| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634532
Identifier: 110634532
GI number: 110634532
Start: 2334192
End: 2335049
Strand: Direct
Name: 110634532
Synonym: Meso_2183
Alternate gene names: NA
Gene position: 2334192-2335049 (Clockwise)
Preceding gene: 110634531
Following gene: 110634534
Centisome position: 52.9
GC content: 58.16
Gene sequence:
>858_bases ATGCCTGCCAAAGCCTTTTGGGCGGCCGTTCCGCTGGCCGTAACGATGATTGCTATACCTGTGACGGCGCAGGAGAGTGA GCCTCCGGCGATGAAGTCGGAGGTCATCGAGGTCTTCGCAATTCCTGAAGCCAACCAGGGCATTGGGGTCGATGCCGAGC ATTTTTACGCCATCGACAACACGGTGATCGCCAAGTATTCCAAGGGCAACAAGACGCTCGTCAAGTCGGTCAACTACGAG GACAGGGGCGCGATCCATTTCGATAGCGCCGCCATTGTCGACGGCAGGATTTACGTCGCGCACTCGAACTATTCGACCTG GCCAATGACTAGCTCCCTCGAAATATTCGACGCCGCGACGTTGGATCACGTGGACAGCTACAGTTTCGGCATCCAGCTCG GATCCTTCACCTGGATCGACCGGGCTCCTGATGGTTCCTGGTGGGGCGGCTTCGCCAATTACAATCGCGTCTTCGACAAG AGCCCTGTCGCTTACGGCAACAAGTTCAACACCCAGGTGGTGCGCTTCACACCGGATTGGGAGATAGCGGAGCAATATGT CATTCCCGACGCGATAGTCGAAAAGTTTGATGATATGTCGAATTCCGGCGGCTCCTGGGGACCGGACGGCAATCTATACC TGAGCGGTCACGATCCGGCCGAAGCTTACGTCATGCAGGTGCCCGAAATCGGCTCGACCCTCAAATGGCTTGCCACCGTC CCCCTCGAAATCCGCGGTCAGGGCATCGCTTGGGATCGCTCGCAGCCTGGCGTCCTTTACGGCATCGTCCGCGGCAAGGG CGATGAAGAGAACCGCGTCAGCGTCAACCGGGTCGAGATCGAGAACCTCGGGCAATAG
Upstream 100 bases:
>100_bases CTTCAGATATCTGCTCCAGCGTCACACCGGCTTCATCGACCATTTCTAACCTAGCCGGGTTGAGGGTGCCCCACCGGGTG CGGAAAATCTGGAGAACAAC
Downstream 100 bases:
>100_bases GCGGCGAAGTGGGTTAGCCCACTTGCTTTAATAGCTTTTCCATCGGTGGAGGTGAGGCAAGCGGTATGGCAGGCCCCCGC CTTGACATCGCCTCATGCAT
Product: putative cycloisomerase
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MPAKAFWAAVPLAVTMIAIPVTAQESEPPAMKSEVIEVFAIPEANQGIGVDAEHFYAIDNTVIAKYSKGNKTLVKSVNYE DRGAIHFDSAAIVDGRIYVAHSNYSTWPMTSSLEIFDAATLDHVDSYSFGIQLGSFTWIDRAPDGSWWGGFANYNRVFDK SPVAYGNKFNTQVVRFTPDWEIAEQYVIPDAIVEKFDDMSNSGGSWGPDGNLYLSGHDPAEAYVMQVPEIGSTLKWLATV PLEIRGQGIAWDRSQPGVLYGIVRGKGDEENRVSVNRVEIENLGQ
Sequences:
>Translated_285_residues MPAKAFWAAVPLAVTMIAIPVTAQESEPPAMKSEVIEVFAIPEANQGIGVDAEHFYAIDNTVIAKYSKGNKTLVKSVNYE DRGAIHFDSAAIVDGRIYVAHSNYSTWPMTSSLEIFDAATLDHVDSYSFGIQLGSFTWIDRAPDGSWWGGFANYNRVFDK SPVAYGNKFNTQVVRFTPDWEIAEQYVIPDAIVEKFDDMSNSGGSWGPDGNLYLSGHDPAEAYVMQVPEIGSTLKWLATV PLEIRGQGIAWDRSQPGVLYGIVRGKGDEENRVSVNRVEIENLGQ >Mature_284_residues PAKAFWAAVPLAVTMIAIPVTAQESEPPAMKSEVIEVFAIPEANQGIGVDAEHFYAIDNTVIAKYSKGNKTLVKSVNYED RGAIHFDSAAIVDGRIYVAHSNYSTWPMTSSLEIFDAATLDHVDSYSFGIQLGSFTWIDRAPDGSWWGGFANYNRVFDKS PVAYGNKFNTQVVRFTPDWEIAEQYVIPDAIVEKFDDMSNSGGSWGPDGNLYLSGHDPAEAYVMQVPEIGSTLKWLATVP LEIRGQGIAWDRSQPGVLYGIVRGKGDEENRVSVNRVEIENLGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31391; Mature: 31260
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKAFWAAVPLAVTMIAIPVTAQESEPPAMKSEVIEVFAIPEANQGIGVDAEHFYAIDN CCCHHHHHHHHHEEEEEEEEEECCCCCCCHHHHCEEEEEECCCCCCCCCCCHHHEEEECC TVIAKYSKGNKTLVKSVNYEDRGAIHFDSAAIVDGRIYVAHSNYSTWPMTSSLEIFDAAT EEEEEECCCCEEEEEECCCCCCCCEEECCEEEECCEEEEEECCCCCCCCCCCCEEEECHH LDHVDSYSFGIQLGSFTWIDRAPDGSWWGGFANYNRVFDKSPVAYGNKFNTQVVRFTPDW HHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCH EIAEQYVIPDAIVEKFDDMSNSGGSWGPDGNLYLSGHDPAEAYVMQVPEIGSTLKWLATV HHHHHEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEEEC PLEIRGQGIAWDRSQPGVLYGIVRGKGDEENRVSVNRVEIENLGQ CEEECCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure PAKAFWAAVPLAVTMIAIPVTAQESEPPAMKSEVIEVFAIPEANQGIGVDAEHFYAIDN CCHHHHHHHHHEEEEEEEEEECCCCCCCHHHHCEEEEEECCCCCCCCCCCHHHEEEECC TVIAKYSKGNKTLVKSVNYEDRGAIHFDSAAIVDGRIYVAHSNYSTWPMTSSLEIFDAAT EEEEEECCCCEEEEEECCCCCCCCEEECCEEEECCEEEEEECCCCCCCCCCCCEEEECHH LDHVDSYSFGIQLGSFTWIDRAPDGSWWGGFANYNRVFDKSPVAYGNKFNTQVVRFTPDW HHCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCH EIAEQYVIPDAIVEKFDDMSNSGGSWGPDGNLYLSGHDPAEAYVMQVPEIGSTLKWLATV HHHHHEECCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCEEEEEEC PLEIRGQGIAWDRSQPGVLYGIVRGKGDEENRVSVNRVEIENLGQ CEEECCCCEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA