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The map label for this gene is ybjY [C]

Identifier: 110634629

GI number: 110634629

Start: 2433816

End: 2435012

Strand: Direct

Name: ybjY [C]

Synonym: Meso_2283

Alternate gene names: 110634629

Gene position: 2433816-2435012 (Clockwise)

Preceding gene: 110634628

Following gene: 110634630

Centisome position: 55.16

GC content: 65.91

Gene sequence:

>1197_bases
ATGAAATCCCCCTGGTTCAAACGCATTCTCTTCGGGCTTGCCGCCGTCGCGGTGATCGCCCTCTTGGCCTGGTCCCTGCG
CGAGCAGCCGGCCCTCGTCGACGTGGCTGAAGTGAAGCAGGGACCGATGAAGGTGACGGTCCGTGAGGAAGGCGTCACGC
GGGTTCGCGAGGTGTATGCCGTCTCCGCTCCGATCGCCGGGCAACTTTCGCGCACCCTGCTCAACGAGGGTGATCGCGTA
AAGGCCGGCGAAACCGTGGTCGCGGCGATCCATCCGCTCGCCCCGCCGCTGATCGACAGGCGCACCGAGGCCGAACTGCT
CGCCGCTCGCGATGCCGCGCGCTCCGGCGTGGGCATTGCCGAGAGCGAGCTGCAACGCGCCGAGACCGCCCTGCGCCTTG
CCGAGACGGAACTCGGCCGCGCGCTCAAGCTGGCGGTGCCAGGCGTCATTTCCGAGAGCGCTTTGCACCGCGCAACGAAT
GAATTCGAACTGCAGAAGGCGGCAGTGGAAGCCGCAAAGGCGACGGTCGGGTTCCGCCGCGCGGAGCTTGCGAGCGCGGA
GGCCCGCCTCATGCAGCCGGGATCCGCAGCTTTGGATGCTAAAGGCTGCTGCGTCGATGTTCTCGCGCCCGTGGACGGTG
TCGTGCTCGCCGTCGCGGCCAAGAGCGAACAGGCTGTGGCGGCCGGCGCGCGCATCGCCGATATCGGCAACACCACAGAC
CTCGAAATCGTGGCCGACCTTCTGTCGGCCGATGCCGTCCGTATCGGCCACGGAACCAAGGCGCTCGTGCGGGACTGGGG
CGGTGAGCGCAGCCTTGAGGCCACCATCCGCCGCGTCGATCCCGCCGCATTTACGAAAGTCTCCGCCCTCGGCATCGAGG
AGCAGCGCGTCAACACCGTTCTCGATCTCGACGAGGGCGATGGTCGGCTGGGGCACGGCTACCGCGTTTTCGTGGAACTG
GCCATCTGGGAATGTGCCGACTGCCTGCAGGTGCCCATCAGCGCCCTGTTCCGGAACGGGAGCGATTGGAACGTGTTCCT
GCTTACAGGCGATCGCGTGAAGCAGACTGCCGTGGAGATCGGCCATATGAACGATGAAGTGGCCCAAATTCTTGGCGGGG
TAACATCCGGAGATATCGTGGTACTGCATCCGGCTGATACCCTCGCCGACAACAGCCGCGCAGAGCGACGCGAATAG

Upstream 100 bases:

>100_bases
CTCATCGTCGTAACCGTTGCGGCGATCTCGGCGCTGATCGTGCGCCGCCGCATCGACAGGCTCGATCTGGTGCGCGTTCT
TAAGACAAGGGAATGATCCA

Downstream 100 bases:

>100_bases
GCGTGACATGCCCTCCCGCCAAGATTGATCTGTGAGGACAGGAGACAGGCTGATGTTTATCCTCACCCTGAGCGAGACCG
AATGCAGGAAGACGCTGGCC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Multidrug Resistance Efflux Pump-Like Protein; Membrane Fusion Protein AcrA; Membrane Fusion Protein

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKSPWFKRILFGLAAVAVIALLAWSLREQPALVDVAEVKQGPMKVTVREEGVTRVREVYAVSAPIAGQLSRTLLNEGDRV
KAGETVVAAIHPLAPPLIDRRTEAELLAARDAARSGVGIAESELQRAETALRLAETELGRALKLAVPGVISESALHRATN
EFELQKAAVEAAKATVGFRRAELASAEARLMQPGSAALDAKGCCVDVLAPVDGVVLAVAAKSEQAVAAGARIADIGNTTD
LEIVADLLSADAVRIGHGTKALVRDWGGERSLEATIRRVDPAAFTKVSALGIEEQRVNTVLDLDEGDGRLGHGYRVFVEL
AIWECADCLQVPISALFRNGSDWNVFLLTGDRVKQTAVEIGHMNDEVAQILGGVTSGDIVVLHPADTLADNSRAERRE

Sequences:

>Translated_398_residues
MKSPWFKRILFGLAAVAVIALLAWSLREQPALVDVAEVKQGPMKVTVREEGVTRVREVYAVSAPIAGQLSRTLLNEGDRV
KAGETVVAAIHPLAPPLIDRRTEAELLAARDAARSGVGIAESELQRAETALRLAETELGRALKLAVPGVISESALHRATN
EFELQKAAVEAAKATVGFRRAELASAEARLMQPGSAALDAKGCCVDVLAPVDGVVLAVAAKSEQAVAAGARIADIGNTTD
LEIVADLLSADAVRIGHGTKALVRDWGGERSLEATIRRVDPAAFTKVSALGIEEQRVNTVLDLDEGDGRLGHGYRVFVEL
AIWECADCLQVPISALFRNGSDWNVFLLTGDRVKQTAVEIGHMNDEVAQILGGVTSGDIVVLHPADTLADNSRAERRE
>Mature_398_residues
MKSPWFKRILFGLAAVAVIALLAWSLREQPALVDVAEVKQGPMKVTVREEGVTRVREVYAVSAPIAGQLSRTLLNEGDRV
KAGETVVAAIHPLAPPLIDRRTEAELLAARDAARSGVGIAESELQRAETALRLAETELGRALKLAVPGVISESALHRATN
EFELQKAAVEAAKATVGFRRAELASAEARLMQPGSAALDAKGCCVDVLAPVDGVVLAVAAKSEQAVAAGARIADIGNTTD
LEIVADLLSADAVRIGHGTKALVRDWGGERSLEATIRRVDPAAFTKVSALGIEEQRVNTVLDLDEGDGRLGHGYRVFVEL
AIWECADCLQVPISALFRNGSDWNVFLLTGDRVKQTAVEIGHMNDEVAQILGGVTSGDIVVLHPADTLADNSRAERRE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42342; Mature: 42342

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPWFKRILFGLAAVAVIALLAWSLREQPALVDVAEVKQGPMKVTVREEGVTRVREVYA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCEEEEEEHHHHHHHHHHHH
VSAPIAGQLSRTLLNEGDRVKAGETVVAAIHPLAPPLIDRRTEAELLAARDAARSGVGIA
HCCCHHHHHHHHHHCCCCCEECCCEEEEEHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCC
ESELQRAETALRLAETELGRALKLAVPGVISESALHRATNEFELQKAAVEAAKATVGFRR
HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AELASAEARLMQPGSAALDAKGCCVDVLAPVDGVVLAVAAKSEQAVAAGARIADIGNTTD
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHCCCEEEECCCCCH
LEIVADLLSADAVRIGHGTKALVRDWGGERSLEATIRRVDPAAFTKVSALGIEEQRVNTV
HHHHHHHHHCCCEEECCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHCCEE
LDLDEGDGRLGHGYRVFVELAIWECADCLQVPISALFRNGSDWNVFLLTGDRVKQTAVEI
EECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
GHMNDEVAQILGGVTSGDIVVLHPADTLADNSRAERRE
CCCCHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHCCC
>Mature Secondary Structure
MKSPWFKRILFGLAAVAVIALLAWSLREQPALVDVAEVKQGPMKVTVREEGVTRVREVYA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCEEEEEEHHHHHHHHHHHH
VSAPIAGQLSRTLLNEGDRVKAGETVVAAIHPLAPPLIDRRTEAELLAARDAARSGVGIA
HCCCHHHHHHHHHHCCCCCEECCCEEEEEHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCC
ESELQRAETALRLAETELGRALKLAVPGVISESALHRATNEFELQKAAVEAAKATVGFRR
HHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AELASAEARLMQPGSAALDAKGCCVDVLAPVDGVVLAVAAKSEQAVAAGARIADIGNTTD
HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCHHHHCCCEEEECCCCCH
LEIVADLLSADAVRIGHGTKALVRDWGGERSLEATIRRVDPAAFTKVSALGIEEQRVNTV
HHHHHHHHHCCCEEECCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHCCCCHHHCCEE
LDLDEGDGRLGHGYRVFVELAIWECADCLQVPISALFRNGSDWNVFLLTGDRVKQTAVEI
EECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
GHMNDEVAQILGGVTSGDIVVLHPADTLADNSRAERRE
CCCCHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA