Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110634535

Identifier: 110634535

GI number: 110634535

Start: 2336945

End: 2337442

Strand: Reverse

Name: 110634535

Synonym: Meso_2186

Alternate gene names: NA

Gene position: 2337442-2336945 (Counterclockwise)

Preceding gene: 110634537

Following gene: 110634533

Centisome position: 52.97

GC content: 60.84

Gene sequence:

>498_bases
ATGCCTTCACCCGCCCATGCCGAAACGCGAACTGCCGAGCAGATGCGGTTTCGCGTAAAACTCTTTCACCTCTGGCACTT
GTTCCGGCGTCCGCTGACGCTCGGTGTTCGCGGCGTGGTCTTCGATCAGCAGCGGCGTGAGGTGTTCCTGGTGAAGCACA
CCTATGTGGGCGGCTGGCATCTGCCCGGAGGCGGGGTCGAACCGGGCGAGACCATGCTTTCCTGCCTTGCCCGAGAACTT
CAGGAGGAAGGCAATATCGTGCTCACCGGAGCGCCGCAGCTCAAGTCTATCCATTTTAACGGCAAGGCGAGCCGTCGTGA
TCACGTGGCGATCTATCTGATTACGCAATTCGCGCAGACCGCTCCGCGCAAGCCCGATCTGGAAATCGCGGATGCCCGGT
TCTTTCCGCTCGATGCGTTGCCTGAGGGAACGACGGAGGGCACCCGCCGCCGCCTCGGCGAGATTTTCAGCGATTTGGAA
GTTTCGGCAGATTGGTAG

Upstream 100 bases:

>100_bases
CGGGAAGGGGGCCCAAATGGATATCGGAAAAATGTGCCAATCGAAACATGATGTTTCTGTAAAACACCCCGTCGCGGCTT
ACCAGCCCTAAGAGAATTCG

Downstream 100 bases:

>100_bases
CGGTTCCCTAGTCTCAGAGGGGGAGGGGTATGTTCAAGCAGCTTTGGCAAACCTTTCCCGGTCATGCGGCACGGCAAAGT
CAAGCTCGGGGCCCAGCGGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; Hydrolase Protein MutT/Nudix Family; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLAREL
QEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLE
VSADW

Sequences:

>Translated_165_residues
MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLAREL
QEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLE
VSADW
>Mature_164_residues
PSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWHLPGGGVEPGETMLSCLARELQ
EEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQTAPRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEV
SADW

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18716; Mature: 18584

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEEEEEEEECCEE
LPGGGVEPGETMLSCLARELQEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQT
CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEHHHHH
APRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEVSADW
CCCCCCCEECCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSPAHAETRTAEQMRFRVKLFHLWHLFRRPLTLGVRGVVFDQQRREVFLVKHTYVGGWH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEECCCCCEEEEEEEEEECCEE
LPGGGVEPGETMLSCLARELQEEGNIVLTGAPQLKSIHFNGKASRRDHVAIYLITQFAQT
CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCEEEEEEEHHHHH
APRKPDLEIADARFFPLDALPEGTTEGTRRRLGEIFSDLEVSADW
CCCCCCCEECCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA