634648

GI number: 110634648

Start: 2458292

End: 2459119

Strand: Reverse

Name: yurM [H]

Synonym: Meso_2303

Alternate gene names: 110634648

Gene position: 2459119-2458292 (Counterclockwise)

Preceding gene: 110634649

Following gene: 110634647

Centisome position: 55.73

GC content: 54.35

Gene sequence:

>828_bases
ATGTCAAGATCACTAACCTACAGGCTGATCAACATCGCTGTCTCCGGCGTCGTGGGGCTAATCATCCTTTTTCCAATCCT
TTGGGGCTTCGCCACCTCTCTCAAGGAGACCGCGCGAATCTTGGTAGTTCCACCGGATATCATTCCTAATCCGCCGACGC
TCGAGCACTATGCCTCGGTCTTCGAGCGAGGACTTGGCCGTTACGTGTTAAATACGGTCATCGTTTCGGCAGCCACCGTG
CTCTTGTGCATCGGACTCGGATTCCTGGCCGGCTATGCGCTTGCCCGGCTGAATTTTCCCGGGAAGCGAGCGCTTTCGGT
CTCTATCATCGTGCTGATGAGCATCCCGCTCGCCTCGCTGCTCGTGCCGACCTTCGTCTTGTTATCCTATATCGGGCTGC
TCGATACTCGTACGGGCCTCGTCCTACTTTATACAGCATATGAACTTCCGTTGACTGTCTGGCTCATCGCAAACTACATC
CGCAGTATCCCGGAATCCTATGAGCATGCTGCGATGATGGACGGCTATTCCCGGATAAGCGTTATTAGGAAAATAACGTT
GCCGCTGGCCATGCCGGTCCTGGTTGCGGCCGGCCTATTCACCTTGACCTTCGCTTGGAACGATTTTGTCGTTGCAGTGA
CCATGAATGCCACAGAAGCGCTGCGGACGCTGCCTGTCGGTATCTACAACTATCTTGGCATATTCAGTCGGGAATGGGGG
CCGCTAACAGCTTCTGCAATGATCTCGATCATACCCGTAGTCGCCGTCTTCGTTTTCTTCCAACGTTACTTCCTCTCCGG
GCTGACTGGCGGCGGAATCAAAGGATAG

Upstream 100 bases:

>100_bases
TTGGGACTGGGCAACGCGATGTCCTTCGTGCTGTTCCTGTTCAACCTGGCACTCATCGGCGTGCTGATCGTCCTCTTCCG
CACCTCTCGGAGAGTATAGA

Downstream 100 bases:

>100_bases
GTGCTCAGAAATGGATGTCGTATATAGTGGTGTCAGCAAGAATTTCGGTCAAGTTACCGCTCTCGACAACTTGAATCTGT
CGATTAAGGCTGGCGAATTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSRSLTYRLINIAVSGVVGLIILFPILWGFATSLKETARILVVPPDIIPNPPTLEHYASVFERGLGRYVLNTVIVSAATV
LLCIGLGFLAGYALARLNFPGKRALSVSIIVLMSIPLASLLVPTFVLLSYIGLLDTRTGLVLLYTAYELPLTVWLIANYI
RSIPESYEHAAMMDGYSRISVIRKITLPLAMPVLVAAGLFTLTFAWNDFVVAVTMNATEALRTLPVGIYNYLGIFSREWG
PLTASAMISIIPVVAVFVFFQRYFLSGLTGGGIKG

Sequences:

>Translated_275_residues
MSRSLTYRLINIAVSGVVGLIILFPILWGFATSLKETARILVVPPDIIPNPPTLEHYASVFERGLGRYVLNTVIVSAATV
LLCIGLGFLAGYALARLNFPGKRALSVSIIVLMSIPLASLLVPTFVLLSYIGLLDTRTGLVLLYTAYELPLTVWLIANYI
RSIPESYEHAAMMDGYSRISVIRKITLPLAMPVLVAAGLFTLTFAWNDFVVAVTMNATEALRTLPVGIYNYLGIFSREWG
PLTASAMISIIPVVAVFVFFQRYFLSGLTGGGIKG
>Mature_274_residues
SRSLTYRLINIAVSGVVGLIILFPILWGFATSLKETARILVVPPDIIPNPPTLEHYASVFERGLGRYVLNTVIVSAATVL
LCIGLGFLAGYALARLNFPGKRALSVSIIVLMSIPLASLLVPTFVLLSYIGLLDTRTGLVLLYTAYELPLTVWLIANYIR
SIPESYEHAAMMDGYSRISVIRKITLPLAMPVLVAAGLFTLTFAWNDFVVAVTMNATEALRTLPVGIYNYLGIFSREWGP
LTASAMISIIPVVAVFVFFQRYFLSGLTGGGIKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=259, Percent_Identity=32.8185328185328, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1790464, Length=274, Percent_Identity=28.8321167883212, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1789860, Length=260, Percent_Identity=23.4615384615385, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29950; Mature: 29819

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50928 ABC_TM1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLTYRLINIAVSGVVGLIILFPILWGFATSLKETARILVVPPDIIPNPPTLEHYASV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHH
FERGLGRYVLNTVIVSAATVLLCIGLGFLAGYALARLNFPGKRALSVSIIVLMSIPLASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LVPTFVLLSYIGLLDTRTGLVLLYTAYELPLTVWLIANYIRSIPESYEHAAMMDGYSRIS
HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRKITLPLAMPVLVAAGLFTLTFAWNDFVVAVTMNATEALRTLPVGIYNYLGIFSREWG
HHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
PLTASAMISIIPVVAVFVFFQRYFLSGLTGGGIKG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SRSLTYRLINIAVSGVVGLIILFPILWGFATSLKETARILVVPPDIIPNPPTLEHYASV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHH
FERGLGRYVLNTVIVSAATVLLCIGLGFLAGYALARLNFPGKRALSVSIIVLMSIPLASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LVPTFVLLSYIGLLDTRTGLVLLYTAYELPLTVWLIANYIRSIPESYEHAAMMDGYSRIS
HHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRKITLPLAMPVLVAAGLFTLTFAWNDFVVAVTMNATEALRTLPVGIYNYLGIFSREWG
HHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
PLTASAMISIIPVVAVFVFFQRYFLSGLTGGGIKG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]