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The map label for this gene is ycbL [H]

Identifier: 110634487

GI number: 110634487

Start: 2292429

End: 2293076

Strand: Reverse

Name: ycbL [H]

Synonym: Meso_2138

Alternate gene names: 110634487

Gene position: 2293076-2292429 (Counterclockwise)

Preceding gene: 110634488

Following gene: 110634482

Centisome position: 51.97

GC content: 62.65

Gene sequence:

>648_bases
ATGAGCACGCTCAGAGCCGGCATTGTCCCCGTCACCCCATTTCAGCAGAACTGCACGATCCTCTTCGATGAGGAGGAGAA
GCGCGGAATTGTGGTCGATCCCGGCGGCGAGGTAGATCGCATCCGTGCTGCGATCGAGCAGAACGGCCTTACAATCGAAG
CGATCTGGCTGACCCATGGTCATATCGATCACGCCGGCGGCGCCATGGATCTGAAGGACGCTCTCGGCGTGGAAATCCTG
GGGCCGCACGAGGCCGAACGCGACCTGCTTCTCAATCTGGCCGCCCAGGGCAGGATGTTCGGGCTTGCCGAGCCGGTGCG
CGATGTCACGCCGGACCGGTTCCTGAATGAAGGAGATGTGGTCTCCTTCGCCGGCCATTCCTTTAAAGTGTTCCACTGCC
CGGGCCATTCGCCAGGGCACGTCGTTTTCTACAATGACGCGGCGAAGTTCGCCCATGTGGGCGACGTGCTCTTTCAGGGC
TCGATCGGCCGCACCGATCTTCCGGGCGGCGACCACGCCGCCCTCATCCGCTCCATCAAGGACAAGCTGCTGCCGCTGGG
CGACGATATCGGCTTTCTCTGCGGTCATGGCCCCGGCGGGCGCTTCGGGGGAGAACGGCGGACAAATCCGTTTCTCATAG
GGCAGTAG

Upstream 100 bases:

>100_bases
GAGCAGTAGGGCGGTAGAGGCCTCCCGTTTCGATTGCTAACTACCCTGTTTCCCAAAATTCCCCTTTGCCGCGCCGCGCT
GATCCTTTATTCCCTTGCCT

Downstream 100 bases:

>100_bases
CGGGAAGGGCAGCAGGGATGTAAGGGAGCGTCCCTACTGCCTATCGATTGCTGGCCCAGCGGGTCGGCCTCTAGACCGAA
GTGCTTTCGGACGCCTGATC

Product: beta-lactamase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSTLRAGIVPVTPFQQNCTILFDEEEKRGIVVDPGGEVDRIRAAIEQNGLTIEAIWLTHGHIDHAGGAMDLKDALGVEIL
GPHEAERDLLLNLAAQGRMFGLAEPVRDVTPDRFLNEGDVVSFAGHSFKVFHCPGHSPGHVVFYNDAAKFAHVGDVLFQG
SIGRTDLPGGDHAALIRSIKDKLLPLGDDIGFLCGHGPGGRFGGERRTNPFLIGQ

Sequences:

>Translated_215_residues
MSTLRAGIVPVTPFQQNCTILFDEEEKRGIVVDPGGEVDRIRAAIEQNGLTIEAIWLTHGHIDHAGGAMDLKDALGVEIL
GPHEAERDLLLNLAAQGRMFGLAEPVRDVTPDRFLNEGDVVSFAGHSFKVFHCPGHSPGHVVFYNDAAKFAHVGDVLFQG
SIGRTDLPGGDHAALIRSIKDKLLPLGDDIGFLCGHGPGGRFGGERRTNPFLIGQ
>Mature_214_residues
STLRAGIVPVTPFQQNCTILFDEEEKRGIVVDPGGEVDRIRAAIEQNGLTIEAIWLTHGHIDHAGGAMDLKDALGVEILG
PHEAERDLLLNLAAQGRMFGLAEPVRDVTPDRFLNEGDVVSFAGHSFKVFHCPGHSPGHVVFYNDAAKFAHVGDVLFQGS
IGRTDLPGGDHAALIRSIKDKLLPLGDDIGFLCGHGPGGRFGGERRTNPFLIGQ

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=205, Percent_Identity=51.7073170731707, Blast_Score=223, Evalue=5e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23116; Mature: 22984

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLRAGIVPVTPFQQNCTILFDEEEKRGIVVDPGGEVDRIRAAIEQNGLTIEAIWLTHG
CCCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEEEECC
HIDHAGGAMDLKDALGVEILGPHEAERDLLLNLAAQGRMFGLAEPVRDVTPDRFLNEGDV
CCCCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHCCHHHHCCCCCE
VSFAGHSFKVFHCPGHSPGHVVFYNDAAKFAHVGDVLFQGSIGRTDLPGGDHAALIRSIK
EEECCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHH
DKLLPLGDDIGFLCGHGPGGRFGGERRTNPFLIGQ
HHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
STLRAGIVPVTPFQQNCTILFDEEEKRGIVVDPGGEVDRIRAAIEQNGLTIEAIWLTHG
CCCCCCCEECCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEEEECC
HIDHAGGAMDLKDALGVEILGPHEAERDLLLNLAAQGRMFGLAEPVRDVTPDRFLNEGDV
CCCCCCCCCCHHHHCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHHHCCHHHHCCCCCE
VSFAGHSFKVFHCPGHSPGHVVFYNDAAKFAHVGDVLFQGSIGRTDLPGGDHAALIRSIK
EEECCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHEEECCCCCCCCCCCCHHHHHHHHH
DKLLPLGDDIGFLCGHGPGGRFGGERRTNPFLIGQ
HHHCCCCCCCCEEECCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]