Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

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The map label for this gene is 110634635

Identifier: 110634635

GI number: 110634635

Start: 2440672

End: 2441964

Strand: Reverse

Name: 110634635

Synonym: Meso_2289

Alternate gene names: NA

Gene position: 2441964-2440672 (Counterclockwise)

Preceding gene: 110634637

Following gene: 110634634

Centisome position: 55.34

GC content: 63.81

Gene sequence:

>1293_bases
ATGTCCCGCATCGTTGTTCTCGGCGCCGGCCTGGGCGGCGTCATAATGGCCTACGAGATGAAGGACAAGATGCGTCCCTC
GGACGAACTGACCGTCATCAATCTCGGCTCCACCTATTCCTTCGTTCCCTCCAATCCCTGGGTAGCCGTCGGTTGGCGTG
AGCCCGAGGAGGTCACCGTCGATCTCGCGCCCATCTTCGAACATCGCGGTATCAACCTGAGGTCGGAAGGCGCAAGGCGC
GTGATGGCATCGGAAAACCGTGTCGCGCTCAACGACGGTACATTCGTCGACTACGACTACCTGATCGTGGCCACGGGCCC
CGATCTCGCCTTCGACGAGGTGCCCGGGCTGGGGCCGGAAGGCCACACCCAGTCGATCTGTCAGGTCGATCATGCGGTGG
AGGCGAATCGCGCGTTCGGTGCGCTGCTGAAGGAGCCGGGCCCGATCGTGGTCGGCGCGGTCCAGGGCGCCTCCTGCTTC
GGCCCGGCCTACGAGTTCGCCTTCATCCTCGACGCGGCGCTCCGGCAGGCGAAGAAGCGTGACAAAGTCCCGATCACCTT
CGTCACACCCGAGCCCTATATCGGCCATCTCGGCCTCGACGGGGTGGGCGACACCAAGGGTCTCATCGAAAGCGCCATGC
GCGAGCGCCACATTAAATGGATCACCAGCGCCAAGGTGGCGAAGGTGGAGCCCGGCCGGATGTATGTGGAGGAAGTCGAT
GATGCCGGCGAGACCGCAGCCAAGCACGAGCTTCCCTTCGCCTTCTCCATGATGCTGCCCGCCTTTCGCGGTGTGCAGGC
CGTTTATGGCATTAAGGGGCTCGTCAATCCGCGCGGCTTCGTCACCGTCGACAAGCATCAGCGCAACGAGGCGTTCCCCA
ATATCTTCGCCGTGGGCGTGTGCGTGGCCATTCCGCCGGTTGGCAAGACGCCGCTGCCCGTGGGCGTGCCGAAGACCGGC
TTCATGATCGAGTCGATGGTCACGGCCACGGCAGTGAACATCGCCGCCTTGCTGAACGGCGAGGAGCCGAGGGCGGTCGC
CTCCTGGAACGCGGTCTGCCTCGCCGATTTCGGCGACGAGGGCATCGCCTTCGTGGCGCAGCCGCAGATTCCGCCGCGCA
ACGTCAACTGGTCCTCGCAGGGCCGCTGGGTGCACGCGGCCAAGATCGGCTTTGAGAAGTACTTCCTGCACAAGGTCCGG
CAAGGCAAGGCGGAGACCTTCTACGAGAATCTCGCCCTGCACATGCTCGGCATTCGAAAACTCAAGGAAATCGAGATCGA
GCCGGGCGAATGA

Upstream 100 bases:

>100_bases
TGTCCTTCGGTCATTTCCACCGGAGTTTGCGCCGGATCAAAGCCCCTCCGGATCGGAGAGGTTAGATGGACCTTCGGCAA
TCCCGCCAAGGAGAATTGGC

Downstream 100 bases:

>100_bases
ACGCACGGCCAACCCCAAGGAGAACGACAATGACCCTCGACCGTACCGTCATGATGTTTGCCGGCATCATGGTGCTCGCT
TCGCTGGCGCTCGGCTTCTA

Product: sulfide-quinone reductase

Products: NA

Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SulfideQuinone Oxidoreductase; Sulfide Quinone Reductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; Flavoprotein Reductase; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARR
VMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCF
GPAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD
DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTG
FMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVR
QGKAETFYENLALHMLGIRKLKEIEIEPGE

Sequences:

>Translated_430_residues
MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARR
VMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCF
GPAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD
DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTG
FMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVR
QGKAETFYENLALHMLGIRKLKEIEIEPGE
>Mature_429_residues
SRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTVDLAPIFEHRGINLRSEGARRV
MASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPEGHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFG
PAYEFAFILDAALRQAKKRDKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVDD
AGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGVCVAIPPVGKTPLPVGVPKTGF
MIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDEGIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQ
GKAETFYENLALHMLGIRKLKEIEIEPGE

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24657386, Length=292, Percent_Identity=23.6301369863014, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24657391, Length=292, Percent_Identity=23.6301369863014, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46778; Mature: 46647

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTV
CCEEEEEECCCCCEEEEEEHHHCCCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEE
DLAPIFEHRGINLRSEGARRVMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPE
EEEHHHHCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEEEEECCCCCCHHCCCCCCCC
GHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFGPAYEFAFILDAALRQAKKR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
DKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD
CCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEEHHHHC
DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGV
CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEE
CVAIPPVGKTPLPVGVPKTGFMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDE
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCEEEEEECCCC
GIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQGKAETFYENLALHMLGIRK
CEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEIEIEPGE
HHEEECCCCC
>Mature Secondary Structure 
SRIVVLGAGLGGVIMAYEMKDKMRPSDELTVINLGSTYSFVPSNPWVAVGWREPEEVTV
CEEEEEECCCCCEEEEEEHHHCCCCCCCEEEEEECCEEEECCCCCEEEECCCCCCCEEE
DLAPIFEHRGINLRSEGARRVMASENRVALNDGTFVDYDYLIVATGPDLAFDEVPGLGPE
EEEHHHHCCCCCCCCCCHHHHHCCCCEEEECCCCEEEEEEEEEECCCCCCHHCCCCCCCC
GHTQSICQVDHAVEANRAFGALLKEPGPIVVGAVQGASCFGPAYEFAFILDAALRQAKKR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
DKVPITFVTPEPYIGHLGLDGVGDTKGLIESAMRERHIKWITSAKVAKVEPGRMYVEEVD
CCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCEEEEECCCCEEHHHHC
DAGETAAKHELPFAFSMMLPAFRGVQAVYGIKGLVNPRGFVTVDKHQRNEAFPNIFAVGV
CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEE
CVAIPPVGKTPLPVGVPKTGFMIESMVTATAVNIAALLNGEEPRAVASWNAVCLADFGDE
EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEECCCEEEEEECCCC
GIAFVAQPQIPPRNVNWSSQGRWVHAAKIGFEKYFLHKVRQGKAETFYENLALHMLGIRK
CEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKEIEIEPGE
HHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA