| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yiiP [C]
Identifier: 110634547
GI number: 110634547
Start: 2345660
End: 2346541
Strand: Reverse
Name: yiiP [C]
Synonym: Meso_2198
Alternate gene names: 110634547
Gene position: 2346541-2345660 (Counterclockwise)
Preceding gene: 110634548
Following gene: 110634543
Centisome position: 53.18
GC content: 64.29
Gene sequence:
>882_bases ATGCCGAAGCGCTCCAACATCCGCCGTCTGTCCACGTGGACCATCGTGGTCGGCATGGTCATCCTGGTGCTGAAATTCCT TGCCTGGTGGCTGACCGGGTCCGTGGCGCTGCTATCGGATGCCATGGAATCCATCGTCAATGTCGTGGCGTCGCTGGCGG CATGGTACGCGATCCGCGTCTCCTACATCCCGGCGGACGAGAACCATCCCTTCGGGCACCACAAGGCCGAGTACTTCTCG GCGGTTCTCGAAGGCGTGCTCATCGTGCTCGCCGCGCTGCTCATCCTGCGGGAGGCGGCCGATGCCTTTTTCACGCTCCA CAGGATCGAGGCGCCGGGCCCGGGCGTGGCGATCAATGCCGTAGCGGCGGTCGGCAACGGCCTCTGGGCTATGGTGCTGA TGCGCGAGGGTCGCAAGGCGCGGTCGCCCGCGCTCGTCGCGGATGGGCGGCATCTTTGGGCTGACGTGGTCACCTCGGCG GGGGTAATCGCCGGGCTGTTGTTCGCCCTTGCCACCGGCTGGCTTTGGCTCGATCCGCTGATGGCGGTGATCGTGGCCGT CAACATCATCTGGCATGGTTGGAAGATGTTGAGTTCATCGGTGCAAGGGCTGATGGATGTGGCCGTGGACCCGGCCGACC GTGCCGAGATCGAGCGGCTGATCGCGGAGAACAGCCAAGGAGCGCTGGAATTCCACGACCTGAAAACACGAGAAGCGGGC CGGGCCCGCTTCATCGAATTCCATCTGGTGGTCCCTTCCGAGATGACGGTCGAGCGTTCGCACGACATTTGCGACCGCAT CGAACACGCGCTGGGCAGGGAGATGCCGGGAACGCGCGTTGTCATCCATGTGGAGCCGGCGCATAAGGCCAAGCACGCTT GA
Upstream 100 bases:
>100_bases TCGAGAACGTTGTGGCGCATCTGCCGCGGAAATCCAAGGTGAAGGCGGCGTGACCATGCCGCCTTTTCATAACTCCGCGG CAATGGCCGCCGCGTAGCCA
Downstream 100 bases:
>100_bases GAGGGGCGAAGCTTATTTCGCCTTCTTGGTCTGCATCGTCTCGAAGCCATCTGCCACTGCACGTAAGTCCTCCGGAAAAT CGTCCATCTCCATGATCTTC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFS AVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSA GVIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA
Sequences:
>Translated_293_residues MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFS AVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSA GVIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA >Mature_292_residues PKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRVSYIPADENHPFGHHKAEYFSA VLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINAVAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAG VIAGLLFALATGWLWLDPLMAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAGR ARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=268, Percent_Identity=31.7164179104478, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786966, Length=292, Percent_Identity=26.7123287671233, Blast_Score=71, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32143; Mature: 32012
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHE SYIPADENHPFGHHKAEYFSAVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINA EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAGVIAGLLFALATGWLWLDPL HHHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCC RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCC >Mature Secondary Structure PKRSNIRRLSTWTIVVGMVILVLKFLAWWLTGSVALLSDAMESIVNVVASLAAWYAIRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHE SYIPADENHPFGHHKAEYFSAVLEGVLIVLAALLILREAADAFFTLHRIEAPGPGVAINA EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH VAAVGNGLWAMVLMREGRKARSPALVADGRHLWADVVTSAGVIAGLLFALATGWLWLDPL HHHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVIVAVNIIWHGWKMLSSSVQGLMDVAVDPADRAEIERLIAENSQGALEFHDLKTREAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEHHHHHHCCCC RARFIEFHLVVPSEMTVERSHDICDRIEHALGREMPGTRVVIHVEPAHKAKHA CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]