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The map label for this gene is 110634585

Identifier: 110634585

GI number: 110634585

Start: 2391017

End: 2391346

Strand: Direct

Name: 110634585

Synonym: Meso_2237

Alternate gene names: NA

Gene position: 2391017-2391346 (Clockwise)

Preceding gene: 110634581

Following gene: 110634586

Centisome position: 54.19

GC content: 61.82

Gene sequence:

>330_bases
ATGCAACAGAAGTATCGAATCATGACCACCACGGCTCTGCTCCTGGCGAGCATCCCAGCGCCTGCAATGTCCGAAAGCGC
CGAGATCGTACGCGGCCGGGCCCTCGTTGAGGCGAACTGCTCCCGTTGTCATGCGGTGAGCCGGGACGATGCCAGCATGC
ACCCGGAAGCGCCCGCATTCCGCACGCTTTGGGAGCGCTACCCCATCGATGCTCTCGAAGAAGCCTTCGCCGAAGGGATT
TATGTCGGCCATCCGGACATGCCGGAGTTCGTGGCCGACCCTGACCAGATCGCCGCCATTATCGCCTACATCGCGTCGAT
TCAGGACTGA

Upstream 100 bases:

>100_bases
AACACGCGGCGGTCGCGAATTTGTTTCCGTTTGACGCGGGTCAAGGCGCGATTGCGCCGATCTGCCAATTTACGCGGGAA
ACAAAGAGACACGCTCCGCG

Downstream 100 bases:

>100_bases
CGGCGGCAACCAAGGAACCAGAACCATGACTGAACACATAAAATGCATTCTCGTGGGCGTGGCCGCGAAGGACGATTTCT
CGGCCACGCCGGCGCTTGAA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C-Family Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQQKYRIMTTTALLLASIPAPAMSESAEIVRGRALVEANCSRCHAVSRDDASMHPEAPAFRTLWERYPIDALEEAFAEGI
YVGHPDMPEFVADPDQIAAIIAYIASIQD

Sequences:

>Translated_109_residues
MQQKYRIMTTTALLLASIPAPAMSESAEIVRGRALVEANCSRCHAVSRDDASMHPEAPAFRTLWERYPIDALEEAFAEGI
YVGHPDMPEFVADPDQIAAIIAYIASIQD
>Mature_109_residues
MQQKYRIMTTTALLLASIPAPAMSESAEIVRGRALVEANCSRCHAVSRDDASMHPEAPAFRTLWERYPIDALEEAFAEGI
YVGHPDMPEFVADPDQIAAIIAYIASIQD

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12007; Mature: 12007

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQKYRIMTTTALLLASIPAPAMSESAEIVRGRALVEANCSRCHAVSRDDASMHPEAPAF
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCHHH
RTLWERYPIDALEEAFAEGIYVGHPDMPEFVADPDQIAAIIAYIASIQD
HHHHHHCCHHHHHHHHHCCEECCCCCCHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQKYRIMTTTALLLASIPAPAMSESAEIVRGRALVEANCSRCHAVSRDDASMHPEAPAF
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCHHH
RTLWERYPIDALEEAFAEGIYVGHPDMPEFVADPDQIAAIIAYIASIQD
HHHHHHCCHHHHHHHHHCCEECCCCCCHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA