| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634542
Identifier: 110634542
GI number: 110634542
Start: 2342527
End: 2342976
Strand: Direct
Name: 110634542
Synonym: Meso_2193
Alternate gene names: NA
Gene position: 2342527-2342976 (Clockwise)
Preceding gene: 110634541
Following gene: 110634544
Centisome position: 53.09
GC content: 56.0
Gene sequence:
>450_bases ATGAAGAAGACCTACCACGGAAGCTGCCATTGCGGCGCGGTGCGCTTTGCGGCCGATATCGACCTTGCATCGGCTGGCGA ACGCTCCGAACCCGCACGGCCAGGCATTTGGTGGACGTCCACCTTTCGCTGCAACTGCTCGTCTTGCCTGAAAACACGAT TCTGGAAAGCCTTTGTCCCACCGGAAGATTTCCAATTGCTCTCAGGCGCGGACGCTTTGACGGAATACCGCTTCGGCGAG AAAATGATCGGCCATGTGTTCTGCAAACATTGCGGTGTTCACCCCTTTGCCAGCGCTGATTTCGAAATCATGGGCGGAGC TTTCTACGCGGTGAACATAGTTTGCCTGGACGATGCCACCGAAGCGGAATTGGCTAGCGCGCCTATCATCTACGAGGACG GCCGGCACAACGCTTGGGATAAGTCTCCGAAGGTGACTTCCTATCTTTAG
Upstream 100 bases:
>100_bases CGAGCTTCCGCGACCAAGCCTCGAGAAAGACTCGCATTTCGCTCTTCAGGAAAGGGAGAGTGAGACACTGAGCCCGTCTT CACACATAAGGAGGACCGGA
Downstream 100 bases:
>100_bases AGCTGCGCCGAGGGCTGCCGCGCCGCCACCTCCTGATAGGCCGCATATAGCCTCTCGCGCACGCCCGGTCCTGGCCTTTG CTTCGTCGGGATGCCCAGAT
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKKTYHGSCHCGAVRFAADIDLASAGERSEPARPGIWWTSTFRCNCSSCLKTRFWKAFVPPEDFQLLSGADALTEYRFGE KMIGHVFCKHCGVHPFASADFEIMGGAFYAVNIVCLDDATEAELASAPIIYEDGRHNAWDKSPKVTSYL
Sequences:
>Translated_149_residues MKKTYHGSCHCGAVRFAADIDLASAGERSEPARPGIWWTSTFRCNCSSCLKTRFWKAFVPPEDFQLLSGADALTEYRFGE KMIGHVFCKHCGVHPFASADFEIMGGAFYAVNIVCLDDATEAELASAPIIYEDGRHNAWDKSPKVTSYL >Mature_149_residues MKKTYHGSCHCGAVRFAADIDLASAGERSEPARPGIWWTSTFRCNCSSCLKTRFWKAFVPPEDFQLLSGADALTEYRFGE KMIGHVFCKHCGVHPFASADFEIMGGAFYAVNIVCLDDATEAELASAPIIYEDGRHNAWDKSPKVTSYL
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=144, Percent_Identity=31.25, Blast_Score=67, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16523; Mature: 16523
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTYHGSCHCGAVRFAADIDLASAGERSEPARPGIWWTSTFRCNCSSCLKTRFWKAFVP CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECEEEECHHHHHHHHHHCCCCC PEDFQLLSGADALTEYRFGEKMIGHVFCKHCGVHPFASADFEIMGGAFYAVNIVCLDDAT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCC EAELASAPIIYEDGRHNAWDKSPKVTSYL CHHHHCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKTYHGSCHCGAVRFAADIDLASAGERSEPARPGIWWTSTFRCNCSSCLKTRFWKAFVP CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECEEEECHHHHHHHHHHCCCCC PEDFQLLSGADALTEYRFGEKMIGHVFCKHCGVHPFASADFEIMGGAFYAVNIVCLDDAT CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEEEEEECCCC EAELASAPIIYEDGRHNAWDKSPKVTSYL CHHHHCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA