Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634615

Identifier: 110634615

GI number: 110634615

Start: 2422019

End: 2422573

Strand: Direct

Name: 110634615

Synonym: Meso_2269

Alternate gene names: NA

Gene position: 2422019-2422573 (Clockwise)

Preceding gene: 110634614

Following gene: 110634616

Centisome position: 54.89

GC content: 63.24

Gene sequence:

>555_bases
ATGTCCGGGCGCAAGGCGGCGATGATCCTGCTCGGCGGCGTCCTGTCGGTGCTCGCGGGATCGCTGCTGGCGCAACCGGA
CTTCGGCTTCATGCCGGATGGCGGGCGACAGACACTGCTGCGGCTTGCCCGTTCCTCGGCGATCGATCTCGAGGAGATCG
CTCGCGGAATCGGCACGGAGGAAGAATGGAAGGCTATCGTGGCGGCCGCTGATCCGGACCTGTCGTCAGATGCGGTCGAG
ACACTCGCCTCCTATCTGGCGGTCAACATGCCGGCCCAGATCGATACTCCGGCAGCCGCCGGAATCGAGGAGCTTGCGGC
CGCACTGCCTCTGGACGGCAAGGAGCTGGCGATCGAGAACTGCCAGTTCTGCCATTCCTTCTTCACCGGATATCTCGCGC
ATGACCGCGACACGGAAGGCTGGCGCAGTGTCTTCAAAGCGCCATTCCACAAGGAGCTGCCGATGACGGAGAAGGAGCGC
GAGACCTTCGCCCGCTACTCGGCAATCAACATGCCGATCCCCTACGAAAAGGTGCCGGAGGATCTCCGTTTTTGA

Upstream 100 bases:

>100_bases
TCCCGGCCGAGATGGCCACCGCCCGGATCCACGTGCCGGTCTTCTCCTTCTCGCACCGCGTCCCGGCGGATGTGGCCGCG
CAACTTGCGGAGCAGGAGTG

Downstream 100 bases:

>100_bases
GATGTGCCGCTCCTCCACCATCAGGAGATGACTATGAAGTTCCCGACAAAGATTGCAGCCCTCGCCCTGCTTCTGACCGC
AAGCCTTACGCCCCTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSGRKAAMILLGGVLSVLAGSLLAQPDFGFMPDGGRQTLLRLARSSAIDLEEIARGIGTEEEWKAIVAAADPDLSSDAVE
TLASYLAVNMPAQIDTPAAAGIEELAAALPLDGKELAIENCQFCHSFFTGYLAHDRDTEGWRSVFKAPFHKELPMTEKER
ETFARYSAINMPIPYEKVPEDLRF

Sequences:

>Translated_184_residues
MSGRKAAMILLGGVLSVLAGSLLAQPDFGFMPDGGRQTLLRLARSSAIDLEEIARGIGTEEEWKAIVAAADPDLSSDAVE
TLASYLAVNMPAQIDTPAAAGIEELAAALPLDGKELAIENCQFCHSFFTGYLAHDRDTEGWRSVFKAPFHKELPMTEKER
ETFARYSAINMPIPYEKVPEDLRF
>Mature_183_residues
SGRKAAMILLGGVLSVLAGSLLAQPDFGFMPDGGRQTLLRLARSSAIDLEEIARGIGTEEEWKAIVAAADPDLSSDAVET
LASYLAVNMPAQIDTPAAAGIEELAAALPLDGKELAIENCQFCHSFFTGYLAHDRDTEGWRSVFKAPFHKELPMTEKERE
TFARYSAINMPIPYEKVPEDLRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20061; Mature: 19930

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRKAAMILLGGVLSVLAGSLLAQPDFGFMPDGGRQTLLRLARSSAIDLEEIARGIGTE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
EEWKAIVAAADPDLSSDAVETLASYLAVNMPAQIDTPAAAGIEELAAALPLDGKELAIEN
HHHHEEHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCCHHHHHHH
CQFCHSFFTGYLAHDRDTEGWRSVFKAPFHKELPMTEKERETFARYSAINMPIPYEKVPE
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCH
DLRF
HCCC
>Mature Secondary Structure 
SGRKAAMILLGGVLSVLAGSLLAQPDFGFMPDGGRQTLLRLARSSAIDLEEIARGIGTE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
EEWKAIVAAADPDLSSDAVETLASYLAVNMPAQIDTPAAAGIEELAAALPLDGKELAIEN
HHHHEEHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHCCCCCHHHHHHH
CQFCHSFFTGYLAHDRDTEGWRSVFKAPFHKELPMTEKERETFARYSAINMPIPYEKVPE
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCH
DLRF
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA