| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is malE [C]
Identifier: 110634642
GI number: 110634642
Start: 2449770
End: 2451038
Strand: Reverse
Name: malE [C]
Synonym: Meso_2297
Alternate gene names: 110634642
Gene position: 2451038-2449770 (Counterclockwise)
Preceding gene: 110634643
Following gene: 110634641
Centisome position: 55.55
GC content: 53.9
Gene sequence:
>1269_bases ATGAAGAAGCTGCTGCTCTGGGCTGCCGCAACGGCACTGTCGAGCCTCACACTCACTGCCGAGCTACACGCCGGCACGGT GAAAATGTGGACCTTCCTCAACCCTAACAACAATTCGGGCCTTGAAGTGGCCTTGCGCAATATCGTTACAGAGTTCGAGA AGGAGAACCCGCAAATCGATGTCGTTGTGGAACCCCAAGCCTGGGCGACGATGTCCGAAAAATTCGTGCTCAGCCACAGC ACGAACACAGCACCTGATATCATCTGGAGCGCAAAGAATCTGGGCTTACTGGTCAATTCGGGATCTCTGGCCCCGCTCAA TCCCTATTTGGGTGGCTGGGACGGTCCAGAGGGGGGAGATTTGCTGTTTAAGAAAGCTTATGAAAACGCAACGTATGACG GCAATCTGATGGCTGTCCCAATATTTGCGTACGCCGTGTTACTCTTTTACCGAAAGGATATATTTGAAGAACTCGGATTG ACTGAAGAGTCGATCGCGACATGGGACGGGTTAATCGAAACCGCTCGGAAACTGAAGGCTGCGGGAAAGCCCGGCTTGCT TGTTCCGACGTCGGTCGATAAGCCGAGTGAGGGAGTAGCGGCAGATGCCTACGTCCAGCTCAATGGCGGCCAAATGTTCG ACGAAGGTTGTGTTGCAAACTTTGCCAGCGAGAACGGGCTAAGAGCGTTGGAGCTGCAGGTCCGTATGTTCAAGGAAGGG ATTCTGTCTCAGGAGGATCTCGTTCGCAACAATGACGATGACTGGGACTTATTCAAGGGTGGCCGTGGCGCCATTATTCC TCAGGTGAACGACCGGGCGGGTGCTCTCTTCGCATCGACTGACTGGGCCAACGAGAAAACGGTTGGAATCACCCGGTGGC CCAATTTCCCTGGAGAGACTGAGGGGTCGGCAGTCGGCGCAGCATGGCAAGCATCGCTGTGGACTGGCTCGCAAAATAAA GAAGAGGCTGCAAAGTTCATCCTTTTCATGGTCAGTAAGTTTGCTGCTCGCCAGTGGGCGCGAGAAGGCAAGTTGCTCCC AATCCGCGCATCAATCGCTACGGACCCGGAATTCTCGGGCGGAATCTATGAGTTCAACAAAAAAGCGGGCAAGCTTGTGG AAGAAACCGGTGTGTTTCAACGGCCTGGATGTAACTTCTCTCCGGCGGTCGTTGGCTGGAATACGGCGGTCCAGGAAGTT GTGCTGAATAATGCAGACCCTATGGAGGTTCTGAAGAAAGTTTCGGCGGATGTGAATCGTCGGCAATGA
Upstream 100 bases:
>100_bases AACGAAAAGGTGGTAGGGCTGTTGTTGTGCGTTGGGAGGCATGCAACAAGCGGGCATGCGGCGCCGGTTAATATCTTACG ACTAAGGGATGGAGTTCAGG
Downstream 100 bases:
>100_bases GCAAGGCTGGTATGCACAGGACCGAGGAGCGCACGCCGGTGCGCTCCTTCATTTGTTTGCGACTGTGTTCTAAGCTAATG GACTCGTTTTTTTAATAGGG
Product: extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKKLLLWAAATALSSLTLTAELHAGTVKMWTFLNPNNNSGLEVALRNIVTEFEKENPQIDVVVEPQAWATMSEKFVLSHS TNTAPDIIWSAKNLGLLVNSGSLAPLNPYLGGWDGPEGGDLLFKKAYENATYDGNLMAVPIFAYAVLLFYRKDIFEELGL TEESIATWDGLIETARKLKAAGKPGLLVPTSVDKPSEGVAADAYVQLNGGQMFDEGCVANFASENGLRALELQVRMFKEG ILSQEDLVRNNDDDWDLFKGGRGAIIPQVNDRAGALFASTDWANEKTVGITRWPNFPGETEGSAVGAAWQASLWTGSQNK EEAAKFILFMVSKFAARQWAREGKLLPIRASIATDPEFSGGIYEFNKKAGKLVEETGVFQRPGCNFSPAVVGWNTAVQEV VLNNADPMEVLKKVSADVNRRQ
Sequences:
>Translated_422_residues MKKLLLWAAATALSSLTLTAELHAGTVKMWTFLNPNNNSGLEVALRNIVTEFEKENPQIDVVVEPQAWATMSEKFVLSHS TNTAPDIIWSAKNLGLLVNSGSLAPLNPYLGGWDGPEGGDLLFKKAYENATYDGNLMAVPIFAYAVLLFYRKDIFEELGL TEESIATWDGLIETARKLKAAGKPGLLVPTSVDKPSEGVAADAYVQLNGGQMFDEGCVANFASENGLRALELQVRMFKEG ILSQEDLVRNNDDDWDLFKGGRGAIIPQVNDRAGALFASTDWANEKTVGITRWPNFPGETEGSAVGAAWQASLWTGSQNK EEAAKFILFMVSKFAARQWAREGKLLPIRASIATDPEFSGGIYEFNKKAGKLVEETGVFQRPGCNFSPAVVGWNTAVQEV VLNNADPMEVLKKVSADVNRRQ >Mature_422_residues MKKLLLWAAATALSSLTLTAELHAGTVKMWTFLNPNNNSGLEVALRNIVTEFEKENPQIDVVVEPQAWATMSEKFVLSHS TNTAPDIIWSAKNLGLLVNSGSLAPLNPYLGGWDGPEGGDLLFKKAYENATYDGNLMAVPIFAYAVLLFYRKDIFEELGL TEESIATWDGLIETARKLKAAGKPGLLVPTSVDKPSEGVAADAYVQLNGGQMFDEGCVANFASENGLRALELQVRMFKEG ILSQEDLVRNNDDDWDLFKGGRGAIIPQVNDRAGALFASTDWANEKTVGITRWPNFPGETEGSAVGAAWQASLWTGSQNK EEAAKFILFMVSKFAARQWAREGKLLPIRASIATDPEFSGGIYEFNKKAGKLVEETGVFQRPGCNFSPAVVGWNTAVQEV VLNNADPMEVLKKVSADVNRRQ
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 46070; Mature: 46070
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLWAAATALSSLTLTAELHAGTVKMWTFLNPNNNSGLEVALRNIVTEFEKENPQID CCCEEHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEE VVVEPQAWATMSEKFVLSHSTNTAPDIIWSAKNLGLLVNSGSLAPLNPYLGGWDGPEGGD EEECCCHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC LLFKKAYENATYDGNLMAVPIFAYAVLLFYRKDIFEELGLTEESIATWDGLIETARKLKA HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGKPGLLVPTSVDKPSEGVAADAYVQLNGGQMFDEGCVANFASENGLRALELQVRMFKEG CCCCCEEEECCCCCCCCCCEEEEEEEECCCEEECCHHHHHHHCCCCCEEEHHHHHHHHHH ILSQEDLVRNNDDDWDLFKGGRGAIIPQVNDRAGALFASTDWANEKTVGITRWPNFPGET CCCHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCC EGSAVGAAWQASLWTGSQNKEEAAKFILFMVSKFAARQWAREGKLLPIRASIATDPEFSG CCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC GIYEFNKKAGKLVEETGVFQRPGCNFSPAVVGWNTAVQEVVLNNADPMEVLKKVSADVNR CCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCC RQ CC >Mature Secondary Structure MKKLLLWAAATALSSLTLTAELHAGTVKMWTFLNPNNNSGLEVALRNIVTEFEKENPQID CCCEEHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEE VVVEPQAWATMSEKFVLSHSTNTAPDIIWSAKNLGLLVNSGSLAPLNPYLGGWDGPEGGD EEECCCHHHCCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCC LLFKKAYENATYDGNLMAVPIFAYAVLLFYRKDIFEELGLTEESIATWDGLIETARKLKA HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGKPGLLVPTSVDKPSEGVAADAYVQLNGGQMFDEGCVANFASENGLRALELQVRMFKEG CCCCCEEEECCCCCCCCCCEEEEEEEECCCEEECCHHHHHHHCCCCCEEEHHHHHHHHHH ILSQEDLVRNNDDDWDLFKGGRGAIIPQVNDRAGALFASTDWANEKTVGITRWPNFPGET CCCHHHHHCCCCCCHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCC EGSAVGAAWQASLWTGSQNKEEAAKFILFMVSKFAARQWAREGKLLPIRASIATDPEFSG CCCEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC GIYEFNKKAGKLVEETGVFQRPGCNFSPAVVGWNTAVQEVVLNNADPMEVLKKVSADVNR CCEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCC RQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA