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The map label for this gene is hspC2 [H]

Identifier: 110634622

GI number: 110634622

Start: 2427448

End: 2427975

Strand: Direct

Name: hspC2 [H]

Synonym: Meso_2276

Alternate gene names: 110634622

Gene position: 2427448-2427975 (Clockwise)

Preceding gene: 110634621

Following gene: 110634623

Centisome position: 55.01

GC content: 58.14

Gene sequence:

>528_bases
ATGGCCGAAACTGCCACAAAACTGCCGGTGAAATCCGAAAAATCCGTTGCGTCTCCTGAGGGATGGGCGCCGTTTGAGAG
CCTGCGGCGGGAGATCGATCGTCTCTTCGACGATTTCCATCCATTCGGCTGGCGCCTGCCGTCCCGTACCGCCTTCGACC
TTGAGATACCGAAGTTCAGCCGCGCCGCCTGGCAGGTCGCACCGGCAATGGATCTCGTCGAAAAGGAGAAGGAATACGAA
ATCACGGCCGAGCTTCCCGGCATCGACGAGAAGAACGTCGAGATCAAGCTTTCCAACCACACGCTGACGATCAAGGGCGA
GAAGAAGGAAGAGAAGGAGGAAAAGGACAAGGACTATTACCTGTCCGAGCGCCGCTACGGCTCCTTCCAGCGCTCCTTCC
GAGTCCCCGACGGAGTGGACGCGGACAAGATCGAGGCTACCTTCACCAAAGGTGTCCTGACTGTGAGGCTGCCAAAGACA
GCTCAGGCGCAGAAGGCTGACAAGAAGATCGAAGTCAAGGCCGCGTGA

Upstream 100 bases:

>100_bases
CCGCTTGCCTCCGGCCCGCGCGCCTTTCGGGGAGACCCGATGTCGACGGGCGGAGGCGGCGGCACCTGCCGGTTCCAAGA
GAAACAAGGAGTATCGATCC

Downstream 100 bases:

>100_bases
GACGGCAAAGCCTGCGCCGGAGCGGGCACACGCAAGAGCCGGGGAAAGATCCATGGCACAACCACAGCTACCCGATCTCT
GCGAAGCCGTGGAGCTTGCA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAETATKLPVKSEKSVASPEGWAPFESLRREIDRLFDDFHPFGWRLPSRTAFDLEIPKFSRAAWQVAPAMDLVEKEKEYE
ITAELPGIDEKNVEIKLSNHTLTIKGEKKEEKEEKDKDYYLSERRYGSFQRSFRVPDGVDADKIEATFTKGVLTVRLPKT
AQAQKADKKIEVKAA

Sequences:

>Translated_175_residues
MAETATKLPVKSEKSVASPEGWAPFESLRREIDRLFDDFHPFGWRLPSRTAFDLEIPKFSRAAWQVAPAMDLVEKEKEYE
ITAELPGIDEKNVEIKLSNHTLTIKGEKKEEKEEKDKDYYLSERRYGSFQRSFRVPDGVDADKIEATFTKGVLTVRLPKT
AQAQKADKKIEVKAA
>Mature_174_residues
AETATKLPVKSEKSVASPEGWAPFESLRREIDRLFDDFHPFGWRLPSRTAFDLEIPKFSRAAWQVAPAMDLVEKEKEYEI
TAELPGIDEKNVEIKLSNHTLTIKGEKKEEKEEKDKDYYLSERRYGSFQRSFRVPDGVDADKIEATFTKGVLTVRLPKTA
QAQKADKKIEVKAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 20049; Mature: 19918

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETATKLPVKSEKSVASPEGWAPFESLRREIDRLFDDFHPFGWRLPSRTAFDLEIPKFS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
RAAWQVAPAMDLVEKEKEYEITAELPGIDEKNVEIKLSNHTLTIKGEKKEEKEEKDKDYY
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHH
LSERRYGSFQRSFRVPDGVDADKIEATFTKGVLTVRLPKTAQAQKADKKIEVKAA
HHHHHCCCHHHHCCCCCCCCHHHHHHEECCCEEEEECCCCCCHHCCCCEEEEEEC
>Mature Secondary Structure 
AETATKLPVKSEKSVASPEGWAPFESLRREIDRLFDDFHPFGWRLPSRTAFDLEIPKFS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC
RAAWQVAPAMDLVEKEKEYEITAELPGIDEKNVEIKLSNHTLTIKGEKKEEKEEKDKDYY
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHH
LSERRYGSFQRSFRVPDGVDADKIEATFTKGVLTVRLPKTAQAQKADKKIEVKAA
HHHHHCCCHHHHCCCCCCCCHHHHHHEECCCEEEEECCCCCCHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA