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The map label for this gene is osmY [C]

Identifier: 110634610

GI number: 110634610

Start: 2417914

End: 2418564

Strand: Reverse

Name: osmY [C]

Synonym: Meso_2264

Alternate gene names: 110634610

Gene position: 2418564-2417914 (Counterclockwise)

Preceding gene: 110634619

Following gene: 110634609

Centisome position: 54.81

GC content: 59.91

Gene sequence:

>651_bases
ATGAGCGATATCGATCTGAAGCAGGACATCATTGATGAGCTCGATTTCGAACCGAGCATTGATGCTGCCGACATCGGCGT
GGCGGTCGAGAACGGGATTGTGACGCTGACCGGACATGTTCCGACCTATGCACAGAAGTCCACGGTCGAGGACGTGGTTC
GCCGTGTGAAGGGCGTGAAGGGCATCGCTCAGGAGATCGAGGTCCGTCCGTACGGGAGCAACCAGACGGCTGACGACGAG
ATCGCCAAACGGGCGATCAACATGATCCACTGGAACACGGCCATTCCCGACAGCGCCGTCCAGGTCAAGGTCCAGAAAGG
CTGGGTGACACTGACCGGCAAGGTCGAGTGGCAGTATCAGAAGACCGCCGCCGCTGACGTGATCCGTGGCCTTGCGGGTG
TGGTCGGTATACAGAACAACATTGCGGTAAAGGCACATGCGTCAGCGTCTGACGTCAAGAAACGCATCGAGGATGCCCTG
AAACGCAACGCGGAAATCGAGGCCAGGGCGATCCGCGTCGACGTCCTCGACGGCGGAAAGGTAAGGCTCGAAGGCCGTGT
CCATGCATGGTCCGAGCGCAGCGCCGTCGAACGCGCAGCATGGTCCGCGCCGGGCGTCAACCTTGTCGAAGACCGCATTA
CCATTGGATGA

Upstream 100 bases:

>100_bases
ACCGATGCGTTGACGCCGATCAACGCCGCGCGACGTCGATGCGCCGATACTTGCCTCGCGAAAGGCGGGAATGGTCCCGC
TGCAACAGAGAGGCGAAGTT

Downstream 100 bases:

>100_bases
GCTCCACTCATTGCGTCATCATGTGACGGGAGACGGGTGTAGCATCCGCCTCCCGTCGACAACTTGGTAGTGAGAGAGGC
AGCCATGAAGGCGATGGTGC

Product: transport-associated

Products: NA

Alternate protein names: Osmotically Inducible Protein Y Domain Protein; Osmotically Inducible Protein Y; Lipoprotein; Transport Associated Protein; Periplasmic Or Secreted Lipoprotein; Osmotically Inducible Periplasmic Protein OsmY; Osmotically-Inducible Protein Y

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSDIDLKQDIIDELDFEPSIDAADIGVAVENGIVTLTGHVPTYAQKSTVEDVVRRVKGVKGIAQEIEVRPYGSNQTADDE
IAKRAINMIHWNTAIPDSAVQVKVQKGWVTLTGKVEWQYQKTAAADVIRGLAGVVGIQNNIAVKAHASASDVKKRIEDAL
KRNAEIEARAIRVDVLDGGKVRLEGRVHAWSERSAVERAAWSAPGVNLVEDRITIG

Sequences:

>Translated_216_residues
MSDIDLKQDIIDELDFEPSIDAADIGVAVENGIVTLTGHVPTYAQKSTVEDVVRRVKGVKGIAQEIEVRPYGSNQTADDE
IAKRAINMIHWNTAIPDSAVQVKVQKGWVTLTGKVEWQYQKTAAADVIRGLAGVVGIQNNIAVKAHASASDVKKRIEDAL
KRNAEIEARAIRVDVLDGGKVRLEGRVHAWSERSAVERAAWSAPGVNLVEDRITIG
>Mature_215_residues
SDIDLKQDIIDELDFEPSIDAADIGVAVENGIVTLTGHVPTYAQKSTVEDVVRRVKGVKGIAQEIEVRPYGSNQTADDEI
AKRAINMIHWNTAIPDSAVQVKVQKGWVTLTGKVEWQYQKTAAADVIRGLAGVVGIQNNIAVKAHASASDVKKRIEDALK
RNAEIEARAIRVDVLDGGKVRLEGRVHAWSERSAVERAAWSAPGVNLVEDRITIG

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23495; Mature: 23364

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIDLKQDIIDELDFEPSIDAADIGVAVENGIVTLTGHVPTYAQKSTVEDVVRRVKGVK
CCCCCHHHHHHHHCCCCCCCCHHHCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHH
GIAQEIEVRPYGSNQTADDEIAKRAINMIHWNTAIPDSAVQVKVQKGWVTLTGKVEWQYQ
HHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEEEEEH
KTAAADVIRGLAGVVGIQNNIAVKAHASASDVKKRIEDALKRNAEIEARAIRVDVLDGGK
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCE
VRLEGRVHAWSERSAVERAAWSAPGVNLVEDRITIG
EEEECEEECCHHHHHHHHHHCCCCCCCEECCEEECC
>Mature Secondary Structure 
SDIDLKQDIIDELDFEPSIDAADIGVAVENGIVTLTGHVPTYAQKSTVEDVVRRVKGVK
CCCCHHHHHHHHCCCCCCCCHHHCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHH
GIAQEIEVRPYGSNQTADDEIAKRAINMIHWNTAIPDSAVQVKVQKGWVTLTGKVEWQYQ
HHHHHCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEEEEEH
KTAAADVIRGLAGVVGIQNNIAVKAHASASDVKKRIEDALKRNAEIEARAIRVDVLDGGK
HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCE
VRLEGRVHAWSERSAVERAAWSAPGVNLVEDRITIG
EEEECEEECCHHHHHHHHHHCCCCCCCEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA