Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 110634547

GI number: 110634547

Start: 2345660

End: 2346541

Strand: Reverse

Name: yiiP [C]

Synonym: Meso_2198

Alternate gene names: 110634547

Gene position: 2346541-2345660 (Counterclockwise)

Preceding gene: 110634548

Following gene: 110634543

Centisome position: 53.18

GC content: 64.29

Gene sequence:

>882_bases
ATGCCGAAGCGCTCCAACATCCGCCGTCTGTCCACGTGGACCATCGTGGTCGGCATGGTCATCCTGGTGCTGAAATTCCT
TGCCTGGTGGCTGACCGGGTCCGTGGCGCTGCTATCGGATGCCATGGAATCCATCGTCAATGTCGTGGCGTCGCTGGCGG
CATGGTACGCGATCCGCGTCTCCTACATCCCGGCGGACGAGAACCATCCCTTCGGGCACCACAAGGCCGAGTACTTCTCG
GCGGTTCTCGAAGGCGTGCTCATCGTGCTCGCCGCGCTGCTCATCCTGCGGGAGGCGGCCGATGCCTTTTTCACGCTCCA
CAGGATCGAGGCGCCGGGCCCGGGCGTGGCGATCAATGCCGTAGCGGCGGTCGGCAACGGCCTCTGGGCTATGGTGCTGA
TGCGCGAGGGTCGCAAGGCGCGGTCGCCCGCGCTCGTCGCGGATGGGCGGCATCTTTGGGCTGACGTGGTCACCTCGGCG
GGGGTAATCGCCGGGCTGTTGTTCGCCCTTGCCACCGGCTGGCTTTGGCTCGATCCGCTGATGGCGGTGATCGTGGCCGT
CAACATCATCTGGCATGGTTGGAAGATGTTGAGTTCATCGGTGCAAGGGCTGATGGATGTGGCCGTGGACCCGGCCGACC
GTGCCGAGATCGAGCGGCTGATCGCGGAGAACAGCCAAGGAGCGCTGGAATTCCACGACCTGAAAACACGAGAAGCGGGC
CGGGCCCGCTTCATCGAATTCCATCTGGTGGTCCCTTCCGAGATGACGGTCGAGCGTTCGCACGACATTTGCGACCGCAT
CGAACACGCGCTGGGCAGGGAGATGCCGGGAACGCGCGTTGTCATCCATGTGGAGCCGGCGCATAAGGCCAAGCACGCTT
GA

Upstream 100 bases:

>100_bases
TCGAGAACGTTGTGGCGCATCTGCCGCGGAAATCCAAGGTGAAGGCGGCGTGACCATGCCGCCTTTTCATAACTCCGCGG
CAATGGCCGCCGCGTAGCCA

Downstream 100 bases:

>100_bases
GAGGGGCGAAGCTTATTTCGCCTTCTTGGTCTGCATCGTCTCGAAGCCATCTGCCACTGCACGTAAGTCCTCCGGAAAAT
CGTCCATCTCCATGATCTTC

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFS
AVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSA
GVIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG
RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA

Sequences:

>Translated_293_residues
MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFS
AVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSA
GVIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG
RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA
>Mature_292_residues
PKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFSA
VLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAG
VIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAGR
ARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=268, Percent_Identity=31.7164179104478, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786966, Length=292, Percent_Identity=26.7123287671233, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32143; Mature: 32012

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHE
SYIPADENHPFGHHKAEYFSAVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAGVIAGLLFALATGWLWLDPL
HHHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCC
RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCC
>Mature Secondary Structure 
PKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHE
SYIPADENHPFGHHKAEYFSAVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINA
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAGVIAGLLFALATGWLWLDPL
HHHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCC
RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]