| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634635
Identifier: 110634635
GI number: 110634635
Start: 2440672
End: 2441964
Strand: Reverse
Name: 110634635
Synonym: Meso_2289
Alternate gene names: NA
Gene position: 2441964-2440672 (Counterclockwise)
Preceding gene: 110634637
Following gene: 110634634
Centisome position: 55.34
GC content: 63.81
Gene sequence:
>1293_bases ATGTCCCGCATCGTTGTTCTCGGCGCCGGCCTGGGCGGCGTCATAATGGCCTACGAGATGAAGGACAAGATGCGTCCCTC GGACGAACTGACCGTCATCAATCTCGGCTCCACCTATTCCTTCGTTCCCTCCAATCCCTGGGTAGCCGTCGGTTGGCGTG AGCCCGAGGAGGTCACCGTCGATCTCGCGCCCATCTTCGAACATCGCGGTATCAACCTGAGGTCGGAAGGCGCAAGGCGC GTGATGGCATCGGAAAACCGTGTCGCGCTCAACGACGGTACATTCGTCGACTACGACTACCTGATCGTGGCCACGGGCCC CGATCTCGCCTTCGACGAGGTGCCCGGGCTGGGGCCGGAAGGCCACACCCAGTCGATCTGTCAGGTCGATCATGCGGTGG AGGCGAATCGCGCGTTCGGTGCGCTGCTGAAGGAGCCGGGCCCGATCGTGGTCGGCGCGGTCCAGGGCGCCTCCTGCTTC GGCCCGGCCTACGAGTTCGCCTTCATCCTCGACGCGGCGCTCCGGCAGGCGAAGAAGCGTGACAAAGTCCCGATCACCTT CGTCACACCCGAGCCCTATATCGGCCATCTCGGCCTCGACGGGGTGGGCGACACCAAGGGTCTCATCGAAAGCGCCATGC GCGAGCGCCACATTAAATGGATCACCAGCGCCAAGGTGGCGAAGGTGGAGCCCGGCCGGATGTATGTGGAGGAAGTCGAT GATGCCGGCGAGACCGCAGCCAAGCACGAGCTTCCCTTCGCCTTCTCCATGATGCTGCCCGCCTTTCGCGGTGTGCAGGC CGTTTATGGCATTAAGGGGCTCGTCAATCCGCGCGGCTTCGTCACCGTCGACAAGCATCAGCGCAACGAGGCGTTCCCCA ATATCTTCGCCGTGGGCGTGTGCGTGGCCATTCCGCCGGTTGGCAAGACGCCGCTGCCCGTGGGCGTGCCGAAGACCGGC TTCATGATCGAGTCGATGGTCACGGCCACGGCAGTGAACATCGCCGCCTTGCTGAACGGCGAGGAGCCGAGGGCGGTCGC CTCCTGGAACGCGGTCTGCCTCGCCGATTTCGGCGACGAGGGCATCGCCTTCGTGGCGCAGCCGCAGATTCCGCCGCGCA ACGTCAACTGGTCCTCGCAGGGCCGCTGGGTGCACGCGGCCAAGATCGGCTTTGAGAAGTACTTCCTGCACAAGGTCCGG CAAGGCAAGGCGGAGACCTTCTACGAGAATCTCGCCCTGCACATGCTCGGCATTCGAAAACTCAAGGAAATCGAGATCGA GCCGGGCGAATGA
Upstream 100 bases:
>100_bases TGTCCTTCGGTCATTTCCACCGGAGTTTGCGCCGGATCAAAGCCCCTCCGGATCGGAGAGGTTAGATGGACCTTCGGCAA TCCCGCCAAGGAGAATTGGC
Downstream 100 bases:
>100_bases ACGCACGGCCAACCCCAAGGAGAACGACAATGACCCTCGACCGTACCGTCATGATGTTTGCCGGCATCATGGTGCTCGCT TCGCTGGCGCTCGGCTTCTA
Product: sulfide-quinone reductase
Products: NA
Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Flavoprotein Reductase; Sulfide Dehydrogenase Related Protein
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARR VMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCF GPAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTG FMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVR QGKAETFYENLALHMLGIRKLKEIEIEPGE
Sequences:
>Translated_430_residues MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARR VMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCF GPAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTG FMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVR QGKAETFYENLALHMLGIRKLKEIEIEPGE >Mature_429_residues SRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARRV MASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFG PAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVDD AGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTGF MIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQ GKAETFYENLALHMLGIRKLKEIEIEPGE
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24657386, Length=292, Percent_Identity=23.6301369863014, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24657391, Length=292, Percent_Identity=23.6301369863014, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46778; Mature: 46647
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTV CCEEEEEECCCCCEEEEEEHHHCCCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEE DLAPIFEHRGINLRSEGARRVMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPE EEEHHHHCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEEEEECCCCCCHHCCCCCCCC GHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFGPAYEFAFILDAALRQAKKR CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC DKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD CCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEEHHHHC DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEE CVAIPPVGKTPLPVGVPKTGFMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDE EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCEEEEEECCCC GIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQGKAETFYENLALHMLGIRK CEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKEIEIEPGE HHEEECCCCC >Mature Secondary Structure SRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTV CEEEEEECCCCCEEEEEEHHHCCCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEE DLAPIFEHRGINLRSEGARRVMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPE EEEHHHHCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEEEEECCCCCCHHCCCCCCCC GHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFGPAYEFAFILDAALRQAKKR CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC DKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD CCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEEHHHHC DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGV CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEE CVAIPPVGKTPLPVGVPKTGFMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDE EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCEEEEEECCCC GIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQGKAETFYENLALHMLGIRK CEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LKEIEIEPGE HHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA