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The map label for this gene is yfbS [C]

Identifier: 110634511

GI number: 110634511

Start: 2311265

End: 2313037

Strand: Reverse

Name: yfbS [C]

Synonym: Meso_2162

Alternate gene names: 110634511

Gene position: 2313037-2311265 (Counterclockwise)

Preceding gene: 110634512

Following gene: 110634505

Centisome position: 52.42

GC content: 63.96

Gene sequence:

>1773_bases
TTGAGTTACCAGCAGATCTTCATCTTCGCACTGTTGGGCGCGGTGTTCGGCTTTCTGGTGTGGGGAAAGATCCGCTATGA
CCTGGTCGCCTTTACCGCCCTCATCGTCGGCGTGATGGGCGGTGCGGTCGAGCCCGGCGATGCGTTTGCCGGGTTCGGCC
ACGAGACAACGCTGATCGTCGCCTTCGTGCTGATCGTCTCGCGCGCGATGATCAATGCCGGAGTGGTCGAGATGATCGCC
CGGTATGTCATCTCGGCCTCTCGCTCGCTGTCGGCCCATATCGGCGTGATGGCTGTGATAGGCGCGGCGCTGTCGGCCAT
CATCAACAATGTCGCGGCCATCGCAATCCTGATGTCGCTCGACATCGAGGCGGCGAAGAAGGCCCAACGCTCTCCCTCGC
TCTCGCTAATGCCGTTGTCCTACGCCACTATTCTCGGCGGCATGGTGACGATGATCGGGACACCGTCCAACATCGTTATT
GCGCAGTTCCGAGAGCGTGCTCTCGGCGAGCCCTATTCGATGTTCTCCTTCACGCCGGTCGGCCTGGTCGTCGCCGTCGC
CGGCATTGCCTTTGTGGCGCTGGCCGGCTGGCGCGTCATCCCGCAACGCGAAGGCCAGGCAACGGCCACGCTCGAACCAG
AAAGCGACCTGTTCGTTGCCGAGGCGCAGGTTCCAGAAAACTCCGAGGCGATCGGCAAGACCACCGGTGATTTCGCCGAA
CTGGGCGACGAGCATGACGTTACCGTGCTTGGGCTGGTCCGCGGCGGCAAACGCCTCGCTGGCTTTGCCAGGCGCGAGAC
GATCCGCAAGGGCGACTTCCTTGTGCTCGAAGGCGAGCCTGCTGCCGTCGAGGCCTTCGCCGGCGCGGCGAAGCTCGATC
TGTCCGGACAGGATGAGCATGGCGGGTTGACGGGTAAGTCGATGAGTCTGGTCGAAGCGATTGTGCCGGAAACGGGCCGC
GCCGTCGGCCGCTCGGCAATGGACCTCCGCCTGCTCGCCAATCGTGGCGTGACCCTCATTGGCGTTTCAAGGCGAGGTAA
AAGGTTCCGGGAGAGGGTGCGCAAGCTGACGCTCCAGCCGGGCGACGTACTGCTCCTGCTCGGGCCCGAGCGGCGGCTTT
CGCAGGCCACGGAATGGCTGGGCGTCCTGCCCCTTGCCGACAGGCAGCATACCGTCATCCAACGGCGCAAGGCGTTGCTC
GCCATCGGCATTTTCGTTGCCGGTGTGGGCGCCTCTGTCGCCGGCCTTGTCACGCTGTCAATCGCGCTCGCCTGCGTCGT
AGCGGCCTATGCGATGGTCAGCATTGTTAATGCGCGCGAGATCTACGAATCGGTGGACTGGCCGGTGATCGTGCTGCTCG
GCTCGCTCATTCCGCTCGGCGTGGCGTTCGACGAGGCCGGCGGAACCGAACTCATCACCGCCGCCATTGTCGGCCAGACT
GACGGGCTTCCCGCCTGGATGATCCTCGCTGTCGTCATGATGGTCACGATGGTGCTTTCCGATTTCCTGAATTCGATCGC
CACCTCCCTGATTGCCGCTCCGATCGCAGTCGGTGTGGCCCAGGGTGTGGGCGCATCGCCCGACGCCTTCCTGATGGGCG
TGGCTGTTGCCGCGACCTGCGGCTTCCTCACGCCGATCGGCCACAAGAACAACACCATCATCATGGGCCCTGGCGGCTAC
CGTTTCGGCGATTACTGGCGCCTCGGCGCGCCGCTGGAAATTCTCACCATTGCCGTCGCAGTCCCGGCGACGCTATTCTT
CTGGCCGGTGTAG

Upstream 100 bases:

>100_bases
TCACAACAGCATTTGTGACGCGATCGCGGCGATAATGATCCCGATCCGATCACTGCAAATCTGAAACTCGGCCCGCGTGT
TCTATACGAAAGGGAGGCGG

Downstream 100 bases:

>100_bases
AGAAGGCCCATCCGCCGCCTTGAACAGGGTCCTTCTACACGACCTTCAGGAGGACGGCGCTTTCGAATTCCAGTACTGCC
TCGCCGCGGCTGTTGAAGGC

Product: TrkA-C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MSYQQIFIFALLGAVFGFLVWGKIRYDLVAFTALIVGVMGGAVEPGDAFAGFGHETTLIVAFVLIVSRAMINAGVVEMIA
RYVISASRSLSAHIGVMAVIGAALSAIINNVAAIAILMSLDIEAAKKAQRSPSLSLMPLSYATILGGMVTMIGTPSNIVI
AQFRERALGEPYSMFSFTPVGLVVAVAGIAFVALAGWRVIPQREGQATATLEPESDLFVAEAQVPENSEAIGKTTGDFAE
LGDEHDVTVLGLVRGGKRLAGFARRETIRKGDFLVLEGEPAAVEAFAGAAKLDLSGQDEHGGLTGKSMSLVEAIVPETGR
AVGRSAMDLRLLANRGVTLIGVSRRGKRFRERVRKLTLQPGDVLLLLGPERRLSQATEWLGVLPLADRQHTVIQRRKALL
AIGIFVAGVGASVAGLVTLSIALACVVAAYAMVSIVNAREIYESVDWPVIVLLGSLIPLGVAFDEAGGTELITAAIVGQT
DGLPAWMILAVVMMVTMVLSDFLNSIATSLIAAPIAVGVAQGVGASPDAFLMGVAVAATCGFLTPIGHKNNTIIMGPGGY
RFGDYWRLGAPLEILTIAVAVPATLFFWPV

Sequences:

>Translated_590_residues
MSYQQIFIFALLGAVFGFLVWGKIRYDLVAFTALIVGVMGGAVEPGDAFAGFGHETTLIVAFVLIVSRAMINAGVVEMIA
RYVISASRSLSAHIGVMAVIGAALSAIINNVAAIAILMSLDIEAAKKAQRSPSLSLMPLSYATILGGMVTMIGTPSNIVI
AQFRERALGEPYSMFSFTPVGLVVAVAGIAFVALAGWRVIPQREGQATATLEPESDLFVAEAQVPENSEAIGKTTGDFAE
LGDEHDVTVLGLVRGGKRLAGFARRETIRKGDFLVLEGEPAAVEAFAGAAKLDLSGQDEHGGLTGKSMSLVEAIVPETGR
AVGRSAMDLRLLANRGVTLIGVSRRGKRFRERVRKLTLQPGDVLLLLGPERRLSQATEWLGVLPLADRQHTVIQRRKALL
AIGIFVAGVGASVAGLVTLSIALACVVAAYAMVSIVNAREIYESVDWPVIVLLGSLIPLGVAFDEAGGTELITAAIVGQT
DGLPAWMILAVVMMVTMVLSDFLNSIATSLIAAPIAVGVAQGVGASPDAFLMGVAVAATCGFLTPIGHKNNTIIMGPGGY
RFGDYWRLGAPLEILTIAVAVPATLFFWPV
>Mature_589_residues
SYQQIFIFALLGAVFGFLVWGKIRYDLVAFTALIVGVMGGAVEPGDAFAGFGHETTLIVAFVLIVSRAMINAGVVEMIAR
YVISASRSLSAHIGVMAVIGAALSAIINNVAAIAILMSLDIEAAKKAQRSPSLSLMPLSYATILGGMVTMIGTPSNIVIA
QFRERALGEPYSMFSFTPVGLVVAVAGIAFVALAGWRVIPQREGQATATLEPESDLFVAEAQVPENSEAIGKTTGDFAEL
GDEHDVTVLGLVRGGKRLAGFARRETIRKGDFLVLEGEPAAVEAFAGAAKLDLSGQDEHGGLTGKSMSLVEAIVPETGRA
VGRSAMDLRLLANRGVTLIGVSRRGKRFRERVRKLTLQPGDVLLLLGPERRLSQATEWLGVLPLADRQHTVIQRRKALLA
IGIFVAGVGASVAGLVTLSIALACVVAAYAMVSIVNAREIYESVDWPVIVLLGSLIPLGVAFDEAGGTELITAAIVGQTD
GLPAWMILAVVMMVTMVLSDFLNSIATSLIAAPIAVGVAQGVGASPDAFLMGVAVAATCGFLTPIGHKNNTIIMGPGGYR
FGDYWRLGAPLEILTIAVAVPATLFFWPV

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=620, Percent_Identity=25.3225806451613, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61907; Mature: 61775

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQQIFIFALLGAVFGFLVWGKIRYDLVAFTALIVGVMGGAVEPGDAFAGFGHETTLIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
AFVLIVSRAMINAGVVEMIARYVISASRSLSAHIGVMAVIGAALSAIINNVAAIAILMSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIEAAKKAQRSPSLSLMPLSYATILGGMVTMIGTPSNIVIAQFRERALGEPYSMFSFTPV
CHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCHH
GLVVAVAGIAFVALAGWRVIPQREGQATATLEPESDLFVAEAQVPENSEAIGKTTGDFAE
HHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH
LGDEHDVTVLGLVRGGKRLAGFARRETIRKGDFLVLEGEPAAVEAFAGAAKLDLSGQDEH
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCEEEECCCCCCC
GGLTGKSMSLVEAIVPETGRAVGRSAMDLRLLANRGVTLIGVSRRGKRFRERVRKLTLQP
CCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC
GDVLLLLGPERRLSQATEWLGVLPLADRQHTVIQRRKALLAIGIFVAGVGASVAGLVTLS
CCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALACVVAAYAMVSIVNAREIYESVDWPVIVLLGSLIPLGVAFDEAGGTELITAAIVGQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCC
DGLPAWMILAVVMMVTMVLSDFLNSIATSLIAAPIAVGVAQGVGASPDAFLMGVAVAATC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GFLTPIGHKNNTIIMGPGGYRFGDYWRLGAPLEILTIAVAVPATLFFWPV
HHHCCCCCCCCEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYQQIFIFALLGAVFGFLVWGKIRYDLVAFTALIVGVMGGAVEPGDAFAGFGHETTLIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
AFVLIVSRAMINAGVVEMIARYVISASRSLSAHIGVMAVIGAALSAIINNVAAIAILMSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIEAAKKAQRSPSLSLMPLSYATILGGMVTMIGTPSNIVIAQFRERALGEPYSMFSFTPV
CHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCHH
GLVVAVAGIAFVALAGWRVIPQREGQATATLEPESDLFVAEAQVPENSEAIGKTTGDFAE
HHHHHHHHHHHHHHHCCEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH
LGDEHDVTVLGLVRGGKRLAGFARRETIRKGDFLVLEGEPAAVEAFAGAAKLDLSGQDEH
CCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCEEEECCCCCCC
GGLTGKSMSLVEAIVPETGRAVGRSAMDLRLLANRGVTLIGVSRRGKRFRERVRKLTLQP
CCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC
GDVLLLLGPERRLSQATEWLGVLPLADRQHTVIQRRKALLAIGIFVAGVGASVAGLVTLS
CCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALACVVAAYAMVSIVNAREIYESVDWPVIVLLGSLIPLGVAFDEAGGTELITAAIVGQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCC
DGLPAWMILAVVMMVTMVLSDFLNSIATSLIAAPIAVGVAQGVGASPDAFLMGVAVAATC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
GFLTPIGHKNNTIIMGPGGYRFGDYWRLGAPLEILTIAVAVPATLFFWPV
HHHCCCCCCCCEEEECCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]